Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.08G122100 Carya illinoinensis HOM05D005123 ORTHO05D006532 1.1e-71 273.1 133 100.0
Haze_04379 Corylus avellana HOM05D005123 ORTHO05D006532 3.3e-55 218.4 125 84.8
Cfa006396 Carpinus fangiana HOM05D005123 ORTHO05D006532 5.7e-55 217.6 125 83.2
QL03p027727 Quercus lobata HOM05D005123 ORTHO05D006532 7.4e-55 217.2 125 84.0
Hma1.2p1_0817F.1_g223190 Hydrangea macrophylla HOM05D005123 ORTHO05D006532 3.1e-53 211.8 123 80.5
CSS0014237 Camellia sinensis var. sinensis HOM05D005123 ORTHO05D006532 5.3e-53 211.1 115 84.3
CSS0032730 Camellia sinensis var. sinensis HOM05D005123 ORTHO05D006532 5.3e-53 211.1 115 84.3
Actinidia18366 Actinidia chinensis HOM05D005123 ORTHO05D006532 5.9e-52 207.6 115 82.6
MBI11_g20622_MAGBIO Magnolia biondii HOM05D005123 ORTHO05D006532 5.9e-52 207.6 121 81.0
GSVIVG01036232001 Vitis vinifera HOM05D005123 ORTHO05D006532 5.9e-52 207.6 125 78.4
EL10Ac4g09082 Beta vulgaris HOM05D005123 ORTHO05D006532 1.0e-51 206.8 125 77.6
COL.COLO4_15380 Corchorus olitorius HOM05D005123 ORTHO05D006532 1.7e-51 206.1 123 78.0
Prupe.6G345400 Prunus persica HOM05D005123 ORTHO05D006532 1.7e-51 206.1 113 84.1
Glyma.19G245900 Glycine max HOM05D005123 ORTHO05D006532 2.2e-51 205.7 125 77.6
Psat0s169g0040 Pisum sativum HOM05D005123 ORTHO05D006532 2.9e-51 205.3 125 77.6
Duzib177G0775 Durio zibethinus HOM05D005123 ORTHO05D006532 3.8e-51 204.9 112 83.9
Nn1g02615 Nelumbo nucifera HOM05D005123 ORTHO05D006532 3.8e-51 204.9 115 80.9
Hund06950 Selenicereus undatus HOM05D005123 ORTHO05D006532 3.8e-51 204.9 113 81.4
CsaV3_2G003960 Cucumis sativus L. HOM05D005123 ORTHO05D006532 5.0e-51 204.5 115 80.9
TPR.G6919 Trifolium pratense HOM05D005123 ORTHO05D006532 8.5e-51 203.8 125 76.8
TAR365G0219 Trochodendron aralioides HOM05D005123 ORTHO05D006532 8.5e-51 203.8 114 81.6
VMungo0540G0367 Vigna mungo HOM05D005123 ORTHO05D006532 1.1e-50 203.4 125 76.8
Dinv17936 Davidia involucrata HOM05D005123 ORTHO05D006532 1.4e-50 203.0 109 85.3
PGR004G1863 Punica granatum HOM05D005123 ORTHO05D006532 1.4e-50 203.0 115 80.0
Atru.BG.126.p Acer truncatum HOM05D005123 ORTHO05D006532 1.9e-50 202.6 112 80.4
Ah.04g162190 Amaranthus hybridus HOM05D005123 ORTHO05D006532 1.9e-50 202.6 111 83.8
Phvul.006G102800 Phaseolus vulgaris HOM05D005123 ORTHO05D006532 2.5e-50 202.2 125 76.8
CANSAT54G2420 Cannabis sativa HOM05D005123 ORTHO05D006532 3.2e-50 201.8 119 80.7
unitig_0.g2303 Utricularia gibba HOM05D005123 ORTHO05D006532 3.2e-50 201.8 122 75.4
