Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.08G159600 Carya illinoinensis HOM05D007682 ORTHO05D009690 8.2e-36 154.5 116 100.0
Haze_04118 Corylus avellana HOM05D007682 ORTHO05D009690 4.8e-28 128.6 106 69.8
Hma1.2p1_0472F.1_g159680 Hydrangea macrophylla HOM05D007682 ORTHO05D009690 1.7e-25 120.2 105 83.8
Manes.08G115600 Manihot esculenta HOM05D007682 ORTHO05D009690 2.5e-24 116.3 105 79.0
QL03p019528 Quercus lobata HOM05D007682 ORTHO05D009690 1.6e-23 113.6 62 93.5
Cfa006654 Carpinus fangiana HOM05D007682 ORTHO05D009690 3.6e-23 112.5 63 92.1
GSVIVG01031165001 Vitis vinifera HOM05D000036 ORTHO05D000441 6.7e-22 108.2 103 81.6
PSO407G0292 Papaver somniferum HOM05D007682 ORTHO05D009690 1.5e-21 107.1 103 78.6
TAR633G0769 Trochodendron aralioides HOM05D007682 ORTHO05D009690 3.7e-20 102.4 63 81.0
Prupe.8G021600 Prunus persica HOM05D007682 ORTHO05D009690 4.8e-20 102.1 63 82.5
PGR031G1366 Punica granatum HOM05D007682 ORTHO05D009690 4.8e-20 102.1 63 82.5
RcHm_v2.0_Chr6g0276771 Rosa chinensis HOM05D007682 ORTHO05D009690 4.8e-20 102.1 63 82.5
Gohir.A08G208100 Gossypium hirsutum HOM05D007682 ORTHO05D009690 6.3e-20 101.7 63 82.5
Eucgr.H03256 Eucalyptus grandis HOM05D007682 ORTHO05D009690 8.2e-20 101.3 63 81.0
Peaxi162Scf00037g01515 Petunia axillaris HOM05D007682 ORTHO05D009690 8.2e-20 101.3 61 85.2
CSS0049840 Camellia sinensis var. sinensis HOM05D007682 ORTHO05D009690 1.1e-19 100.9 63 81.0
Gorai.007G301900 Gossypium raimondii HOM05D007682 ORTHO05D009690 1.1e-19 100.9 63 82.5
FAN20G0672 Fragaria x ananassa HOM05D007682 ORTHO05D009690 1.4e-19 100.5 63 81.0
FAN24G1339 Fragaria x ananassa HOM05D007682 ORTHO05D009690 1.4e-19 100.5 63 81.0
Glyma.19G231600 Glycine max HOM05D007682 ORTHO05D009690 1.8e-19 100.1 62 82.3
THA.LOC104821730 Tarenaya hassleriana HOM05D007682 ORTHO05D009690 2.4e-19 99.8 99 81.8
Cc02_g34370 Coffea canephora HOM05D007682 ORTHO05D009690 3.1e-19 99.4 105 75.2
Gohir.D11G279700 Gossypium hirsutum HOM05D007682 ORTHO05D009690 3.1e-19 99.4 63 81.0
MD10G1017700 Malus domestica HOM05D007682 ORTHO05D009690 3.1e-19 99.4 62 82.3
Nitab4.5_0003113g0070 Nicotiana tabacum HOM05D007682 ORTHO05D009690 3.1e-19 99.4 61 83.6
CAN.G1273.42 Capsicum annuum HOM05D007682 ORTHO05D009690 4.1e-19 99.0 105 77.1
Gohir.A11G269500 Gossypium hirsutum HOM05D007682 ORTHO05D009690 4.1e-19 99.0 63 81.0
Medtr7g112600 Medicago truncatula HOM05D007682 ORTHO05D009690 5.3e-19 98.6 61 83.6
Psat3g011680 Pisum sativum HOM05D007682 ORTHO05D009690 5.3e-19 98.6 61 83.6
arahy.Tifrunner.gnm1.ann1.P6132C Arachis hypogaea HOM05D007682 ORTHO05D009690 6.9e-19 98.2 62 80.6
Glyma.03G234200 Glycine max HOM05D007682 ORTHO05D009690 6.9e-19 98.2 62 80.6
