Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.08G138000 Carya illinoinensis HOM05D006805 ORTHO05D008656 2.5e-239 831.6 407 100.0
QL06p035053 Quercus lobata HOM05D006805 ORTHO05D008656 6.5e-195 684.1 398 81.7
Cfa006913 Carpinus fangiana HOM05D006805 ORTHO05D008656 1.2e-193 679.9 397 82.4
Haze_03843 Corylus avellana HOM05D006805 ORTHO05D008656 1.4e-184 649.8 456 73.0
RcHm_v2.0_Chr2g0100411 Rosa chinensis HOM05D006805 ORTHO05D008656 4.4e-183 644.8 397 76.3
TWI73G0963 Tripterygium wilfordii HOM05D006805 ORTHO05D008656 5.8e-183 644.4 406 73.9
Prupe.7G161800 Prunus persica HOM05D006805 ORTHO05D008656 6.4e-182 641.0 396 75.8
Potri.007G019400 Populus trichocarpa HOM05D006805 ORTHO05D008656 3.2e-181 638.6 399 74.7
Atru.chr3.728 Acer truncatum HOM05D006805 ORTHO05D008656 1.2e-180 636.7 405 75.1
CSS0042312 Camellia sinensis var. sinensis HOM05D006805 ORTHO05D008656 1.2e-180 636.7 402 74.9
FvH4_1g12510 Fragaria vesca HOM05D006805 ORTHO05D008656 6.6e-179 630.9 401 74.1
Thecc.01G027300 Theobroma cacao HOM05D006805 ORTHO05D008656 6.8e-176 620.9 390 74.4
CANSAT01G1867 Cannabis sativa HOM05D006805 ORTHO05D008656 2.9e-174 615.5 410 72.2
GSVIVG01018866001 Vitis vinifera HOM05D006805 ORTHO05D008656 1.1e-173 613.6 391 74.2
FAN19G2522 Fragaria x ananassa HOM05D006805 ORTHO05D008656 1.9e-173 612.8 414 71.0
TAR381G0553 Trochodendron aralioides HOM05D006805 ORTHO05D008656 2.7e-172 609.0 402 71.6
Manes.01G140000 Manihot esculenta HOM05D006805 ORTHO05D008656 7.8e-172 607.4 404 70.8
MD15G1252400 Malus domestica HOM05D006805 ORTHO05D008656 1.3e-171 606.7 394 71.8
Dinv40030 Davidia involucrata HOM05D006805 ORTHO05D008656 1.7e-171 606.3 429 69.0
Rhsim08G0122900 Rhododendron simsii HOM05D006805 ORTHO05D008656 6.6e-171 604.4 391 72.6
VMungo0251G3732 Vigna mungo HOM05D006805 ORTHO05D008656 2.5e-170 602.4 390 72.8
Nn1g05800 Nelumbo nucifera HOM05D006805 ORTHO05D008656 9.5e-170 600.5 390 71.0
Gorai.003G012500 Gossypium raimondii HOM05D006805 ORTHO05D008656 3.6e-169 598.6 400 70.0
Glyma.02G052900 Glycine max HOM05D006805 ORTHO05D008656 4.7e-169 598.2 393 72.5
PGR102G0609 Punica granatum HOM05D006805 ORTHO05D008656 4.7e-169 598.2 401 71.1
Duzib147G1209 Durio zibethinus HOM05D006805 ORTHO05D008656 8.1e-169 597.4 412 68.9
COL.COLO4_22005 Corchorus olitorius HOM05D006805 ORTHO05D008656 1.4e-168 596.7 411 68.9
CAN.G358.30 Capsicum annuum HOM05D006805 ORTHO05D008656 1.8e-168 596.3 398 71.1
Gohir.D03G012200 Gossypium hirsutum HOM05D006805 ORTHO05D008656 1.5e-167 593.2 400 69.2
Gohir.A02G167800 Gossypium hirsutum HOM05D006805 ORTHO05D008656 2.0e-167 592.8 400 69.2