arahy.Tifrunner.gnm1.ann1.01P7ER Arachis hypogaea HOM05D005123 ORTHO05D006532 5.5e-50 201.1 125 77.6
Gohir.A08G216000 Gossypium hirsutum HOM05D005123 ORTHO05D006532 5.5e-50 201.1 127 76.4
Gorai.004G247100 Gossypium raimondii HOM05D005123 ORTHO05D006532 5.5e-50 201.1 127 76.4
Manes.08G136400 Manihot esculenta HOM05D005123 ORTHO05D006532 5.5e-50 201.1 117 79.5
Potri.005G055800 Populus trichocarpa HOM05D005123 ORTHO05D006532 9.4e-50 200.3 112 83.9
Aqoxy5G00319 Aquilegia oxysepala HOM05D005123 ORTHO05D006532 1.6e-49 199.5 111 82.0
DCAR_006646 Daucus carota HOM05D005123 ORTHO05D006532 1.6e-49 199.5 123 77.2
Gohir.D08G232600 Gossypium hirsutum HOM05D005123 ORTHO05D006532 1.6e-49 199.5 127 75.6
SGA_v2.0_scaffold80G25897 Striga asiatica HOM05D005123 ORTHO05D006532 1.6e-49 199.5 114 81.6
Eucgr.H04317 Eucalyptus grandis HOM05D005123 ORTHO05D006532 2.7e-49 198.7 116 78.4
Cpa.g.sc736.2 Carica papaya HOM05D005123 ORTHO05D006532 3.6e-49 198.4 125 75.2
AUR62001056 Chenopodium quinoa HOM05D005123 ORTHO05D006532 3.6e-49 198.4 111 82.0
MD04G1226700 Malus domestica HOM05D005123 ORTHO05D006532 3.6e-49 198.4 119 76.5
RcHm_v2.0_Chr4g0421451 Rosa chinensis HOM05D005123 ORTHO05D006532 3.6e-49 198.4 122 75.4
vmacro13816 Vaccinium macrocarpon HOM05D005123 ORTHO05D006532 3.6e-49 198.4 132 72.7
Medtr7g115310 Medicago truncatula HOM05D005123 ORTHO05D006532 4.7e-49 198.0 115 79.1
PSO170G0405 Papaver somniferum HOM05D005123 ORTHO05D006532 4.7e-49 198.0 120 76.7
Thecc.05G280500 Theobroma cacao HOM05D005123 ORTHO05D006532 4.7e-49 198.0 120 76.7
arahy.Tifrunner.gnm1.ann1.9VED02 Arachis hypogaea HOM05D005123 ORTHO05D006532 7.9e-49 197.2 125 76.8
Os12g0597400 Oryza sativa ssp. japonica HOM05D005123 ORTHO05D006532 1.0e-48 196.8 122 74.6
Nitab4.5_0002247g0060 Nicotiana tabacum HOM05D005123 ORTHO05D006532 1.8e-48 196.1 122 73.8
PGSC0003DMG400027514 Solanum tuberosum HOM05D005123 ORTHO05D006532 1.8e-48 196.1 122 74.6
Gohir.D08G233000 Gossypium hirsutum HOM05D005123 ORTHO05D006532 2.3e-48 195.7 127 74.8
HanXRQChr09g0259781 Helianthus annuus HOM05D005123 ORTHO05D006532 2.3e-48 195.7 114 77.2
Lsat_1_v5_gn_0_36021 Lactuca sativa HOM05D005123 ORTHO05D006532 2.3e-48 195.7 122 76.2
ATR0665G099 Amborella trichopoda HOM05D005123 ORTHO05D006532 3.0e-48 195.3 114 78.1
AUR62004896 Chenopodium quinoa HOM05D005123 ORTHO05D006532 3.0e-48 195.3 111 81.1
Migut.N01919 Erythranthe guttata HOM05D005123 ORTHO05D006532 5.1e-48 194.5 125 74.4
Gorai.004G247500 Gossypium raimondii HOM05D005123 ORTHO05D006532 5.1e-48 194.5 127 74.0
Sabra05G0048700 Salix brachista HOM05D005123 ORTHO05D006532 5.1e-48 194.5 112 81.2