Thecc.05G315600 Theobroma cacao HOM05D007682 ORTHO05D009690 6.9e-19 98.2 63 81.0
Potri.005G023000 Populus trichocarpa HOM05D007682 ORTHO05D009690 9.1e-19 97.8 63 79.4
THA.LOC104818730 Tarenaya hassleriana HOM05D007682 ORTHO05D009690 9.1e-19 97.8 63 77.8
BcaNung04745 Brassica carinata HOM05D007682 ORTHO05D009690 1.2e-18 97.4 59 84.7
AUR62000737 Chenopodium quinoa HOM05D007682 ORTHO05D009690 1.2e-18 97.4 62 75.8
Nn4g25761 Nelumbo nucifera HOM05D007682 ORTHO05D009690 1.2e-18 97.4 62 80.6
Oeu010924.1 Olea europaea HOM05D007682 ORTHO05D009690 1.2e-18 97.4 99 79.8
PSO170G1207 Papaver somniferum HOM05D007682 ORTHO05D009690 1.2e-18 97.4 61 80.3
TPR.G1619 Trifolium pratense HOM05D007682 ORTHO05D009690 1.2e-18 97.4 61 82.0
Migut.N02098 Erythranthe guttata HOM05D007682 ORTHO05D009690 1.5e-18 97.1 61 82.0
FAN15G0817 Fragaria x ananassa HOM05D007682 ORTHO05D009690 1.5e-18 97.1 63 79.4
Phvul.006G088300 Phaseolus vulgaris HOM05D007682 ORTHO05D009690 1.5e-18 97.1 62 79.0
Solyc01g099930.3 Solanum lycopersicum HOM05D007682 ORTHO05D009690 1.5e-18 97.1 63 79.4
Gohir.D08G224900 Gossypium hirsutum HOM05D007682 ORTHO05D009690 2.0e-18 96.7 62 79.0
arahy.Tifrunner.gnm1.ann1.S47DRU Arachis hypogaea HOM05D007682 ORTHO05D009690 2.6e-18 96.3 61 80.3
DCAR_022138 Daucus carota HOM05D007682 ORTHO05D009690 3.4e-18 95.9 63 76.2
Duzib177G0692 Durio zibethinus HOM05D007682 ORTHO05D009690 3.4e-18 95.9 59 83.1
Lsat_1_v5_gn_7_72960 Lactuca sativa HOM05D007682 ORTHO05D009690 3.4e-18 95.9 63 77.8
Actinidia21502 Actinidia chinensis HOM05D007682 ORTHO05D009690 4.5e-18 95.5 62 79.0
A06p37270 Brassica napus HOM05D007682 ORTHO05D009690 4.5e-18 95.5 59 83.1
C07p41180 Brassica napus HOM05D007682 ORTHO05D009690 4.5e-18 95.5 59 83.1
BolC7t44646H Brassica oleracea HOM05D007682 ORTHO05D009690 4.5e-18 95.5 59 83.1
BraA06t26650Z Brassica rapa HOM05D007682 ORTHO05D009690 4.5e-18 95.5 59 83.1
ECA236G4368 Erigeron canadensis HOM05D000036 ORTHO05D000441 4.5e-18 95.5 63 76.2
AUR62005227 Chenopodium quinoa HOM05D007682 ORTHO05D009690 5.9e-18 95.1 62 72.6
Sp2g20980 Schrenkiella parvula HOM05D007682 ORTHO05D009690 5.9e-18 95.1 59 83.1
Atru.chr2.100 Acer truncatum HOM05D007682 ORTHO05D009690 7.7e-18 94.7 63 77.8
Gorai.004G238900 Gossypium raimondii HOM05D007682 ORTHO05D009690 7.7e-18 94.7 62 77.4
CARHR186340 Cardamine hirsuta HOM05D007682 ORTHO05D009690 1.0e-17 94.4 59 83.1
Lalb_Chr15g0077471 Lupinus albus HOM05D007682 ORTHO05D009690 1.0e-17 94.4 61 80.3
Os12g0516700 Oryza sativa ssp. japonica HOM05D007682 ORTHO05D009690 1.0e-17 94.4 61 77.0
Os12g0554000 Oryza sativa ssp. japonica HOM05D007682 ORTHO05D009690 1.0e-17 94.4 61 77.0