THA.LOC104804245 Tarenaya hassleriana HOM05D006805 ORTHO05D008656 3.4e-167 592.0 399 70.2
Hma1.2p1_0913F.1_g235930 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 7.5e-167 590.9 391 72.4
Phvul.003G257300 Phaseolus vulgaris HOM05D006805 ORTHO05D008656 7.5e-167 590.9 390 71.3
Peaxi162Scf00418g00926 Petunia axillaris HOM05D006805 ORTHO05D008656 9.9e-167 590.5 389 71.2
Lj4g0018076 Lotus japonicus HOM05D006805 ORTHO05D008656 1.7e-166 589.7 409 68.5
Psat4g096160 Pisum sativum HOM05D006805 ORTHO05D008656 7.1e-165 584.3 393 69.7
Lalb_Chr16g0391011 Lupinus albus HOM05D006805 ORTHO05D008656 2.1e-164 582.8 388 71.6
Ciclev10025725m.g Citrus clementina HOM05D006805 ORTHO05D008656 3.5e-164 582.0 360 75.0
Sabra07G0016600 Salix brachista HOM05D006805 ORTHO05D008656 3.5e-164 582.0 437 65.7
Eucgr.J02381 Eucalyptus grandis HOM05D006805 ORTHO05D008656 1.3e-163 580.1 391 68.3
Sed0012409 Sechium edule HOM05D006805 ORTHO05D008656 3.9e-163 578.6 398 69.3
Sopen02g029480 Solanum pennellii HOM05D006805 ORTHO05D008656 2.5e-162 575.9 398 68.6
PSO731G0058 Papaver somniferum HOM05D006805 ORTHO05D008656 5.6e-162 574.7 412 67.0
Solyc02g084810.3 Solanum lycopersicum HOM05D006805 ORTHO05D008656 5.6e-162 574.7 398 68.3
CsaV3_6G046700 Cucumis sativus L. HOM05D006805 ORTHO05D008656 1.2e-161 573.5 410 67.8
Thhalv10025347m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 2.8e-161 572.4 404 66.8
Aqoxy5G01548 Aquilegia oxysepala HOM05D006805 ORTHO05D008656 1.1e-160 570.5 389 69.9
Thhalv10000178m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 3.1e-160 568.9 397 67.0
AL7G14650 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 2.0e-159 566.2 398 66.6
BcaNung00732 Brassica carinata HOM05D006805 ORTHO05D008656 3.4e-159 565.5 385 67.8
Sp7g34100 Schrenkiella parvula HOM05D006805 ORTHO05D008656 3.4e-159 565.5 397 67.0
BolC1t00250H Brassica oleracea HOM05D006805 ORTHO05D008656 4.4e-159 565.1 410 65.1
Carub.0007s0387 Capsella rubella HOM05D006805 ORTHO05D008656 4.4e-159 565.1 398 67.1
C01p02610 Brassica napus HOM05D006805 ORTHO05D008656 7.6e-159 564.3 385 67.8
arahy.Tifrunner.gnm1.ann1.FKKR7E Arachis hypogaea HOM05D006805 ORTHO05D008656 2.9e-158 562.4 367 71.1
Medtr8g076840 Medicago truncatula HOM05D006805 ORTHO05D008656 2.9e-158 562.4 392 68.4
MELO3C007867.2 Cucumis melo HOM05D006805 ORTHO05D008656 3.8e-158 562.0 437 64.1
arahy.Tifrunner.gnm1.ann1.P9L48X Arachis hypogaea HOM05D006805 ORTHO05D008656 4.9e-158 561.6 384 69.5
CARHR244770 Cardamine hirsuta HOM05D006805 ORTHO05D008656 4.9e-158 561.6 402 65.4
FAN23G0481 Fragaria x ananassa HOM05D006805 ORTHO05D008656 1.1e-157 560.5 408 67.9
