Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.08G104600 Carya illinoinensis HOM05D006839 ORTHO05D007872 7.1e-77 290.4 138 100.0
Haze_04725 Corylus avellana HOM05D006839 ORTHO05D007872 1.7e-49 199.5 133 66.2
Potri.005G208400 Populus trichocarpa HOM05D006839 ORTHO05D007872 1.7e-46 189.5 133 63.2
Manes.05G075300 Manihot esculenta HOM05D006839 ORTHO05D007872 3.2e-45 185.3 137 63.5
CSS0014698 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 6.1e-44 181.0 126 65.9
Duzib211G0653 Durio zibethinus HOM05D006839 ORTHO05D007872 6.1e-44 181.0 133 63.9
CSS0016717 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 1.0e-43 180.3 126 65.9
TWI14G1288 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 1.4e-43 179.9 133 62.4
QL12p022082 Quercus lobata HOM05D006839 ORTHO05D007872 4.0e-43 178.3 125 65.6
Cfa006129 Carpinus fangiana HOM05D006839 ORTHO05D007872 8.8e-43 177.2 127 64.6
TWI59G1109 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 8.8e-43 177.2 135 60.0
Glyma.10G025800 Glycine max HOM05D006839 ORTHO05D007872 5.7e-42 174.5 134 56.7
VMungo0720G2173 Vigna mungo HOM05D006839 ORTHO05D007872 5.7e-42 174.5 130 60.0
Glyma.02G148000 Glycine max HOM05D006839 ORTHO05D007872 7.5e-42 174.1 133 57.9
VMungo1383G1584 Vigna mungo HOM05D006839 ORTHO05D007872 7.5e-42 174.1 134 59.0
Glyma.19G155100 Glycine max HOM05D006839 ORTHO05D007872 2.8e-41 172.2 131 60.3
Phvul.001G150100 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 4.8e-41 171.4 134 57.5
Phvul.007G171000 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 1.1e-40 170.2 133 57.9
Gohir.A11G122100 Gossypium hirsutum HOM05D006839 ORTHO05D007872 1.4e-40 169.9 133 58.6
Gohir.D11G127300 Gossypium hirsutum HOM05D006839 ORTHO05D007872 1.4e-40 169.9 133 59.4
Gohir.D11G127350 Gossypium hirsutum HOM05D006839 ORTHO05D007872 1.4e-40 169.9 133 59.4
Sabra05G0158500 Salix brachista HOM05D006839 ORTHO05D007872 3.1e-40 168.7 125 60.0
Atru.chr5.1418 Acer truncatum HOM05D006839 ORTHO05D007872 4.1e-40 168.3 133 59.4
Cpa.g.sc52.24 Carica papaya HOM05D006839 ORTHO05D007872 7.0e-40 167.5 128 59.4
COL.COLO4_09110 Corchorus olitorius HOM05D006839 ORTHO05D007872 1.2e-39 166.8 111 65.8
Gorai.007G136000 Gossypium raimondii HOM05D006839 ORTHO05D007872 1.2e-39 166.8 133 57.9
Hma1.2p1_0257F.1_g103610 Hydrangea macrophylla HOM05D000265 ORTHO05D007872 1.6e-39 166.4 110 67.3
CsaV3_6G037040 Cucumis sativus L. HOM05D006839 ORTHO05D007872 2.0e-39 166.0 126 61.1
MELO3C014411.2 Cucumis melo HOM05D006839 ORTHO05D007872 5.9e-39 164.5 126 59.5
Ciclev10023291m.g Citrus clementina HOM05D006839 ORTHO05D007872 7.7e-39 164.1 111 64.9
vmacro14927 Vaccinium macrocarpon HOM05D000265 ORTHO05D000161 1.3e-38 163.3 124 60.5
FvH4_2g23730 Fragaria vesca HOM05D006839 ORTHO05D007872 2.2e-38 162.5 128 56.2
Thecc.01G280800 Theobroma cacao HOM05D006839 ORTHO05D007872 3.8e-38 161.8 127 59.8
Prupe.8G242500 Prunus persica HOM05D006839 ORTHO05D007872 6.5e-38 161.0 124 58.1
RcHm_v2.0_Chr6g0291211 Rosa chinensis HOM05D006839 ORTHO05D007872 8.5e-38 160.6 110 63.6
FAN24G3533 Fragaria x ananassa HOM05D006839 ORTHO05D007872 1.5e-37 159.8 128 55.5
PGR119G0017 Punica granatum HOM05D006839 ORTHO05D007872 3.2e-37 158.7 128 57.8
Sed0018644 Sechium edule HOM05D006839 ORTHO05D007872 7.2e-37 157.5 126 56.3
Medtr7g094760 Medicago truncatula HOM05D006839 ORTHO05D007872 9.4e-37 157.1 127 57.5
