Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.08G102100 Carya illinoinensis HOM05D005701 ORTHO05D007058 3.2e-112 408.3 189 100.0
Cfa006081 Carpinus fangiana HOM05D005701 ORTHO05D007058 5.2e-94 347.8 189 83.6
QL02p002445 Quercus lobata HOM05D005701 ORTHO05D007058 1.2e-90 336.7 188 81.9
Haze_04768 Corylus avellana HOM05D005701 ORTHO05D007058 7.7e-90 334.0 211 75.4
TWI59G0853 Tripterygium wilfordii HOM05D005701 ORTHO05D007058 3.6e-87 325.1 191 79.6
Dinv11265 Davidia involucrata HOM05D005701 ORTHO05D007058 2.6e-85 318.9 189 78.3
ClCG09G006770 Citrullus lanatus HOM05D005701 ORTHO05D007058 2.2e-84 315.8 189 78.3
MELO3C015871.2 Cucumis melo HOM05D005701 ORTHO05D007058 2.2e-84 315.8 190 78.4
Potri.002G212400 Populus trichocarpa HOM05D005701 ORTHO05D007058 4.8e-84 314.7 186 77.4
Ciclev10022400m.g Citrus clementina HOM05D005701 ORTHO05D007058 1.8e-83 312.8 192 74.5
CsaV3_7G028500 Cucumis sativus L. HOM05D005701 ORTHO05D007058 2.4e-83 312.4 190 78.4
Thecc.01G285600 Theobroma cacao HOM05D005701 ORTHO05D007058 2.4e-83 312.4 182 79.1
Actinidia24310 Actinidia chinensis HOM05D005701 ORTHO05D007058 4.1e-83 311.6 184 77.2
CSS0017429 Camellia sinensis var. sinensis HOM05D005701 ORTHO05D007058 5.4e-83 311.2 184 76.6
vmacro02538 Vaccinium macrocarpon HOM05D005701 ORTHO05D007058 5.4e-83 311.2 182 77.5
Sed0003723 Sechium edule HOM05D005701 ORTHO05D007058 7.0e-83 310.8 189 75.1
GSVIVG01011062001 Vitis vinifera HOM05D005701 ORTHO05D007058 9.1e-83 310.5 185 77.3
Prupe.8G247700 Prunus persica HOM05D005701 ORTHO05D007058 1.2e-82 310.1 192 77.6
MD11G1292100 Malus domestica HOM05D005701 ORTHO05D007058 2.7e-82 308.9 184 78.3
MD03G1271500 Malus domestica HOM05D005701 ORTHO05D007058 4.5e-82 308.1 184 76.6
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 5.9e-82 307.8 171 80.7
Gohir.A12G006700 Gossypium hirsutum HOM05D005701 ORTHO05D007058 1.0e-81 307.0 192 75.5
Eucgr.H01544 Eucalyptus grandis HOM05D005701 ORTHO05D007058 2.3e-81 305.8 176 78.4
Duzib138G1703 Durio zibethinus HOM05D005701 ORTHO05D007058 3.8e-81 305.1 183 78.1
Oeu006228.1 Olea europaea HOM05D005701 ORTHO05D007058 6.6e-81 304.3 182 76.9
PGR119G1915 Punica granatum HOM05D005701 ORTHO05D007058 6.6e-81 304.3 179 79.3
PSO170G3928 Papaver somniferum HOM05D005701 ORTHO05D007058 1.9e-80 302.8 184 75.5
Lsat_1_v5_gn_5_187740 Lactuca sativa HOM05D005701 ORTHO05D007058 3.3e-80 302.0 184 72.8
Lalb_Chr06g0163181 Lupinus albus HOM05D005701 ORTHO05D007058 7.2e-80 300.8 169 79.9
Glyma.02G150100 Glycine max HOM05D005701 ORTHO05D007058 2.8e-79 298.9 168 78.6
Lj5g0014836 Lotus japonicus HOM05D005701 ORTHO05D007058 4.7e-79 298.1 180 74.4
PSO302G0130 Papaver somniferum HOM05D005701 ORTHO05D007058 8.0e-79 297.4 184 74.5
Nn1g02106 Nelumbo nucifera HOM05D005701 ORTHO05D007058 1.0e-78 297.0 163 82.2
RcHm_v2.0_Chr6g0291961 Rosa chinensis HOM05D005701 ORTHO05D007058 1.4e-78 296.6 190 74.7