Cc07_g10060 Coffea canephora HOM05D006805 ORTHO05D008656 3.2e-157 558.9 390 68.7
Duzib264G1030 Durio zibethinus HOM05D006805 ORTHO05D008656 5.4e-157 558.1 412 67.0
Hund16454 Selenicereus undatus HOM05D006805 ORTHO05D008656 1.2e-156 557.0 364 71.2
A01p02400 Brassica napus HOM05D000394 ORTHO05D008656 1.9e-154 549.7 417 62.6
MSTRG.2490 Avicennia marina HOM05D006805 ORTHO05D008656 7.3e-154 547.7 392 65.3
BraA01t00229Z Brassica rapa HOM05D006805 ORTHO05D008656 4.7e-153 545.0 402 63.9
HanXRQChr14g0441241 Helianthus annuus HOM05D006805 ORTHO05D008656 3.1e-152 542.3 399 62.9
Nitab4.5_0004708g0010 Nicotiana tabacum HOM05D006805 ORTHO05D008656 3.1e-152 542.3 395 66.1
Migut.H02510 Erythranthe guttata HOM05D006805 ORTHO05D008656 5.2e-152 541.6 410 62.4
AT4G36440 Arabidopsis thaliana HOM05D006805 ORTHO05D008656 1.5e-151 540.0 399 64.7
ECA238G0382 Erigeron canadensis HOM05D006805 ORTHO05D008656 3.9e-147 525.4 394 61.4
DCAR_025973 Daucus carota HOM05D006805 ORTHO05D008656 2.5e-146 522.7 395 63.3
AUR62007618 Chenopodium quinoa HOM05D006805 ORTHO05D008656 4.3e-146 521.9 361 67.0
SGA_v2.0_scaffold51G18803 Striga asiatica HOM05D006805 ORTHO05D008656 1.9e-141 506.5 453 55.8
vmacro17722 Vaccinium macrocarpon HOM05D006805 ORTHO05D008656 4.2e-141 505.4 350 67.7
Ca_22341_v3 Cicer arietinum L. HOM05D006805 ORTHO05D008656 6.7e-139 498.0 390 63.3
Nitab4.5_0000723g0180 Nicotiana tabacum HOM05D006805 ORTHO05D008656 3.3e-138 495.7 389 63.2
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 7.4e-138 494.6 437 57.9
BcaNung05308 Brassica carinata HOM05D000394 ORTHO05D000299 5.3e-136 488.4 350 64.3
HPP92_008328 Vanilla planifolia HOM05D006805 ORTHO05D008656 1.5e-135 486.9 385 57.9
SalBow8G5631 Salvia bowleyana HOM05D006805 ORTHO05D008656 2.1e-129 466.5 421 55.6
ATR1154G040 Amborella trichopoda HOM05D006805 ORTHO05D008656 1.8e-128 463.4 350 62.9
FAN26G3258 Fragaria x ananassa HOM05D006805 ORTHO05D008656 3.4e-127 459.1 408 60.0
Hma1.2p1_2955F.1_g330740 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 1.1e-125 454.1 341 66.0
CDE06G0805 Ceratophyllum demersum HOM05D006805 ORTHO05D008656 2.5e-125 453.0 345 62.0
Hma1.2p1_0913F.1_g235940 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 2.7e-124 449.5 287 75.6
MBI16_g23836_MAGBIO Magnolia biondii HOM05D006805 ORTHO05D008656 7.7e-119 431.4 375 58.1
Aa31LG6G13250 Aethionema arabicum HOM05D006805 ORTHO05D008656 5.0e-118 428.7 309 64.7
unitig_61.g26353 Utricularia gibba HOM05D006805 ORTHO05D008656 4.5e-111 405.6 389 52.2
Lj4C209T2 Lonicera japonica HOM05D006805 ORTHO05D008656 2.8e-97 359.8 254 68.5
