Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.08G090800 Carya illinoinensis HOM05D006641 ORTHO05D007573 9.8e-98 360.1 185 100.0
Cfa005814 Carpinus fangiana HOM05D006641 ORTHO05D007573 1.4e-43 180.3 195 57.4
CiPaw.07G116300 Carya illinoinensis HOM05D006641 ORTHO05D007573 9.1e-43 177.6 200 55.0
QL12p020167 Quercus lobata HOM05D006641 ORTHO05D007573 1.2e-42 177.2 194 54.6
Duzib138G1609 Durio zibethinus HOM05D006641 ORTHO05D007573 2.1e-39 166.4 198 49.0
Duzib133G1491 Durio zibethinus HOM05D006641 ORTHO05D007573 3.3e-37 159.1 198 46.5
Thecc.01G311800 Theobroma cacao HOM05D006641 ORTHO05D007573 7.4e-37 157.9 200 49.0
Atru.chr5.1033 Acer truncatum HOM05D006641 ORTHO05D007573 9.7e-37 157.5 202 49.0
Medtr1g087230 Medicago truncatula HOM05D006641 ORTHO05D007573 6.3e-36 154.8 196 48.5
VMungo0007G0001 Vigna mungo HOM05D006641 ORTHO05D007573 1.4e-35 153.7 198 46.0
Duzib211G0496 Durio zibethinus HOM05D006641 ORTHO05D007573 1.8e-35 153.3 198 47.0
Haze_05028 Corylus avellana HOM05D006641 ORTHO05D007573 2.4e-35 152.9 175 56.0
Gohir.A07G127900 Gossypium hirsutum HOM05D006641 ORTHO05D007573 1.2e-34 150.6 201 47.3
Gorai.001G143700 Gossypium raimondii HOM05D006641 ORTHO05D007573 7.7e-34 147.9 201 46.8
Gohir.D07G132300 Gossypium hirsutum HOM05D006641 ORTHO05D007573 1.0e-33 147.5 201 46.8
Potri.002G196900 Populus trichocarpa HOM05D006641 ORTHO05D007573 5.0e-33 145.2 200 46.5
Phvul.007G214900 Phaseolus vulgaris HOM05D006641 ORTHO05D007573 6.5e-33 144.8 196 45.9
COL.COLO4_23247 Corchorus olitorius HOM05D006641 ORTHO05D007573 8.5e-33 144.4 200 44.5
Glyma.10G013800 Glycine max HOM05D006641 ORTHO05D007573 8.5e-33 144.4 198 43.4
Oeu008464.1 Olea europaea HOM05D006641 ORTHO05D007573 8.5e-33 144.4 196 47.4
Psat6g162160 Pisum sativum HOM05D006641 ORTHO05D007573 8.5e-33 144.4 200 44.5
Prupe.8G270900 Prunus persica HOM05D006641 ORTHO05D007573 1.1e-32 144.1 199 49.2
Ca_10290_v3 Cicer arietinum L. HOM05D006641 ORTHO05D007573 1.9e-32 143.3 195 46.2
Ca_30054_v3 Cicer arietinum L. HOM05D006641 ORTHO05D007573 1.9e-32 143.3 195 46.2
TPR.G19761 Trifolium pratense HOM05D006641 ORTHO05D007573 3.2e-32 142.5 199 45.7
CSS0030498 Camellia sinensis var. sinensis HOM05D006641 ORTHO05D007573 9.4e-32 141.0 194 44.3
Ciclev10021856m.g Citrus clementina HOM05D006641 ORTHO05D007573 9.4e-32 141.0 192 48.4
Sabra14G0090500 Salix brachista HOM05D006641 ORTHO05D007573 9.4e-32 141.0 197 46.7
Manes.05G002600 Manihot esculenta HOM05D006641 ORTHO05D007573 1.2e-31 140.6 195 47.7
Sabra02G0160400 Salix brachista HOM05D006641 ORTHO05D007573 1.2e-31 140.6 199 45.2