TAR636G2925 Trochodendron aralioides HOM05D006839 ORTHO05D007872 9.4e-37 157.1 111 63.1
Lj1g0018770 Lotus japonicus HOM05D006839 ORTHO05D007872 1.2e-36 156.8 136 54.4
MD11G1287200 Malus domestica HOM05D006839 ORTHO05D007872 6.1e-36 154.5 126 56.3
Oeu022880.1 Olea europaea HOM05D006839 ORTHO05D007872 1.4e-35 153.3 135 54.1
ECA248G0593 Erigeron canadensis HOM05D006839 ORTHO05D007872 2.3e-35 152.5 124 56.5
MBI19_g46647_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 3.0e-35 152.1 108 63.0
SalBow4G2140 Salvia bowleyana HOM05D006839 ORTHO05D007872 4.0e-35 151.8 109 62.4
Eucgr.K03376 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.2e-34 150.2 109 62.4
MBI19_g14316_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 1.2e-34 150.2 108 62.0
Aqoxy2G03292 Aquilegia oxysepala HOM05D006839 ORTHO05D007872 2.0e-34 149.4 124 50.0
Cc01_g19590 Coffea canephora HOM05D006839 ORTHO05D007872 4.4e-34 148.3 109 61.5
Lsat_1_v5_gn_5_190060 Lactuca sativa HOM05D006839 ORTHO05D007872 4.4e-34 148.3 124 54.8
Actinidia24884 Actinidia chinensis HOM05D006839 ORTHO05D007872 5.7e-34 147.9 118 60.2
Migut.D00285 Erythranthe guttata HOM05D006839 ORTHO05D007872 1.1e-32 143.7 126 53.2
Glyma.03G152600 Glycine max HOM05D006839 ORTHO05D007872 2.4e-32 142.5 135 52.6
FAN15G1162 Fragaria x ananassa HOM05D006839 ORTHO05D007872 9.1e-32 140.6 119 53.8
FAN27G2541 Fragaria x ananassa HOM05D006839 ORTHO05D007872 1.6e-31 139.8 100 62.0
FAN20G2906 Fragaria x ananassa HOM05D006839 ORTHO05D007872 1.3e-30 136.7 119 52.9
ATR0626G183 Amborella trichopoda HOM05D006839 ORTHO05D007872 2.3e-30 136.0 115 53.0
Nn1g02187 Nelumbo nucifera HOM05D006839 ORTHO05D007872 2.9e-30 135.6 108 55.6
Nitab4.5_0001028g0040 Nicotiana tabacum HOM05D006839 ORTHO05D007872 2.9e-30 135.6 131 52.7
PGSC0003DMG400039700 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.1e-29 133.7 133 52.6
PGSC0003DMG402026866 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.1e-29 133.7 133 52.6
Solyc09g065040.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 4.2e-29 131.7 133 51.1
Nitab4.5_0007089g0020 Nicotiana tabacum HOM05D006839 ORTHO05D007872 5.5e-29 131.3 133 51.1
Sopen09g026780 Solanum pennellii HOM05D006839 ORTHO05D007872 7.2e-29 131.0 133 51.1
Zm00001eb305770 Zea mays HOM05D006839 ORTHO05D007872 6.8e-27 124.4 137 43.1
SEGI_06174 Sequoiadendron giganteum HOM05D006839 ORTHO05D007872 8.9e-27 124.0 135 45.2
SalBow7G1292 Salvia bowleyana HOM05D006839 ORTHO05D007872 6.3e-25 117.9 133 45.1
Rhsim01G0275200 Rhododendron simsii HOM05D006839 ORTHO05D007872 8.3e-25 117.5 86 59.3
Migut.N02162 Erythranthe guttata HOM05D006839 ORTHO05D007872 7.0e-24 114.4 123 43.1
CAN.G619.39 Capsicum annuum HOM05D006839 ORTHO05D007872 2.0e-23 112.8 127 42.5
CAN.G619.35 Capsicum annuum HOM05D006839 ORTHO05D007872 6.6e-22 107.8 104 48.1
SalBow6G6528 Salvia bowleyana HOM05D006839 ORTHO05D007872 6.6e-22 107.8 115 46.1
PGSC0003DMG400045936 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.5e-21 106.7 111 45.9
Solyc04g026140.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 1.9e-21 106.3 127 42.5
Eucgr.L02237 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.5e-21 105.9 124 39.5
Eucgr.H00898 Eucalyptus grandis HOM05D006839 ORTHO05D007872 3.3e-21 105.5 124 39.5
PGSC0003DMG400041475 Solanum tuberosum HOM05D006839 ORTHO05D007872 5.6e-21 104.8 108 47.2