CANSAT25G0672 Cannabis sativa HOM05D005701 ORTHO05D007058 1.8e-78 296.2 187 73.3
Manes.05G072000 Manihot esculenta HOM05D005701 ORTHO05D007058 1.8e-78 296.2 189 75.1
MSTRG.17433 Avicennia marina HOM05D005701 ORTHO05D007058 5.2e-78 294.7 190 71.1
Sc24g0004070 Simmondsia chinensis HOM05D005701 ORTHO05D007058 5.2e-78 294.7 180 75.6
FAN15G1986 Fragaria x ananassa HOM05D005701 ORTHO05D007058 6.8e-78 294.3 179 75.4
FAN20G1753 Fragaria x ananassa HOM05D005701 ORTHO05D007058 8.9e-78 293.9 184 73.9
FAN27G2557 Fragaria x ananassa HOM05D005701 ORTHO05D007058 8.9e-78 293.9 184 73.9
PGSC0003DMG401020044 Solanum tuberosum HOM05D005701 ORTHO05D007058 1.2e-77 293.5 179 75.4
SalBow6G2366 Salvia bowleyana HOM05D005701 ORTHO05D007058 1.5e-77 293.1 190 70.0
Migut.N02175 Erythranthe guttata HOM05D005701 ORTHO05D007058 3.4e-77 292.0 191 69.6
TAR365G0921 Trochodendron aralioides HOM05D005701 ORTHO05D007058 5.7e-77 291.2 161 80.1
Migut.N02139 Erythranthe guttata HOM05D005701 ORTHO05D007058 2.2e-76 289.3 191 68.6
FAN24G1361 Fragaria x ananassa HOM05D005701 ORTHO05D007058 2.2e-76 289.3 185 74.1
Medtr1g089810 Medicago truncatula HOM05D005701 ORTHO05D007058 2.8e-76 288.9 184 72.3
HanXRQChr14g0430981 Helianthus annuus HOM05D005701 ORTHO05D007058 4.9e-76 288.1 169 76.3
Aqoxy2G03192 Aquilegia oxysepala HOM05D005701 ORTHO05D007058 6.3e-76 287.7 184 71.2
Phvul.007G168600 Phaseolus vulgaris HOM05D005701 ORTHO05D007058 6.3e-76 287.7 184 72.8
Psat6g169920 Pisum sativum HOM05D005701 ORTHO05D007058 6.3e-76 287.7 180 71.7
ECA248G0764 Erigeron canadensis HOM05D005701 ORTHO05D007058 2.4e-75 285.8 178 71.3
Nitab4.5_0002093g0100 Nicotiana tabacum HOM05D005701 ORTHO05D007058 2.4e-75 285.8 200 68.5
Ca_10397_v3 Cicer arietinum L. HOM05D005701 ORTHO05D007058 3.1e-75 285.4 182 71.4
Lj2A1180T63 Lonicera japonica HOM05D005701 ORTHO05D007058 3.1e-75 285.4 184 72.8
Solyc06g084390.3 Solanum lycopersicum HOM05D005701 ORTHO05D007058 3.1e-75 285.4 179 72.1
Sopen06g035780 Solanum pennellii HOM05D005701 ORTHO05D007058 3.1e-75 285.4 179 72.1
THA.LOC104826003 Tarenaya hassleriana HOM05D005701 ORTHO05D007058 3.1e-75 285.4 169 74.6
THA.LOC104801212 Tarenaya hassleriana HOM05D005701 ORTHO05D007058 5.4e-75 284.6 170 74.1
Cc01_g05150 Coffea canephora HOM05D005701 ORTHO05D007058 5.9e-74 281.2 162 78.4
Peaxi162Scf00783g00418 Petunia axillaris HOM05D005701 ORTHO05D007058 1.7e-73 279.6 161 77.0
TPR.G26671 Trifolium pratense HOM05D005701 ORTHO05D007058 1.7e-73 279.6 195 67.7
CAN.G1682.11 Capsicum annuum HOM05D005701 ORTHO05D007058 2.3e-73 279.3 187 69.5
Ah.08g212880 Amaranthus hybridus HOM05D005701 ORTHO05D007058 1.5e-72 276.6 185 70.3
Nitab4.5_0010603g0020 Nicotiana tabacum HOM05D005701 ORTHO05D007058 3.3e-72 275.4 163 75.5
Aa31LG5G2530 Aethionema arabicum HOM05D005701 ORTHO05D007058 7.3e-72 274.2 182 69.8
AT4G02980 Arabidopsis thaliana HOM05D005701 ORTHO05D007058 1.2e-71 273.5 184 71.7
