Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.08G098800 Carya illinoinensis HOM05D000002 ORTHO05D004433 1.2e-82 309.7 148 100.0
Cc04_g10140 Coffea canephora HOM05D000002 ORTHO05D004433 1.1e-46 190.3 152 60.5
FvH4_5g31431 Fragaria vesca HOM05D000002 ORTHO05D004433 1.2e-42 176.8 152 57.9
RcHm_v2.0_Chr3g0481931 Rosa chinensis HOM05D000002 ORTHO05D000001 6.8e-41 171.0 152 55.9
Sopen03g027090 Solanum pennellii HOM05D000002 ORTHO05D002065 1.2e-34 150.2 145 53.1
BolC8t49584H Brassica oleracea HOM05D000002 ORTHO05D004433 5.2e-33 144.8 135 51.1
Sopen11g022370 Solanum pennellii HOM05D000036 ORTHO05D005472 6.8e-33 144.4 124 54.8
Cc05_g05430 Coffea canephora HOM05D000002 ORTHO05D004433 1.3e-31 140.2 126 56.3
Sopen09g011970 Solanum pennellii HOM05D008571 ORTHO05D011280 4.1e-30 135.2 123 53.7
SHI38827 Sapria himalayana HOM05D000002 ORTHO05D004433 4.7e-26 121.7 141 48.2
SHI45609 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-25 120.6 141 46.8
SHI14609 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-25 120.2 141 46.8
SHI44323 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-25 120.2 141 47.5
SHI04168 Sapria himalayana HOM05D000002 ORTHO05D004433 6.8e-25 117.9 141 46.8
PGR044G1025 Punica granatum HOM05D000097 ORTHO05D000041 4.4e-24 115.2 110 53.6
SHI18328 Sapria himalayana HOM05D000002 ORTHO05D000001 5.8e-24 114.8 142 46.5
PGR044G0355 Punica granatum HOM05D000097 ORTHO05D000041 2.9e-23 112.5 130 43.8
TAR610G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.7e-23 112.1 141 41.1
MD01G1096700 Malus domestica HOM05D000002 ORTHO05D000001 4.9e-23 111.7 141 42.6
ECA238G3349 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.4e-22 108.2 142 38.7
ECA234G3440 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-21 106.7 124 41.1
ECA236G5067 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-21 106.3 125 44.8
ECA240G4274 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.5e-21 105.5 143 39.9
PGR044G2365 Punica granatum HOM05D000097 ORTHO05D000041 3.5e-21 105.5 110 48.2
Sopen02g016810 Solanum pennellii HOM05D008571 ORTHO05D004433 3.5e-21 105.5 129 46.5
SHI06746 Sapria himalayana HOM05D000002 ORTHO05D004433 7.8e-21 104.4 141 44.7
ECA233G1874 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-20 104.0 143 39.2
ECA246G2496 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-20 102.8 143 39.2
SHI05549 Sapria himalayana HOM05D000002 ORTHO05D004433 2.3e-20 102.8 124 41.9
Sopen09g027930 Solanum pennellii HOM05D000002 ORTHO05D004433 2.3e-20 102.8 140 37.1
SHI12756 Sapria himalayana HOM05D000002 ORTHO05D004433 3.0e-20 102.4 141 43.3
ECA240G0479 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.6e-20 101.3 142 38.7
PGR044G1072 Punica granatum HOM05D000097 ORTHO05D000041 8.6e-20 100.9 129 41.9
ECA238G4301 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-19 100.5 124 38.7
Nn8g39416 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.5e-19 100.1 132 39.4
ECA234G1536 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-19 99.8 143 37.8
SHI49936 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-19 99.8 125 46.4
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.5e-19 99.4 138 38.4