CAN.G619.36 Capsicum annuum HOM05D006839 ORTHO05D007872 9.5e-21 104.0 118 43.2
Peaxi162Scf00681g00001 Petunia axillaris HOM05D006839 ORTHO05D007872 4.7e-20 101.7 129 41.1
Eucgr.L02238 Eucalyptus grandis HOM05D006839 ORTHO05D007872 6.1e-20 101.3 124 37.9
HPP92_001336 Vanilla planifolia HOM05D006839 ORTHO05D007872 6.1e-20 101.3 106 44.3
Migut.N02163 Erythranthe guttata HOM05D006839 ORTHO05D007872 4.0e-19 98.6 124 37.1
SalBow6G4286 Salvia bowleyana HOM05D006839 ORTHO05D007872 6.8e-19 97.8 109 42.2
PGSC0003DMG400046937 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.2e-18 97.1 114 41.2
Eucgr.A00826 Eucalyptus grandis HOM05D006839 ORTHO05D007872 3.4e-18 95.5 132 33.3
SMO364G0778 Selaginella moellendorffii HOM05D006839 ORTHO05D007872 7.5e-18 94.4 106 42.5
Nitab4.5_0000771g0180 Nicotiana tabacum HOM05D006839 ORTHO05D007872 9.8e-18 94.0 125 40.8
SalBow6G2151 Salvia bowleyana HOM05D006839 ORTHO05D007872 4.9e-17 91.7 123 38.2
Eucgr.H01539 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.9e-16 89.7 126 37.3
Peaxi162Scf00681g00007 Petunia axillaris HOM05D006839 ORTHO05D007872 1.9e-16 89.7 121 41.3
Eucgr.J01400 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.4e-16 89.4 113 37.2
SalBow6G0334 Salvia bowleyana HOM05D006839 ORTHO05D007872 3.2e-16 89.0 123 36.6
Nitab4.5_0006691g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 4.1e-16 88.6 100 43.0
PGR083G1544 Punica granatum HOM05D006839 ORTHO05D007872 9.2e-16 87.4 109 38.5
SalBow6G5378 Salvia bowleyana HOM05D006839 ORTHO05D007872 9.2e-16 87.4 122 36.1
Nitab4.5_0006691g0070 Nicotiana tabacum HOM05D006839 ORTHO05D007872 6.0e-15 84.7 103 40.8
Nitab4.5_0009973g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 6.0e-15 84.7 103 40.8
SalBow6G6538 Salvia bowleyana HOM05D006839 ORTHO05D007872 7.8e-15 84.3 109 37.6
Nitab4.5_0000771g0190 Nicotiana tabacum HOM05D006839 ORTHO05D007872 3.9e-14 82.0 93 43.0
PGSC0003DMG400029246 Solanum tuberosum HOM05D006839 ORTHO05D007872 6.6e-14 81.3 80 52.5
Eucgr.A00847 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.5e-13 80.1 124 30.6
Peaxi162Scf00681g00002 Petunia axillaris HOM05D006839 ORTHO05D007872 9.5e-13 77.4 82 45.1
Actinidia21107 Actinidia chinensis HOM05D000265 ORTHO05D000161 2.1e-12 76.3 55 58.2
PGR031G1999 Punica granatum HOM05D006839 ORTHO05D007872 3.6e-12 75.5 118 35.6
Nitab4.5_0009973g0030 Nicotiana tabacum HOM05D006839 ORTHO05D007872 8.1e-12 74.3 82 45.1
PGR084G0009 Punica granatum HOM05D006839 ORTHO05D007872 1.4e-11 73.6 109 32.1
PGR142G2474 Punica granatum HOM05D006839 ORTHO05D007872 1.4e-11 73.6 109 32.1
Eucgr.A00843 Eucalyptus grandis HOM05D006839 ORTHO05D007872 4.0e-11 72.0 109 30.3
Eucgr.L00883 Eucalyptus grandis HOM05D006839 ORTHO05D007872 5.2e-11 71.6 89 36.0
PGR142G4476 Punica granatum HOM05D006839 ORTHO05D007872 4.9e-09 65.1 107 32.7
AagrBONN_evm.TU.Sc2ySwM_344.366 Anthoceros agrestis HOM05D006839 ORTHO05D007872 1.4e-08 63.5 106 32.1
Peaxi162Scf00681g00011 Petunia axillaris HOM05D006839 ORTHO05D007872 9.2e-08 60.8 77 42.9
Nitab4.5_0000003g0350 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.2e-07 60.5 110 31.8
PGR031G2486 Punica granatum HOM05D023640 ORTHO05D019592 1.0e-06 57.4 112 32.1
HanXRQChr12g0363321 Helianthus annuus HOM05D000655 ORTHO05D001166 8.6e-06 54.3 125 25.6


User provided reference genes

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