arahy.Tifrunner.gnm1.ann1.CY3TH7 Arachis hypogaea HOM05D006805 ORTHO05D008656 2.5e-93 346.7 429 48.7
EL10As8g23891 Beta vulgaris HOM05D006805 ORTHO05D008656 4.2e-93 345.9 213 70.0
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 1.2e-92 344.4 250 65.6
AUR62004104 Chenopodium quinoa HOM05D006805 ORTHO05D008656 1.6e-92 344.0 250 66.0
AagrBONN_evm.TU.Sc2ySwM_228.1023 Anthoceros agrestis HOM05D006805 ORTHO05D001783 5.7e-90 335.5 389 45.0
SMO141G0060 Selaginella moellendorffii HOM05D006805 ORTHO05D008656 4.2e-85 319.3 336 46.1
Mapoly0033s0048 Marchantia polymorpha HOM05D006805 ORTHO05D008656 5.5e-85 318.9 406 41.1
Cpa.g.sc6.179 Carica papaya HOM05D006805 ORTHO05D008656 5.7e-82 308.9 390 45.9
Sc03g0003190 Simmondsia chinensis HOM05D006805 ORTHO05D008656 2.7e-79 300.1 394 43.4
Pp3c9_15730 Physcomitrium patens HOM05D006805 ORTHO05D008656 5.9e-79 298.9 402 42.0
Pp3c15_5920 Physcomitrium patens HOM05D006805 ORTHO05D008656 2.8e-76 290.0 384 40.9
SGA_v2.0_scaffold7G03543 Striga asiatica HOM05D006805 ORTHO05D003527 1.6e-71 274.2 207 64.3
TPR.G21535 Trifolium pratense HOM05D006805 ORTHO05D008656 4.7e-68 262.7 170 70.6
Lsat_1_v5_gn_2_78040 Lactuca sativa HOM05D006805 ORTHO05D008656 5.4e-64 249.2 221 57.9
HanXRQChr12g0370271 Helianthus annuus HOM05D006805 ORTHO05D008656 3.6e-60 236.5 212 54.7
AL6G38800 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 4.7e-60 236.1 187 58.8
Zm00001eb128340 Zea mays HOM05D006805 ORTHO05D008656 1.4e-59 234.6 182 59.9
Dinv10224 Davidia involucrata HOM05D006805 ORTHO05D008656 8.3e-57 225.3 137 76.6
Glyma.16G133100 Glycine max HOM05D006805 ORTHO05D008656 2.0e-50 204.1 119 77.3
HanXRQChr16g0499431 Helianthus annuus HOM05D006805 ORTHO05D008656 6.4e-49 199.1 294 38.4
TPR.G21539 Trifolium pratense HOM05D000894 ORTHO05D001833 1.1e-48 198.4 127 72.4
HanXRQChr09g0256121 Helianthus annuus HOM05D006805 ORTHO05D008656 2.1e-47 194.1 295 40.7
Lj2g0002148 Lotus japonicus HOM05D006805 ORTHO05D008656 3.5e-39 166.8 97 74.2
Glyma.10G129950 Glycine max HOM05D006805 ORTHO05D008656 7.3e-37 159.1 107 66.4
EL10Ac7g17413 Beta vulgaris HOM05D006805 ORTHO05D008656 1.1e-29 135.2 151 44.4
MD02G1139100 Malus domestica HOM05D006805 ORTHO05D008656 7.6e-26 122.5 107 57.0
Os01g0262700 Oryza sativa ssp. japonica HOM05D006805 ORTHO05D008656 7.6e-26 122.5 112 54.5
HanXRQChr12g0370281 Helianthus annuus HOM05D006805 ORTHO05D008656 1.2e-15 88.6 86 52.3
RcHm_v2.0_Chr2g0136281 Rosa chinensis HOM05D006805 ORTHO05D008656 3.8e-09 67.0 42 81.0


User provided reference genes

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