SGA_v2.0_scaffold1G00437 Striga asiatica HOM05D005701 ORTHO05D007058 1.2e-71 273.5 200 63.5
A09p02300 Brassica napus HOM05D005701 ORTHO05D007058 1.6e-71 273.1 184 71.2
BraA09t35879Z Brassica rapa HOM05D005701 ORTHO05D007058 1.6e-71 273.1 184 71.2
EL10Ac7g17192 Beta vulgaris HOM05D005701 ORTHO05D007058 8.0e-71 270.8 184 65.2
Hund06566 Selenicereus undatus HOM05D005701 ORTHO05D007058 1.8e-70 269.6 189 68.3
Migut.D00251 Erythranthe guttata HOM05D005701 ORTHO05D007058 2.3e-70 269.2 189 67.7
Sp6g03020 Schrenkiella parvula HOM05D005701 ORTHO05D007058 2.3e-70 269.2 186 70.4
AL6G49950 Arabidopsis lyrata HOM05D005701 ORTHO05D007058 3.1e-70 268.9 184 70.7
Hma1.2p1_0628F.1_g191820 Hydrangea macrophylla HOM05D005701 ORTHO05D007058 3.1e-70 268.9 161 76.4
Carub.0006s3407 Capsella rubella HOM05D005701 ORTHO05D007058 8.9e-70 267.3 184 69.6
ECA248G1579 Erigeron canadensis HOM05D005701 ORTHO05D007058 8.9e-70 267.3 192 65.6
Thhalv10028980m.g Eutrema salsugineum HOM05D005701 ORTHO05D007058 1.5e-69 266.5 166 73.5
BolC9t53172H Brassica oleracea HOM05D005701 ORTHO05D007058 2.0e-69 266.2 181 70.2
C09p02410 Brassica napus HOM05D005701 ORTHO05D007058 3.4e-69 265.4 181 70.2
Manes.01G211300 Manihot esculenta HOM05D005701 ORTHO05D007058 5.8e-69 264.6 154 79.9
CARHR251350 Cardamine hirsuta HOM05D005701 ORTHO05D007058 9.8e-69 263.8 162 74.7
BcaB01g02494 Brassica carinata HOM05D005701 ORTHO05D007058 1.7e-68 263.1 182 67.6
BolC3t16031H Brassica oleracea HOM05D005701 ORTHO05D007058 8.3e-68 260.8 184 67.4
Thecc.01G285700 Theobroma cacao HOM05D005701 ORTHO05D007058 8.3e-68 260.8 186 65.6
BcaC01g06714 Brassica carinata HOM05D005701 ORTHO05D007058 1.1e-67 260.4 184 67.4
C03p37390 Brassica napus HOM05D005701 ORTHO05D007058 1.1e-67 260.4 184 67.4
BraA03t12248Z Brassica rapa HOM05D005701 ORTHO05D007058 1.4e-67 260.0 184 67.4
A03p30690 Brassica napus HOM05D005701 ORTHO05D007058 2.4e-67 259.2 184 67.4
unitig_8.g3319 Utricularia gibba HOM05D005701 ORTHO05D007058 4.1e-67 258.5 177 66.7
AUR62036778 Chenopodium quinoa HOM05D005701 ORTHO05D007058 1.0e-65 253.8 227 55.9
HPP92_010620 Vanilla planifolia HOM05D005701 ORTHO05D007058 2.3e-65 252.7 184 66.3
CDE08G1024 Ceratophyllum demersum HOM05D005701 ORTHO05D007058 7.3e-64 247.7 184 63.6
Atru.chr5.1332 Acer truncatum HOM05D005701 ORTHO05D007058 1.6e-63 246.5 152 75.7
Gorai.008G006100 Gossypium raimondii HOM05D005701 ORTHO05D007058 4.7e-63 245.0 154 75.3
Zm00001eb410800 Zea mays HOM05D005701 ORTHO05D007058 6.2e-63 244.6 174 65.5
SalBow3G3506 Salvia bowleyana HOM05D005701 ORTHO05D007058 1.1e-62 243.8 163 67.5
Cc01_g03720 Coffea canephora HOM05D005701 ORTHO05D007058 1.4e-62 243.4 140 77.9
Os12g0529400 Oryza sativa ssp. japonica HOM05D005701 ORTHO05D007058 3.1e-62 242.3 159 68.6
Zm00001eb137840 Zea mays HOM05D005701 ORTHO05D007058 2.6e-61 239.2 177 64.4
Zm00001eb410760 Zea mays HOM05D005701 ORTHO05D007058 9.8e-61 237.3 180 63.3