TWI36G0114 Tripterygium wilfordii HOM05D006641 ORTHO05D007573 1.2e-31 140.6 201 44.8
Potri.014G122100 Populus trichocarpa HOM05D006641 ORTHO05D007573 7.9e-31 137.9 197 45.7
Hma1.2p1_0486F.1_g163110 Hydrangea macrophylla HOM05D006641 ORTHO05D007573 3.9e-30 135.6 186 44.6
Hma1.2p1_0486F.1_g163121 Hydrangea macrophylla HOM05D006641 ORTHO05D007573 3.9e-30 135.6 186 44.6
Gohir.A12G125900 Gossypium hirsutum HOM05D006641 ORTHO05D007573 8.8e-30 134.4 200 44.5
MD03G1296400 Malus domestica HOM05D006641 ORTHO05D007573 1.5e-29 133.7 207 46.4
Glyma.03G218800 Glycine max HOM05D006641 ORTHO05D007573 2.6e-29 132.9 196 43.4
Glyma.19G215600 Glycine max HOM05D006641 ORTHO05D007573 2.6e-29 132.9 198 43.4
Cpa.g.sc18.26 Carica papaya HOM05D006641 ORTHO05D007573 3.3e-29 132.5 202 43.6
PGSC0003DMG400009037 Solanum tuberosum HOM05D006641 ORTHO05D007573 5.7e-29 131.7 205 41.0
Phvul.001G212200 Phaseolus vulgaris HOM05D006641 ORTHO05D007573 7.4e-29 131.3 193 40.9
Glyma.02G013200 Glycine max HOM05D006641 ORTHO05D007573 1.3e-28 130.6 194 40.2
Gohir.A08G119133 Gossypium hirsutum HOM05D006641 ORTHO05D007573 2.2e-28 129.8 203 41.9
Lj1g0024392 Lotus japonicus HOM05D006641 ORTHO05D007573 2.2e-28 129.8 195 43.1
Gohir.D08G139900 Gossypium hirsutum HOM05D006641 ORTHO05D007573 2.8e-28 129.4 203 42.4
Gorai.004G144000 Gossypium raimondii HOM05D006641 ORTHO05D007573 2.8e-28 129.4 203 42.4
RcHm_v2.0_Chr7g0241631 Rosa chinensis HOM05D006641 ORTHO05D007573 2.8e-28 129.4 200 44.0
Sed0015554 Sechium edule HOM05D006641 ORTHO05D007573 4.8e-28 128.6 194 39.7
Lalb_Chr02g0146781 Lupinus albus HOM05D006641 ORTHO05D007573 1.1e-27 127.5 155 45.8
MD11G1315800 Malus domestica HOM05D006641 ORTHO05D007573 1.1e-27 127.5 206 45.1
Nitab4.5_0001301g0080 Nicotiana tabacum HOM05D006641 ORTHO05D007573 1.1e-27 127.5 198 40.9
VMungo1383G0778 Vigna mungo HOM05D006641 ORTHO05D007573 1.1e-27 127.5 154 48.7
FAN13G0974 Fragaria x ananassa HOM05D001136 ORTHO05D007573 1.4e-27 127.1 184 42.4
Nn3g21666 Nelumbo nucifera HOM05D006641 ORTHO05D007573 1.4e-27 127.1 198 42.9
PSO210G6531 Papaver somniferum HOM05D006641 ORTHO05D007573 1.4e-27 127.1 197 41.6
Solyc01g079550.2 Solanum lycopersicum HOM05D006641 ORTHO05D007573 1.4e-27 127.1 206 41.3
CsaV3_7G029900 Cucumis sativus L. HOM05D006641 ORTHO05D007573 2.4e-27 126.3 199 42.2
Lalb_Chr15g0078301 Lupinus albus HOM05D006641 ORTHO05D007573 2.4e-27 126.3 195 41.5
Lj5g0026629 Lotus japonicus HOM05D006641 ORTHO05D007573 3.1e-27 125.9 198 41.4
Sopen01g031320 Solanum pennellii HOM05D006641 ORTHO05D007573 3.1e-27 125.9 206 40.8