SHI16256 Sapria himalayana HOM05D000002 ORTHO05D004433 2.5e-19 99.4 142 42.3
PGR044G1153 Punica granatum HOM05D000097 ORTHO05D000041 3.3e-19 99.0 123 43.1
PSO675G3339 Papaver somniferum HOM05D000002 ORTHO05D004433 7.3e-19 97.8 138 39.1
ECA246G3093 Erigeron canadensis HOM05D001467 ORTHO05D001214 1.2e-18 97.1 141 36.9
ECA247G3536 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-18 96.7 141 36.9
Nn8g40101 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.8e-18 95.9 143 35.7
ECA248G0687 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.6e-18 95.5 124 39.5
SHI10489 Sapria himalayana HOM05D000002 ORTHO05D004433 4.7e-18 95.1 106 48.1
Nn1g09492 Nelumbo nucifera HOM05D000002 ORTHO05D004433 6.2e-18 94.7 117 40.2
Nn4g23986 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.2e-18 94.7 135 37.0
ECA248G3794 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-17 93.6 125 40.0
SHI21269 Sapria himalayana HOM05D000002 ORTHO05D004433 1.8e-17 93.2 135 41.5
Ah.13g069620 Amaranthus hybridus HOM05D000002 ORTHO05D004433 2.3e-17 92.8 137 36.5
Ah.16g108610 Amaranthus hybridus HOM05D000002 ORTHO05D004433 4.0e-17 92.0 137 35.8
SHI07649 Sapria himalayana HOM05D000002 ORTHO05D004433 4.0e-17 92.0 140 41.4
SHI32919 Sapria himalayana HOM05D000002 ORTHO05D004433 4.0e-17 92.0 104 47.1
Ah.01g008310 Amaranthus hybridus HOM05D000002 ORTHO05D004433 5.2e-17 91.7 137 35.8
Thhalv10019725m.g Eutrema salsugineum HOM05D000002 ORTHO05D004433 5.2e-17 91.7 96 50.0
Sopen03g007650 Solanum pennellii HOM05D000002 ORTHO05D004433 8.9e-17 90.9 120 39.2
Nn5g27722 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.6e-16 89.4 127 38.6
Oeu035997.1 Olea europaea HOM05D000002 ORTHO05D004433 4.4e-16 88.6 107 44.9
Nn1g03239 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.7e-15 86.7 143 36.4
SHI45691 Sapria himalayana HOM05D000002 ORTHO05D004433 2.9e-15 85.9 107 46.7
Oeu012846.1 Olea europaea HOM05D003971 ORTHO05D004433 4.9e-15 85.1 108 42.6
Oeu034209.1 Olea europaea HOM05D000002 ORTHO05D004433 6.4e-15 84.7 110 43.6
SHI03937 Sapria himalayana HOM05D000002 ORTHO05D004433 1.4e-14 83.6 141 39.0
Ah.13g077590 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.9e-14 83.2 137 33.6
SHI43060 Sapria himalayana HOM05D000002 ORTHO05D004433 3.2e-14 82.4 103 45.6
SHI32313 Sapria himalayana HOM05D000002 ORTHO05D004433 5.4e-14 81.6 99 44.4
SHI04823 Sapria himalayana HOM05D000002 ORTHO05D004433 7.1e-14 81.3 120 41.7
Sopen00g007880 Solanum pennellii HOM05D000002 ORTHO05D004433 7.1e-14 81.3 107 39.3
Sopen05g013900 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-13 80.5 61 55.7
ECA238G4719 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.6e-13 78.6 115 37.4
Nn8g40511 Nelumbo nucifera HOM05D000002 ORTHO05D000001 4.6e-13 78.6 115 33.9
Oeu022773.1 Olea europaea HOM05D000002 ORTHO05D004433 7.8e-13 77.8 107 41.1
SHI51732 Sapria himalayana HOM05D000002 ORTHO05D000001 7.8e-13 77.8 97 43.3
ECA233G2071 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-12 77.4 104 40.4
CSS0021348 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 1.3e-12 77.0 141 34.8
ECA233G2777 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-12 76.6 121 38.8
