Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.08G158700 Carya illinoinensis HOM05D007336 ORTHO05D009339 4.5e-62 241.1 124 100.0
Cfa006663 Carpinus fangiana HOM05D007336 ORTHO05D009339 1.3e-53 213.0 122 89.3
GSVIVG01031156001 Vitis vinifera HOM05D007336 ORTHO05D009339 1.1e-52 209.9 121 86.0
TAR362G0973 Trochodendron aralioides HOM05D007336 ORTHO05D009339 7.2e-52 207.2 121 84.3
Prupe.6G317700 Prunus persica HOM05D007336 ORTHO05D009339 1.3e-50 203.0 122 83.6
MD04G1197300 Malus domestica HOM05D007336 ORTHO05D009339 9.7e-49 196.8 120 80.8
Manes.01G127100 Manihot esculenta HOM05D007336 ORTHO05D009339 1.3e-48 196.4 123 78.9
Haze_04108 Corylus avellana HOM05D002548 ORTHO05D003031 1.6e-48 196.1 160 68.8
MD12G1210100 Malus domestica HOM05D007336 ORTHO05D009339 1.6e-48 196.1 120 80.8
MELO3C004210.2 Cucumis melo HOM05D007336 ORTHO05D009339 2.8e-48 195.3 122 82.0
ClCG02G015210 Citrullus lanatus HOM05D007336 ORTHO05D009339 3.7e-48 194.9 122 82.0
Atru.chr1.2192 Acer truncatum HOM05D007336 ORTHO05D009339 1.8e-47 192.6 121 78.5
CANSAT54G2288 Cannabis sativa HOM05D007336 ORTHO05D009339 2.4e-47 192.2 119 81.5
CsaV3_2G006800 Cucumis sativus L. HOM05D007336 ORTHO05D009339 4.1e-47 191.4 122 80.3
Atru.chr1.2191 Acer truncatum HOM05D007336 ORTHO05D009339 1.5e-46 189.5 121 77.7
Potri.005G021800 Populus trichocarpa HOM05D007336 ORTHO05D009339 3.4e-46 188.3 119 77.3
Ciclev10002848m.g Citrus clementina HOM05D007336 ORTHO05D009339 5.9e-46 187.6 123 76.4
Phvul.001G227200 Phaseolus vulgaris HOM05D007336 ORTHO05D009339 1.3e-45 186.4 122 77.0
Lj1g0024848 Lotus japonicus HOM05D007336 ORTHO05D009339 3.8e-45 184.9 121 73.6
Glyma.19G230700 Glycine max HOM05D007336 ORTHO05D009339 6.5e-45 184.1 121 74.4
Psat0s3672g0040 Pisum sativum HOM05D007336 ORTHO05D009339 4.2e-44 181.4 121 74.4
FAN09G1805 Fragaria x ananassa HOM05D007336 ORTHO05D009339 5.5e-44 181.0 120 76.7
FAN14G5314 Fragaria x ananassa HOM05D007336 ORTHO05D009339 5.5e-44 181.0 120 76.7
Aqoxy2G02873 Aquilegia oxysepala HOM05D007336 ORTHO05D009339 7.2e-44 180.6 116 76.7
arahy.Tifrunner.gnm1.ann1.N7WCQ3 Arachis hypogaea HOM05D000001 ORTHO05D010781 4.6e-43 177.9 122 73.0
Duzib128G0390 Durio zibethinus HOM05D007336 ORTHO05D009339 4.6e-43 177.9 122 72.1
arahy.Tifrunner.gnm1.ann1.63GRQU Arachis hypogaea HOM05D007336 ORTHO05D010781 7.9e-43 177.2 122 73.0
FvH4_6g06960 Fragaria vesca HOM05D007336 ORTHO05D009339 7.9e-43 177.2 120 75.8
PGR031G1948 Punica granatum HOM05D007336 ORTHO05D009339 7.9e-43 177.2 116 76.7
COL.COLO4_03798 Corchorus olitorius HOM05D007336 ORTHO05D009339 1.4e-42 176.4 123 71.5
Dinv44340 Davidia involucrata HOM05D007336 ORTHO05D009339 1.4e-42 176.4 122 73.8
Lalb_Chr16g0391581 Lupinus albus HOM05D007336 ORTHO05D009339 1.4e-42 176.4 123 68.3
Actinidia40305 Actinidia chinensis HOM05D007336 ORTHO05D009339 1.8e-42 176.0 123 72.4
FAN05G1709 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.8e-42 176.0 120 75.0
FAN05G3591 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.8e-42 176.0 120 75.0
Gorai.007G303000 Gossypium raimondii HOM05D007336 ORTHO05D009339 1.8e-42 176.0 120 72.5