ECA232G3987 Erigeron canadensis HOM05D005123 ORTHO05D006532 6.7e-48 194.1 112 77.7
Ca_09430_v3 Cicer arietinum L. HOM05D005123 ORTHO05D006532 8.8e-48 193.7 115 78.3
Peaxi162Scf00282g00718 Petunia axillaris HOM05D005123 ORTHO05D006532 8.8e-48 193.7 112 77.7
Solyc01g097160.3 Solanum lycopersicum HOM05D005123 ORTHO05D006532 8.8e-48 193.7 122 73.0
Sopen01g040830 Solanum pennellii HOM05D005123 ORTHO05D006532 8.8e-48 193.7 122 73.0
FvH4_4g17540 Fragaria vesca HOM05D005123 ORTHO05D006532 1.1e-47 193.4 122 74.6
FAN12G0908 Fragaria x ananassa HOM05D005123 ORTHO05D006532 1.5e-47 193.0 123 72.4
Lalb_Chr18g0043951 Lupinus albus HOM05D005123 ORTHO05D006532 1.5e-47 193.0 122 74.6
Oeu038460.1 Olea europaea HOM05D005123 ORTHO05D006532 2.0e-47 192.6 137 69.3
SalBow4G1942 Salvia bowleyana HOM05D005123 ORTHO05D006532 2.0e-47 192.6 137 69.3
FAN12G0393 Fragaria x ananassa HOM05D005123 ORTHO05D006532 2.6e-47 192.2 123 72.4
Lj1g0023983 Lotus japonicus HOM05D005123 ORTHO05D006532 2.6e-47 192.2 116 79.3
FAN07G0296 Fragaria x ananassa HOM05D005123 ORTHO05D006532 4.4e-47 191.4 109 79.8
Sed0022916 Sechium edule HOM05D005123 ORTHO05D006532 4.4e-47 191.4 116 76.7
Lj9C664G10 Lonicera japonica HOM05D005123 ORTHO05D006532 1.3e-46 189.9 124 72.6
PSO063G6470 Papaver somniferum HOM05D005123 ORTHO05D006532 1.3e-46 189.9 115 74.8
Rhsim07G0074600 Rhododendron simsii HOM05D005123 ORTHO05D006532 1.3e-46 189.9 115 77.4
Sc06g0003780 Simmondsia chinensis HOM05D005123 ORTHO05D006532 1.3e-46 189.9 111 76.6
MSTRG.5089 Avicennia marina HOM05D005123 ORTHO05D006532 1.7e-46 189.5 115 76.5
Aa31LG5G15060 Aethionema arabicum HOM05D005123 ORTHO05D006532 2.8e-46 188.7 116 74.1
CAN.G134.75 Capsicum annuum HOM05D005123 ORTHO05D006532 6.3e-46 187.6 112 76.8
AL3G14690 Arabidopsis lyrata HOM05D005123 ORTHO05D006532 8.2e-46 187.2 125 69.6
TWI12G0989 Tripterygium wilfordii HOM05D005123 ORTHO05D006532 8.2e-46 187.2 105 81.9
THA.LOC104802845 Tarenaya hassleriana HOM05D005123 ORTHO05D006532 1.1e-45 186.8 125 72.0
AT3G04650 Arabidopsis thaliana HOM05D005123 ORTHO05D006532 1.4e-45 186.4 125 69.6
Zm00001eb030960 Zea mays HOM05D005123 ORTHO05D006532 1.8e-45 186.0 122 70.5
Carub.0003s0381 Capsella rubella HOM05D005123 ORTHO05D006532 2.4e-45 185.7 125 70.4
HPP92_026486 Vanilla planifolia HOM05D005123 ORTHO05D006532 5.3e-45 184.5 122 68.9
BcaB04g19310 Brassica carinata HOM05D005123 ORTHO05D006532 7.0e-45 184.1 125 71.2
Cc02_g30900 Coffea canephora HOM05D005123 ORTHO05D006532 7.0e-45 184.1 136 65.4