Sopen09g028980 Solanum pennellii HOM05D000002 ORTHO05D004433 3.9e-12 75.5 119 32.8
ECA248G0669 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.1e-12 75.1 119 37.8
Nn4g25779 Nelumbo nucifera HOM05D000002 ORTHO05D004433 5.1e-12 75.1 145 29.0
Oeu003015.1 Olea europaea HOM05D000002 ORTHO05D004433 5.1e-12 75.1 107 37.4
Nn1g01470 Nelumbo nucifera HOM05D000002 ORTHO05D004433 6.6e-12 74.7 141 34.0
Oeu055579.1 Olea europaea HOM05D000002 ORTHO05D004433 8.6e-12 74.3 107 40.2
Nn1g02545 Nelumbo nucifera HOM05D000002 ORTHO05D004433 3.3e-11 72.4 143 29.4
Oeu001115.1 Olea europaea HOM05D000002 ORTHO05D004433 3.3e-11 72.4 96 43.8
Dinv02026 Davidia involucrata HOM05D028709 ORTHO05D004433 4.3e-11 72.0 99 37.4
Ah.04g159010 Amaranthus hybridus HOM05D000002 ORTHO05D004433 7.3e-11 71.2 102 36.3
ECA246G0537 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.8e-10 69.3 98 35.7
Nn2g15808 Nelumbo nucifera HOM05D000006 ORTHO05D004433 4.7e-10 68.6 126 31.0
Ah.03g145180 Amaranthus hybridus HOM05D000002 ORTHO05D004433 6.2e-10 68.2 102 35.3
Glyma.01G070601 Glycine max HOM05D000002 ORTHO05D004433 6.2e-10 68.2 100 34.0
Ah.16g106880 Amaranthus hybridus HOM05D000002 ORTHO05D004433 8.1e-10 67.8 102 33.3
Cpa.g.sc11.103 Carica papaya HOM05D000002 ORTHO05D004433 8.1e-10 67.8 93 34.4
SHI18425 Sapria himalayana HOM05D000002 ORTHO05D004433 8.1e-10 67.8 74 45.9
MD14G1034300 Malus domestica HOM05D000038 ORTHO05D004433 1.4e-09 67.0 93 39.8
SHI00406 Sapria himalayana HOM05D000002 ORTHO05D004433 1.4e-09 67.0 74 44.6
SHI10029 Sapria himalayana HOM05D000002 ORTHO05D004433 2.4e-09 66.2 74 43.2
MD01G1222200 Malus domestica HOM05D000002 ORTHO05D004433 3.1e-09 65.9 126 31.7
VMungo1383G2229 Vigna mungo HOM05D000002 ORTHO05D000001 3.1e-09 65.9 123 31.7
ECA233G2147 Erigeron canadensis HOM05D000509 ORTHO05D004433 5.2e-09 65.1 83 42.2
Sopen03g008290 Solanum pennellii HOM05D000002 ORTHO05D004433 5.2e-09 65.1 102 37.3
Nn1g02075 Nelumbo nucifera HOM05D000002 ORTHO05D004433 6.8e-09 64.7 88 35.2
FvH4_2g04952 Fragaria vesca HOM05D000002 ORTHO05D000047 8.9e-09 64.3 134 31.3
Rhsim05G0196600 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.2e-08 63.9 139 25.9
VMungo0720G2943 Vigna mungo HOM05D001260 ORTHO05D002424 1.5e-08 63.5 123 30.9
AUR62003774 Chenopodium quinoa HOM05D000002 ORTHO05D000047 3.4e-08 62.4 119 31.1
Sopen12g010550 Solanum pennellii HOM05D008571 ORTHO05D011280 9.9e-08 60.8 61 54.1
Gohir.D08G274150 Gossypium hirsutum HOM05D000002 ORTHO05D004433 1.3e-07 60.5 107 36.4
Gorai.004G292700 Gossypium raimondii HOM05D000002 ORTHO05D004433 1.3e-07 60.5 107 36.4
Prupe.7G032100 Prunus persica HOM05D000002 ORTHO05D004433 1.3e-07 60.5 73 42.5
Sabra13G0070400 Salix brachista HOM05D000002 ORTHO05D000001 1.3e-07 60.5 146 25.3
Sopen10g024020 Solanum pennellii HOM05D008571 ORTHO05D011280 1.3e-07 60.5 98 38.8
Sopen07g026850 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-07 60.1 124 29.8
Gohir.D10G094150 Gossypium hirsutum HOM05D000002 ORTHO05D004433 2.2e-07 59.7 88 40.9
Glyma.07G117100 Glycine max HOM05D000002 ORTHO05D004433 2.9e-07 59.3 94 34.0
PSO541G4865 Papaver somniferum HOM05D000002 ORTHO05D000001 2.9e-07 59.3 134 29.1