Sed0011876 Sechium edule HOM05D007682 ORTHO05D009690 1.0e-17 94.4 62 77.4
SGA_v2.0_scaffold81G26104 Striga asiatica HOM05D007682 ORTHO05D009690 1.0e-17 94.4 63 74.6
Aa31LG11G9610 Aethionema arabicum HOM05D007682 ORTHO05D009690 1.3e-17 94.0 59 81.4
HanXRQChr11g0340111 Helianthus annuus HOM05D007682 ORTHO05D009690 1.7e-17 93.6 63 76.2
SMO367G0406 Selaginella moellendorffii HOM05D007682 ORTHO05D009690 1.7e-17 93.6 61 75.4
CDE11G0615 Ceratophyllum demersum HOM05D007682 ORTHO05D009690 2.2e-17 93.2 61 75.4
AT5G27860 Arabidopsis thaliana HOM05D007682 ORTHO05D009690 2.9e-17 92.8 59 81.4
Sabra05G0029000 Salix brachista HOM05D007682 ORTHO05D009690 2.9e-17 92.8 62 77.4
TWI56G1223 Tripterygium wilfordii HOM05D007682 ORTHO05D009690 2.9e-17 92.8 105 73.3
HPP92_010663 Vanilla planifolia HOM05D007682 ORTHO05D009690 2.9e-17 92.8 106 65.1
MSTRG.27972 Avicennia marina HOM05D007682 ORTHO05D009690 3.8e-17 92.4 105 74.3
Lj1g0016295 Lotus japonicus HOM05D007682 ORTHO05D009690 3.8e-17 92.4 110 72.7
SEGI_39810 Sequoiadendron giganteum HOM05D007682 ORTHO05D009690 5.0e-17 92.0 59 76.3
CDE05G1347 Ceratophyllum demersum HOM05D007682 ORTHO05D009690 6.5e-17 91.7 58 77.6
Dinv30837 Davidia involucrata HOM05D007682 ORTHO05D009690 6.5e-17 91.7 63 73.0
Sc16g0008750 Simmondsia chinensis HOM05D000036 ORTHO05D001038 6.5e-17 91.7 62 72.6
CsaV3_1G038640 Cucumis sativus L. HOM05D007682 ORTHO05D009690 2.5e-16 89.7 61 75.4
CSS0031357 Camellia sinensis var. sinensis HOM05D007682 ORTHO05D009690 9.4e-16 87.8 63 69.8
Zm00001eb410110 Zea mays HOM05D007682 ORTHO05D009690 7.9e-15 84.7 63 69.8
AL6G39080 Arabidopsis lyrata HOM05D007682 ORTHO05D009690 3.0e-14 82.8 59 74.6
Nitab4.5_0003497g0050 Nicotiana tabacum HOM05D007682 ORTHO05D009690 3.0e-14 82.8 52 80.8
MBI19_g44105_MAGBIO Magnolia biondii HOM05D007682 ORTHO05D009690 5.1e-14 82.0 54 74.1
unitig_699.g19250 Utricularia gibba HOM05D007682 ORTHO05D009690 5.1e-14 82.0 103 64.1
Ah.06g189950 Amaranthus hybridus HOM05D007682 ORTHO05D009690 2.6e-13 79.7 51 74.5
Hund07111 Selenicereus undatus HOM05D007682 ORTHO05D009690 3.3e-13 79.3 79 55.7
EL10Ac4g09894 Beta vulgaris HOM05D007682 ORTHO05D009690 5.7e-13 78.6 51 72.5
ATR0693G225 Amborella trichopoda HOM05D007682 ORTHO05D009690 2.2e-12 76.6 52 73.1
HPP92_010684 Vanilla planifolia HOM05D007682 ORTHO05D009690 5.3e-11 72.0 61 65.6
DCAR_022140 Daucus carota HOM05D007682 ORTHO05D009690 2.6e-10 69.7 52 67.3
MBI19_g47767_MAGBIO Magnolia biondii HOM05D007682 ORTHO05D009690 3.8e-09 65.9 54 64.8
VMungo0540G1787 Vigna mungo HOM05D007682 ORTHO05D009690 6.7e-06 55.1 32 81.2


User provided reference genes

Program Settings