SGA_v2.0_scaffold172G39038 Striga asiatica HOM05D005701 ORTHO05D007058 1.7e-60 236.5 161 70.8
BcaB01g01993 Brassica carinata HOM05D005701 ORTHO05D007058 3.7e-60 235.3 143 76.2
VMungo0720G2830 Vigna mungo HOM05D005701 ORTHO05D007058 1.4e-59 233.4 149 73.8
Oeu047892.2 Olea europaea HOM05D005701 ORTHO05D007058 5.4e-59 231.5 268 47.4
TPR.G13316 Trifolium pratense HOM05D005701 ORTHO05D007058 5.1e-57 224.9 238 51.7
MSTRG.12575 Avicennia marina HOM05D005701 ORTHO05D007058 2.8e-55 219.2 193 53.9
Rhsim13G0021400 Rhododendron simsii HOM05D005701 ORTHO05D007058 5.8e-53 211.5 150 66.7
Cpa.g.sc9.126 Carica papaya HOM05D005701 ORTHO05D007058 6.4e-52 208.0 133 74.4
Pp3c4_12750 Physcomitrium patens HOM05D005701 ORTHO05D007058 6.0e-50 201.4 150 61.3
FvH4_2g24150 Fragaria vesca HOM05D005701 ORTHO05D007058 7.8e-50 201.1 126 74.6
Pp3c4_12660 Physcomitrium patens HOM05D005701 ORTHO05D007058 1.0e-49 200.7 149 61.1
SMO164G0245 Selaginella moellendorffii HOM05D005701 ORTHO05D007058 3.0e-49 199.1 153 60.8
Cc00_g05320 Coffea canephora HOM05D005701 ORTHO05D007058 3.1e-46 189.1 169 55.0
vmacro02539 Vaccinium macrocarpon HOM05D005701 ORTHO05D007058 5.2e-46 188.3 123 71.5
MBI19_g33449_MAGBIO Magnolia biondii HOM05D005701 ORTHO05D007058 7.6e-45 184.5 105 77.1
MBI19_g39288_MAGBIO Magnolia biondii HOM05D005701 ORTHO05D007058 2.2e-44 183.0 104 76.9
CAN.G996.16 Capsicum annuum HOM05D005701 ORTHO05D007058 7.1e-43 177.9 124 65.3
QL02p081958 Quercus lobata HOM05D005701 ORTHO05D007058 2.1e-42 176.4 97 82.5
ATR0626G241 Amborella trichopoda HOM05D005701 ORTHO05D007058 1.3e-41 173.7 128 63.3
Zm00001eb440220 Zea mays HOM05D005701 ORTHO05D007058 3.9e-41 172.2 128 63.3
Gohir.D12G006100 Gossypium hirsutum HOM05D005701 ORTHO05D007058 5.1e-41 171.8 94 84.0
Rhsim13G0021300 Rhododendron simsii HOM05D005701 ORTHO05D007058 1.2e-37 160.6 224 39.7
CBR_g38020 Chara braunii HOM05D005701 ORTHO05D007058 9.3e-35 151.0 120 55.0
AUR62033690 Chenopodium quinoa HOM05D005701 ORTHO05D007058 3.5e-34 149.1 91 73.6
Zm00001eb410780 Zea mays HOM05D005701 ORTHO05D007058 4.6e-34 148.7 132 56.1
AagrBONN_evm.TU.Sc2ySwM_117.1970 Anthoceros agrestis HOM05D005701 ORTHO05D007058 1.1e-32 144.1 136 51.5
Ah.04g164000 Amaranthus hybridus HOM05D005701 ORTHO05D007058 1.1e-30 137.5 90 64.4
Os12g0529300 Oryza sativa ssp. japonica HOM05D005701 ORTHO05D007058 7.6e-29 131.3 84 69.0
CSS0004068 Camellia sinensis var. sinensis HOM05D005701 ORTHO05D007058 1.1e-27 127.5 184 41.8
C09p02610 Brassica napus HOM05D005701 ORTHO05D007058 9.6e-24 114.4 81 64.2
Lsat_1_v5_gn_4_17561 Lactuca sativa HOM05D005701 ORTHO05D007058 1.3e-23 114.0 98 60.2
HPP92_017198 Vanilla planifolia HOM05D005701 ORTHO05D051565 5.5e-19 98.6 184 36.4
Rhsim11G0018300 Rhododendron simsii HOM05D003327 ORTHO05D004535 4.9e-12 75.5 83 50.6


User provided reference genes

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