Thecc.05G317300 Theobroma cacao HOM05D007336 ORTHO05D009339 3.0e-42 175.3 122 70.5
RcHm_v2.0_Chr3g0456501 Rosa chinensis HOM05D007336 ORTHO05D009339 3.9e-42 174.9 120 74.2
vmacro08103 Vaccinium macrocarpon HOM05D007336 ORTHO05D009339 5.1e-42 174.5 122 72.1
QL03p019121 Quercus lobata HOM05D007336 ORTHO05D009339 1.1e-41 173.3 229 48.5
Rhsim04G0227800 Rhododendron simsii HOM05D007336 ORTHO05D009339 1.1e-41 173.3 122 71.3
Gohir.D11G280800 Gossypium hirsutum HOM05D007336 ORTHO05D009339 1.5e-41 172.9 120 71.7
Medtr7g112530 Medicago truncatula HOM05D007336 ORTHO05D009339 7.4e-41 170.6 117 70.1
Dinv29713 Davidia involucrata HOM05D002548 ORTHO05D003031 2.2e-40 169.1 120 73.3
CDE02G0601 Ceratophyllum demersum HOM05D007336 ORTHO05D009339 2.8e-40 168.7 118 70.3
Cc03_g01420 Coffea canephora HOM05D007336 ORTHO05D009339 2.8e-40 168.7 123 67.5
FAN02G4454 Fragaria x ananassa HOM05D007336 ORTHO05D009339 2.8e-40 168.7 130 69.2
Migut.G00122 Erythranthe guttata HOM05D007336 ORTHO05D009339 3.7e-40 168.3 122 66.4
Eucgr.H03266 Eucalyptus grandis HOM05D007336 ORTHO05D009339 3.7e-40 168.3 120 70.8
CSS0001044 Camellia sinensis var. sinensis HOM05D007336 ORTHO05D009339 1.8e-39 166.0 121 68.6
TPR.G39916 Trifolium pratense HOM05D007336 ORTHO05D009339 2.4e-39 165.6 123 67.5
THA.LOC104805904 Tarenaya hassleriana HOM05D007336 ORTHO05D009339 5.3e-39 164.5 110 73.6
MBI18_g25083_MAGBIO Magnolia biondii HOM05D007336 ORTHO05D009339 6.9e-39 164.1 150 58.7
Eucgr.H03264 Eucalyptus grandis HOM05D007336 ORTHO05D009339 9.1e-39 163.7 120 69.2
MSTRG.3884 Avicennia marina HOM05D007336 ORTHO05D009339 3.4e-38 161.8 121 65.3
Aa31LG2G11600 Aethionema arabicum HOM05D007336 ORTHO05D009339 4.5e-38 161.4 115 66.1
HPP92_013733 Vanilla planifolia HOM05D007336 ORTHO05D009339 5.9e-38 161.0 118 64.4
SalBow2G0618 Salvia bowleyana HOM05D007336 ORTHO05D009339 1.3e-37 159.8 122 64.8
Lsat_1_v5_gn_6_76001 Lactuca sativa HOM05D007336 ORTHO05D009339 6.5e-37 157.5 121 66.9
AUR62018066 Chenopodium quinoa HOM05D007336 ORTHO05D009339 1.1e-36 156.8 118 64.4
A01p27330 Brassica napus HOM05D007336 ORTHO05D009339 1.4e-36 156.4 115 65.2
C01p35170 Brassica napus HOM05D007336 ORTHO05D009339 1.4e-36 156.4 115 65.2
BolC1t03475H Brassica oleracea HOM05D007336 ORTHO05D009339 1.4e-36 156.4 115 65.2
BraA01t02872Z Brassica rapa HOM05D007336 ORTHO05D009339 1.4e-36 156.4 115 65.2
Thhalv10023757m.g Eutrema salsugineum HOM05D007336 ORTHO05D009339 1.4e-36 156.4 115 65.2
AUR62015269 Chenopodium quinoa HOM05D007336 ORTHO05D009339 1.9e-36 156.0 118 64.4
Peaxi162Scf00065g01021 Petunia axillaris HOM05D007336 ORTHO05D009339 1.9e-36 156.0 119 66.4
BcaB04g20156 Brassica carinata HOM05D007336 ORTHO05D009339 3.2e-36 155.2 115 65.2
SEGI_32823 Sequoiadendron giganteum HOM05D007336 ORTHO05D009339 1.2e-35 153.3 122 59.8
PGSC0003DMG400006241 Solanum tuberosum HOM05D007336 ORTHO05D009339 2.7e-35 152.1 114 64.9
CAN.G14.12 Capsicum annuum HOM05D007336 ORTHO05D009339 3.6e-35 151.8 114 64.0
Hund20531 Selenicereus undatus HOM05D007336 ORTHO05D009339 4.7e-35 151.4 118 63.6