PSO832G3798 Papaver somniferum HOM05D000002 ORTHO05D000001 2.9e-07 59.3 132 28.8
Sopen11g025380 Solanum pennellii HOM05D000002 ORTHO05D000001 2.9e-07 59.3 126 31.0
Sopen07g021240 Solanum pennellii HOM05D000002 ORTHO05D000047 3.8e-07 58.9 126 31.0
Hma1.2p1_0020F.1_g014040 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.9e-07 58.5 141 25.5
Nn3g20324 Nelumbo nucifera HOM05D000002 ORTHO05D004433 4.9e-07 58.5 87 33.3
Thecc.03G106900 Theobroma cacao HOM05D000002 ORTHO05D004433 4.9e-07 58.5 82 31.7
Oeu033717.1 Olea europaea HOM05D000002 ORTHO05D004433 6.4e-07 58.2 101 36.6
TPR.G39922 Trifolium pratense HOM05D000002 ORTHO05D000047 6.4e-07 58.2 133 27.1
Thhalv10000485m.g Eutrema salsugineum HOM05D008571 ORTHO05D004433 8.4e-07 57.8 47 51.1
Nn1g06847 Nelumbo nucifera HOM05D000002 ORTHO05D004433 8.4e-07 57.8 99 35.4
PSO066G0001 Papaver somniferum HOM05D000002 ORTHO05D000001 8.4e-07 57.8 134 28.4
RcHm_v2.0_Chr7g0230661 Rosa chinensis HOM05D000097 ORTHO05D000041 8.4e-07 57.8 111 31.5
SHI47496 Sapria himalayana HOM05D000002 ORTHO05D004433 1.1e-06 57.4 50 56.0
Sopen09g007300 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-06 57.4 124 29.0
SHI18909 Sapria himalayana HOM05D000002 ORTHO05D004433 1.4e-06 57.0 141 29.8
Sopen05g009210 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-06 57.0 124 29.0
TPR.G38892 Trifolium pratense HOM05D000002 ORTHO05D000047 1.4e-06 57.0 121 28.9
Nn4g24889 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.9e-06 56.6 75 33.3
Nn5g30038 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.9e-06 56.6 76 35.5
SHI39435 Sapria himalayana HOM05D000002 ORTHO05D004433 1.9e-06 56.6 35 68.6
SHI39437 Sapria himalayana HOM05D000002 ORTHO05D004433 1.9e-06 56.6 35 68.6
TPR.G13341 Trifolium pratense HOM05D000002 ORTHO05D000047 1.9e-06 56.6 121 28.1
GSVIVG01011219001 Vitis vinifera HOM05D000097 ORTHO05D000041 3.2e-06 55.8 88 31.8
GSVIVG01026533001 Vitis vinifera HOM05D000097 ORTHO05D000041 3.2e-06 55.8 57 42.1
FvH4_5g37185 Fragaria vesca HOM05D000097 ORTHO05D009232 5.4e-06 55.1 100 35.0
TAR009G0003 Trochodendron aralioides HOM05D008571 ORTHO05D004433 5.4e-06 55.1 48 60.4
Atru.chr9.1414 Acer truncatum HOM05D000002 ORTHO05D000001 7.1e-06 54.7 131 28.2
FAN18G4446 Fragaria x ananassa HOM05D000097 ORTHO05D000041 7.1e-06 54.7 85 31.8
Oeu026048.1 Olea europaea HOM05D000002 ORTHO05D000001 7.1e-06 54.7 80 38.8
Sopen06g004790 Solanum pennellii HOM05D000002 ORTHO05D000001 7.1e-06 54.7 124 25.8
TAR625G0793 Trochodendron aralioides HOM05D000097 ORTHO05D000041 7.1e-06 54.7 109 25.7
Ah.07g206720 Amaranthus hybridus HOM05D000002 ORTHO05D000047 9.2e-06 54.3 119 26.9
ECA240G3347 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.2e-06 54.3 61 45.9
ECA247G1586 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.2e-06 54.3 63 38.1
FAN04G1606 Fragaria x ananassa HOM05D000097 ORTHO05D000041 9.2e-06 54.3 85 32.9
FAN04G1975 Fragaria x ananassa HOM05D001790 ORTHO05D007425 9.2e-06 54.3 85 32.9
FAN13G3280 Fragaria x ananassa HOM05D000097 ORTHO05D000041 9.2e-06 54.3 99 32.3
Sopen10g022730 Solanum pennellii HOM05D000004 ORTHO05D000002 9.2e-06 54.3 95 29.5


User provided reference genes

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