Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.08G103500 Carya illinoinensis HOM05D008605 ORTHO05D010568 1.6e-20 101.7 48 100.0
Gohir.A08G069550 Gossypium hirsutum HOM05D008605 ORTHO05D010568 5.1e-14 80.1 45 80.0
Gohir.D08G077866 Gossypium hirsutum HOM05D008605 ORTHO05D010568 5.1e-14 80.1 45 80.0
Gorai.004G082900 Gossypium raimondii HOM05D008605 ORTHO05D010568 5.1e-14 80.1 45 80.0
CiPaw.07G094000 Carya illinoinensis HOM05D008605 ORTHO05D010568 1.1e-13 79.0 45 80.0
Manes.05G073900 Manihot esculenta HOM05D008605 ORTHO05D010568 1.5e-13 78.6 48 75.0
TWI14G1197 Tripterygium wilfordii HOM05D008605 ORTHO05D010568 1.9e-13 78.2 45 77.8
Manes.01G209600 Manihot esculenta HOM05D008605 ORTHO05D010568 7.4e-13 76.3 45 73.3
Duzib138G1813 Durio zibethinus HOM05D008605 ORTHO05D010568 9.6e-13 75.9 41 82.9
CANSAT25G0728 Cannabis sativa HOM05D008605 ORTHO05D010568 1.6e-12 75.1 45 75.6
Gohir.A12G006000 Gossypium hirsutum HOM05D008605 ORTHO05D010568 2.8e-12 74.3 48 72.9
Gohir.D12G005500 Gossypium hirsutum HOM05D008605 ORTHO05D010568 2.8e-12 74.3 48 72.9
Phvul.007G169700 Phaseolus vulgaris HOM05D008605 ORTHO05D010568 2.8e-12 74.3 45 71.1
Glyma.10G024900 Glycine max HOM05D008605 ORTHO05D010568 4.8e-12 73.6 45 71.1
Potri.014G138900 Populus trichocarpa HOM05D008605 ORTHO05D010568 8.1e-12 72.8 45 71.1
Gohir.A11G121301 Gossypium hirsutum HOM05D008605 ORTHO05D010568 1.1e-11 72.4 41 78.0
Duzib211G0117 Durio zibethinus HOM05D008605 ORTHO05D010568 3.1e-11 70.9 38 81.6
CAN.G609.5 Capsicum annuum HOM05D008605 ORTHO05D010568 4.0e-11 70.5 45 71.1
Gohir.D11G126400 Gossypium hirsutum HOM05D008605 ORTHO05D010568 4.0e-11 70.5 38 81.6
Gorai.007G135100 Gossypium raimondii HOM05D008605 ORTHO05D010568 4.0e-11 70.5 38 81.6
Nn1g02155 Nelumbo nucifera HOM05D008605 ORTHO05D010568 5.3e-11 70.1 42 71.4
Nn1g02156 Nelumbo nucifera HOM05D008605 ORTHO05D010568 5.3e-11 70.1 42 71.4
Hma1.2p1_0035F.1_g021920 Hydrangea macrophylla HOM05D008605 ORTHO05D010568 1.2e-10 68.9 45 64.4
Hma1.2p1_0628F.1_g191950 Hydrangea macrophylla HOM05D008605 ORTHO05D010568 1.2e-10 68.9 45 64.4
Glyma.02G149000 Glycine max HOM05D008605 ORTHO05D010568 3.4e-10 67.4 45 66.7
Phvul.001G149100 Phaseolus vulgaris HOM05D008605 ORTHO05D010568 4.5e-10 67.0 40 75.0
Nn4g26184 Nelumbo nucifera HOM05D008605 ORTHO05D010568 5.8e-10 66.6 42 69.0
Prupe.8G244200 Prunus persica HOM05D008605 ORTHO05D010568 5.8e-10 66.6 37 75.7
Eucgr.H01517 Eucalyptus grandis HOM05D008605 ORTHO05D010568 2.9e-09 64.3 51 64.7
THA.LOC109116199 Tarenaya hassleriana HOM05D008605 ORTHO05D010568 8.4e-09 62.8 34 76.5
Migut.D00268 Erythranthe guttata HOM05D008605 ORTHO05D010568 1.4e-08 62.0 40 72.5
BolC6t38027H Brassica oleracea HOM05D008605 ORTHO05D010568 3.5e-07 57.4 40 67.5
A07p26220 Brassica napus HOM05D008605 ORTHO05D010568 6.0e-07 56.6 37 70.3
BraA07t30266Z Brassica rapa HOM05D000756 ORTHO05D000604 6.0e-07 56.6 37 70.3
Potri.008G202000 Populus trichocarpa HOM05D013078 ORTHO05D010568 6.0e-07 56.6 40 65.0
Manes.03G185200 Manihot esculenta HOM05D013078 ORTHO05D010568 7.9e-07 56.2 39 64.1
FAN17G1511 Fragaria x ananassa HOM05D008605 ORTHO05D010568 1.0e-06 55.8 34 61.8
AL5G45910 Arabidopsis lyrata HOM05D008605 ORTHO05D010568 1.3e-06 55.5 35 71.4
AT3G63088 Arabidopsis thaliana HOM05D008605 ORTHO05D010568 1.3e-06 55.5 39 66.7
Carub.0005s2974 Capsella rubella HOM05D008605 ORTHO05D010568 1.3e-06 55.5 35 71.4
Prupe.1G150500 Prunus persica HOM05D008605 ORTHO05D010568 1.8e-06 55.1 40 60.0
Potri.010G030100 Populus trichocarpa HOM05D013078 ORTHO05D010568 3.0e-06 54.3 35 65.7
PGSC0003DMG400033120 Solanum tuberosum HOM05D008605 ORTHO05D010568 6.7e-06 53.1 37 59.5


User provided reference genes

Program Settings