BcaC01g04358 Brassica carinata HOM05D005123 ORTHO05D006532 9.1e-45 183.7 125 70.4
C03p41060 Brassica napus HOM05D005123 ORTHO05D006532 9.1e-45 183.7 125 70.4
BolC3t16395H Brassica oleracea HOM05D005123 ORTHO05D006532 9.1e-45 183.7 125 70.4
Sp3g03490 Schrenkiella parvula HOM05D005123 ORTHO05D006532 1.5e-44 183.0 125 70.4
A03p33760 Brassica napus HOM05D005123 ORTHO05D006532 2.6e-44 182.2 125 69.6
BraA03t12549Z Brassica rapa HOM05D005123 ORTHO05D006532 2.6e-44 182.2 125 69.6
CARHR078850 Cardamine hirsuta HOM05D005123 ORTHO05D006532 4.5e-44 181.4 125 68.0
HPP92_014225 Vanilla planifolia HOM05D005123 ORTHO05D006532 5.9e-44 181.0 122 68.0
Thhalv10020605m.g Eutrema salsugineum HOM05D005123 ORTHO05D006532 1.3e-43 179.9 125 68.0
Glyma.03G247900 Glycine max HOM05D005123 ORTHO05D006532 6.5e-43 177.6 105 77.1
Nitab4.5_0010168g0020 Nicotiana tabacum HOM05D005123 ORTHO05D006532 1.1e-42 176.8 145 60.0
Mapoly0079s0067 Marchantia polymorpha HOM05D005123 ORTHO05D006532 2.1e-41 172.6 116 69.0
AagrBONN_evm.TU.Sc2ySwM_228.1429 Anthoceros agrestis HOM05D005123 ORTHO05D006532 3.0e-40 168.7 116 63.8
Pp3c3_15330 Physcomitrium patens HOM05D005123 ORTHO05D006532 2.6e-39 165.6 119 63.0
Ciclev10029649m.g Citrus clementina HOM05D005123 ORTHO05D006532 1.0e-35 153.7 96 76.0
SMO367G1262 Selaginella moellendorffii HOM05D005123 ORTHO05D006532 2.2e-35 152.5 116 60.3
AUR62044106 Chenopodium quinoa HOM05D005123 ORTHO05D006532 1.1e-34 150.2 84 79.8
Ciclev10029972m.g Citrus clementina HOM05D005123 ORTHO05D006532 7.7e-28 127.5 84 72.6
SEGI_30682 Sequoiadendron giganteum HOM05D005123 ORTHO05D006532 1.7e-27 126.3 75 74.7
Ciclev10029835m.g Citrus clementina HOM05D005123 ORTHO05D006532 1.6e-25 119.8 89 66.3
Nitab4.5_0004275g0030 Nicotiana tabacum HOM05D006218 ORTHO05D007338 5.2e-24 114.8 81 64.2
MELO3C004395.2 Cucumis melo HOM05D005123 ORTHO05D006532 1.7e-22 109.8 113 54.0
Cre03.g207150 Chlamydomonas reinhardtii HOM05D005123 ORTHO05D006532 2.8e-22 109.0 106 50.0
CBR_g26324 Chara braunii HOM05D005123 ORTHO05D006532 8.3e-22 107.5 140 40.7
ClCG02G016790 Citrullus lanatus HOM05D005123 ORTHO05D006532 9.1e-21 104.0 73 71.2
Nitab4.5_0003027g0090 Nicotiana tabacum HOM05D005123 ORTHO05D006532 5.5e-18 94.7 81 59.3
MCO15G267 Micromonas commoda HOM05D005123 ORTHO05D006532 6.6e-11 71.2 115 40.0
Gohir.A07G068900 Gossypium hirsutum HOM05D005123 ORTHO05D006532 7.3e-10 67.8 59 57.6
Ciclev10029659m.g Citrus clementina HOM05D005123 ORTHO05D006532 1.7e-06 56.6 60 46.7


User provided reference genes

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