AL1G65880 Arabidopsis lyrata HOM05D007336 ORTHO05D009339 6.1e-35 151.0 115 62.6
Nitab4.5_0000306g0320 Nicotiana tabacum HOM05D007336 ORTHO05D009339 7.9e-35 150.6 119 63.0
SGA_v2.0_scaffold104G30104 Striga asiatica HOM05D007336 ORTHO05D009339 1.8e-34 149.4 122 59.8
Sed0016582 Sechium edule HOM05D007336 ORTHO05D009339 2.3e-34 149.1 87 82.8
EL10Ac3g06656 Beta vulgaris HOM05D007336 ORTHO05D009339 3.9e-34 148.3 118 61.0
CARHR289820 Cardamine hirsuta HOM05D007336 ORTHO05D009339 3.9e-34 148.3 115 62.6
DCAR_030493 Daucus carota HOM05D007336 ORTHO05D009339 5.1e-34 147.9 120 60.0
Prupe.2G221300 Prunus persica HOM05D007336 ORTHO05D009339 6.7e-34 147.5 89 78.7
AT1G56260 Arabidopsis thaliana HOM05D007336 ORTHO05D009339 8.8e-34 147.1 116 62.9
BcaC09g49567 Brassica carinata HOM05D007336 ORTHO05D009339 2.0e-33 146.0 115 62.6
Sc19g0005520 Simmondsia chinensis HOM05D007336 ORTHO05D009339 2.0e-33 146.0 118 63.6
Sp2g06650 Schrenkiella parvula HOM05D007336 ORTHO05D009339 3.3e-33 145.2 115 60.0
Nitab4.5_0002755g0010 Nicotiana tabacum HOM05D007336 ORTHO05D009339 4.4e-33 144.8 136 57.4
Solyc01g065710.3 Solanum lycopersicum HOM05D007336 ORTHO05D009339 5.7e-33 144.4 114 63.2
Sopen01g027110 Solanum pennellii HOM05D007336 ORTHO05D009339 5.7e-33 144.4 114 63.2
ATR0693G059 Amborella trichopoda HOM05D007336 ORTHO05D009339 9.7e-33 143.7 88 76.1
Gohir.A11G270600 Gossypium hirsutum HOM05D007336 ORTHO05D009339 2.2e-32 142.5 107 69.2
Carub.0002s0790 Capsella rubella HOM05D007336 ORTHO05D009339 8.2e-32 140.6 116 58.6
PSO832G0037 Papaver somniferum HOM05D007336 ORTHO05D009339 1.4e-31 139.8 116 57.8
Cpa.g.sc48.123 Carica papaya HOM05D007336 ORTHO05D009339 2.4e-31 139.0 200 44.0
Zm00001eb300400 Zea mays HOM05D007336 ORTHO05D009339 2.4e-31 139.0 122 56.6
VMungo1383G0834 Vigna mungo HOM05D007336 ORTHO05D009339 1.2e-30 136.7 87 72.4
Nn4g25729 Nelumbo nucifera HOM05D007336 ORTHO05D009339 3.5e-30 135.2 86 76.7
Eucgr.H03263 Eucalyptus grandis HOM05D007336 ORTHO05D009339 5.0e-29 131.3 84 72.6
unitig_46.g18696 Utricularia gibba HOM05D007336 ORTHO05D009339 6.5e-29 131.0 110 58.2
Eucgr.H03265 Eucalyptus grandis HOM05D007336 ORTHO05D009339 2.5e-28 129.0 84 71.4
Eucgr.L02901 Eucalyptus grandis HOM05D007336 ORTHO05D009339 2.5e-28 129.0 84 71.4
Prupe.3G209800 Prunus persica HOM05D007336 ORTHO05D009339 2.7e-27 125.6 102 65.7
HanXRQChr13g0413951 Helianthus annuus HOM05D007336 ORTHO05D009339 6.7e-26 120.9 87 66.7
Ah.04g153680 Amaranthus hybridus HOM05D007336 ORTHO05D009339 4.4e-25 118.2 94 61.7
Glyma.03G233600 Glycine max HOM05D007336 ORTHO05D009339 1.7e-24 116.3 82 69.5
AagrBONN_evm.TU.Sc2ySwM_344.3688 Anthoceros agrestis HOM05D007336 ORTHO05D009339 8.2e-24 114.0 114 49.1
Pp3c22_13440 Physcomitrium patens HOM05D007336 ORTHO05D009339 7.7e-22 107.5 119 42.9
Oeu031988.1 Olea europaea HOM05D007336 ORTHO05D009339 1.1e-20 103.6 86 62.8
SMO137G0008 Selaginella moellendorffii HOM05D007336 ORTHO05D009339 2.3e-18 95.9 111 47.7
Mapoly0064s0018 Marchantia polymorpha HOM05D007336 ORTHO05D009339 2.3e-10 69.3 75 42.7


User provided reference genes

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