Peaxi162Scf00691g00003 Petunia axillaris HOM05D006641 ORTHO05D007573 4.1e-27 125.6 205 41.0
MELO3C015931.2 Cucumis melo HOM05D006641 ORTHO05D007573 1.2e-26 124.0 198 42.9
FAN04G2480 Fragaria x ananassa HOM05D001136 ORTHO05D007573 1.2e-26 124.0 191 40.8
ClCG09G005170 Citrullus lanatus HOM05D006641 ORTHO05D007573 1.6e-26 123.6 199 40.7
FvH4_5g39350 Fragaria vesca HOM05D006641 ORTHO05D007573 2.0e-26 123.2 194 43.3
Manes.01G226800 Manihot esculenta HOM05D006641 ORTHO05D007573 2.0e-26 123.2 195 43.1
TAR362G0542 Trochodendron aralioides HOM05D006641 ORTHO05D007573 2.0e-26 123.2 195 43.1
PSO761G0656 Papaver somniferum HOM05D006641 ORTHO05D007573 2.6e-26 122.9 197 41.6
Dinv33109 Davidia involucrata HOM05D006641 ORTHO05D007573 3.5e-26 122.5 191 45.5
TAR589G0002 Trochodendron aralioides HOM05D006641 ORTHO05D007573 3.5e-26 122.5 155 44.5
TAR633G2793 Trochodendron aralioides HOM05D006641 ORTHO05D007573 3.5e-26 122.5 155 44.5
Medtr7g109410 Medicago truncatula HOM05D006641 ORTHO05D007573 5.9e-26 121.7 196 39.8
Nitab4.5_0008979g0010 Nicotiana tabacum HOM05D006641 ORTHO05D007573 7.7e-26 121.3 192 41.1
Eucgr.H01054 Eucalyptus grandis HOM05D006641 ORTHO05D007573 1.0e-25 120.9 154 47.4
FAN08G0230 Fragaria x ananassa HOM05D001136 ORTHO05D007573 1.7e-25 120.2 191 40.3
FAN08G2922 Fragaria x ananassa HOM05D006641 ORTHO05D007573 1.7e-25 120.2 191 40.3
FAN18G1732 Fragaria x ananassa HOM05D001136 ORTHO05D007573 1.7e-25 120.2 191 40.3
CANSAT25G1473 Cannabis sativa HOM05D006641 ORTHO05D007573 2.2e-25 119.8 209 41.1
Hma1.2p1_0212F.1_g090010 Hydrangea macrophylla HOM05D006641 ORTHO05D007573 2.2e-25 119.8 203 40.9
vmacro02409 Vaccinium macrocarpon HOM05D006641 ORTHO05D007573 2.9e-25 119.4 202 42.6
MBI18_g28444_MAGBIO Magnolia biondii HOM05D006641 ORTHO05D007573 6.5e-25 118.2 155 44.5
Psat3g020560 Pisum sativum HOM05D006641 ORTHO05D007573 8.5e-25 117.9 159 45.3
Aqoxy2G01829 Aquilegia oxysepala HOM05D006641 ORTHO05D007573 2.1e-23 113.2 194 38.7
DCAR_002902 Daucus carota HOM05D006641 ORTHO05D007573 2.1e-23 113.2 194 37.6
arahy.Tifrunner.gnm1.ann1.DB9XMS Arachis hypogaea HOM05D006641 ORTHO05D007573 2.7e-23 112.8 201 39.8
Gohir.D12G129400 Gossypium hirsutum HOM05D006641 ORTHO05D007573 2.7e-23 112.8 198 37.9
Gorai.008G140500 Gossypium raimondii HOM05D006641 ORTHO05D007573 2.7e-23 112.8 198 37.9
SGA_v2.0_scaffold376G50279 Striga asiatica HOM05D006641 ORTHO05D007573 3.6e-23 112.5 195 38.5
DCAR_005769 Daucus carota HOM05D006641 ORTHO05D007573 4.7e-23 112.1 199 38.2
SalBow3G3599 Salvia bowleyana HOM05D006641 ORTHO05D007573 8.0e-23 111.3 189 38.6
Migut.D00088 Erythranthe guttata HOM05D006641 ORTHO05D007573 1.0e-22 110.9 190 40.0
PGR119G1902 Punica granatum HOM05D006641 ORTHO05D007573 3.0e-22 109.4 198 38.4
AUR62024668 Chenopodium quinoa HOM05D006641 ORTHO05D007573 4.0e-22 109.0 199 39.7
Ah.11g049320 Amaranthus hybridus HOM05D000446 ORTHO05D000321 5.2e-22 108.6 197 40.6
EL10As5g23515 Beta vulgaris HOM05D006641 ORTHO05D007573 1.2e-21 107.5 197 40.6
Rhsim13G0005400 Rhododendron simsii HOM05D006641 ORTHO05D007573 1.5e-21 107.1 202 38.6
Lsat_1_v5_gn_9_2880 Lactuca sativa HOM05D006641 ORTHO05D007573 3.3e-21 105.9 201 35.3
AUR62011824 Chenopodium quinoa HOM05D006641 ORTHO05D007573 1.1e-19 100.9 199 38.2
MBI19_g24818_MAGBIO Magnolia biondii HOM05D006641 ORTHO05D007573 5.3e-19 98.6 180 36.7
Actinidia27614 Actinidia chinensis HOM05D006641 ORTHO05D007573 9.1e-19 97.8 175 40.6
TPR.G4797 Trifolium pratense HOM05D006641 ORTHO05D007573 9.1e-19 97.8 152 40.1
ECA247G2557 Erigeron canadensis HOM05D006641 ORTHO05D007573 7.7e-18 94.7 195 37.4
HanXRQChr15g0465011 Helianthus annuus HOM05D006641 ORTHO05D007573 3.8e-17 92.4 156 38.5
Cc01_g21330 Coffea canephora HOM05D006641 ORTHO05D007573 1.0e-14 84.3 232 32.3
ATR0706G193 Amborella trichopoda HOM05D006641 ORTHO05D007573 1.2e-13 80.9 200 30.5
arahy.Tifrunner.gnm1.ann1.Q9I7GX Arachis hypogaea HOM05D006641 ORTHO05D007573 4.4e-13 79.0 166 35.5
THA.LOC104801302 Tarenaya hassleriana HOM05D006641 ORTHO05D007573 1.1e-11 74.3 218 32.1
PSO170G1046 Papaver somniferum HOM05D006641 ORTHO05D007573 1.8e-11 73.6 207 30.9
PSO357G0224 Papaver somniferum HOM05D006641 ORTHO05D007573 9.1e-11 71.2 207 30.9
CARHR249590 Cardamine hirsuta HOM05D006641 ORTHO05D007573 2.9e-09 66.2 206 31.1
C09p01650 Brassica napus HOM05D001136 ORTHO05D007573 1.5e-08 63.9 227 29.5
Eucgr.K03540 Eucalyptus grandis HOM05D006641 ORTHO05D007573 1.5e-08 63.9 216 29.2
Actinidia21410 Actinidia chinensis HOM05D000446 ORTHO05D000321 4.2e-08 62.4 94 44.7
BcaC04g24036 Brassica carinata HOM05D001136 ORTHO05D007573 7.2e-08 61.6 227 29.1
BolC9t53098H Brassica oleracea HOM05D001136 ORTHO05D007573 7.2e-08 61.6 227 29.1
BraA09t35814Z Brassica rapa HOM05D001136 ORTHO05D007573 1.2e-07 60.8 224 30.4
Sp6g01980 Schrenkiella parvula HOM05D006641 ORTHO05D007573 4.7e-07 58.9 151 33.1
A09p01550 Brassica napus HOM05D006641 ORTHO05D007573 1.4e-06 57.4 233 29.2
AL6G51140 Arabidopsis lyrata HOM05D006641 ORTHO05D007573 6.8e-06 55.1 147 33.3
AT4G02090 Arabidopsis thaliana HOM05D006641 ORTHO05D007573 6.8e-06 55.1 195 31.3


User provided reference genes

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