Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.08G087700 Carya illinoinensis HOM05D006547 ORTHO05D008112 2.3e-64 248.8 131 100.0
CiPaw.07G119400 Carya illinoinensis HOM05D006547 ORTHO05D008112 2.9e-27 125.6 138 61.6
QL12p019056 Quercus lobata HOM05D006547 ORTHO05D008112 1.5e-23 113.2 127 63.0
Haze_05072 Corylus avellana HOM05D006547 ORTHO05D008112 3.7e-22 108.6 131 55.0
Cfa005764 Carpinus fangiana HOM05D006547 ORTHO05D008112 6.9e-21 104.4 120 55.8
Thecc.02G266700 Theobroma cacao HOM05D006547 ORTHO05D008112 2.6e-20 102.4 124 54.8
Duzib248G0337 Durio zibethinus HOM05D006547 ORTHO05D008112 4.5e-20 101.7 125 55.2
TAR365G0268 Trochodendron aralioides HOM05D006547 ORTHO05D008112 3.8e-19 98.6 117 58.1
Potri.014G118300 Populus trichocarpa HOM05D006547 ORTHO05D008112 5.5e-18 94.7 126 54.0
Ciclev10022819m.g Citrus clementina HOM05D006547 ORTHO05D008112 1.2e-17 93.6 131 51.9
Potri.002G193300 Populus trichocarpa HOM05D006547 ORTHO05D008112 2.1e-17 92.8 128 53.1
Gohir.A12G145800 Gossypium hirsutum HOM05D006547 ORTHO05D008112 4.6e-17 91.7 125 51.2
Gohir.D12G150400 Gossypium hirsutum HOM05D006547 ORTHO05D008112 6.0e-17 91.3 125 51.2
Gorai.008G161900 Gossypium raimondii HOM05D006547 ORTHO05D008112 6.0e-17 91.3 125 51.2
Atru.chr5.966 Acer truncatum HOM05D006547 ORTHO05D008112 7.9e-17 90.9 131 41.2
Sabra02G0162800 Salix brachista HOM05D006547 ORTHO05D008112 1.8e-16 89.7 124 55.6
Sabra14G0087800 Salix brachista HOM05D006547 ORTHO05D008112 2.3e-16 89.4 127 52.0
Duzib251G0664 Durio zibethinus HOM05D006547 ORTHO05D008112 8.7e-16 87.4 126 51.6
Glyma.20G175000 Glycine max HOM05D006547 ORTHO05D008112 8.7e-16 87.4 121 52.1
Duzib268G0572 Durio zibethinus HOM05D006547 ORTHO05D008112 1.1e-15 87.0 125 52.0
TAR362G1145 Trochodendron aralioides HOM05D006547 ORTHO05D008112 1.5e-15 86.7 118 50.8
Glyma.10G217100 Glycine max HOM05D006547 ORTHO05D008112 5.7e-15 84.7 120 50.0
Manes.05G013600 Manihot esculenta HOM05D006547 ORTHO05D008112 2.8e-14 82.4 110 54.5
TAR633G2779 Trochodendron aralioides HOM05D006547 ORTHO05D008112 3.7e-14 82.0 131 47.3
Lalb_Chr03g0036161 Lupinus albus HOM05D006547 ORTHO05D008112 4.8e-14 81.6 97 55.7
COL.COLO4_23526 Corchorus olitorius HOM05D006547 ORTHO05D008112 6.3e-14 81.3 118 49.2
Manes.01G229900 Manihot esculenta HOM05D006547 ORTHO05D008112 6.3e-14 81.3 111 51.4
Dinv15146 Davidia involucrata HOM05D004325 ORTHO05D005470 1.1e-13 80.5 124 50.0
CSS0011798 Camellia sinensis var. sinensis HOM05D006547 ORTHO05D008112 1.4e-13 80.1 118 47.5
RcHm_v2.0_Chr3g0487231 Rosa chinensis HOM05D006547 ORTHO05D008112 1.4e-13 80.1 81 58.0
Oeu008480.1 Olea europaea HOM05D006547 ORTHO05D008112 1.8e-13 79.7 119 46.2
Oeu038038.1 Olea europaea HOM05D006547 ORTHO05D008112 2.4e-13 79.3 105 54.3
Hma1.2p1_0486F.1_g163490 Hydrangea macrophylla HOM05D006547 ORTHO05D008112 5.3e-13 78.2 123 44.7
Nitab4.5_0000363g0200 Nicotiana tabacum HOM05D006547 ORTHO05D008112 1.5e-12 76.6 86 50.0
Medtr1g096530 Medicago truncatula HOM05D006547 ORTHO05D008112 2.6e-12 75.9 62 64.5
TWI36G0249 Tripterygium wilfordii HOM05D006547 ORTHO05D008112 3.4e-12 75.5 133 45.1
arahy.Tifrunner.gnm1.ann1.BQK7VT Arachis hypogaea HOM05D006547 ORTHO05D008112 1.0e-11 73.9 76 59.2
Phvul.007G089100 Phaseolus vulgaris HOM05D006547 ORTHO05D008112 1.0e-11 73.9 76 61.8
CAN.G1280.37 Capsicum annuum HOM05D006547 ORTHO05D008112 1.3e-11 73.6 93 48.4
Gohir.D01G152800 Gossypium hirsutum HOM05D006547 ORTHO05D008112 1.3e-11 73.6 108 48.1
ECA247G3592 Erigeron canadensis HOM05D006547 ORTHO05D008112 1.7e-11 73.2 142 38.7
TWI18G0834 Tripterygium wilfordii HOM05D006547 ORTHO05D008112 2.2e-11 72.8 111 50.5
Ca_10619_v3 Cicer arietinum L. HOM05D006547 ORTHO05D008112 2.9e-11 72.4 125 45.6
FAN26G3307 Fragaria x ananassa HOM05D006547 ORTHO05D008112 2.9e-11 72.4 130 40.0
Lalb_Chr02g0141791 Lupinus albus HOM05D006547 ORTHO05D008112 5.0e-11 71.6 121 46.3
VMungo0720G0102 Vigna mungo HOM05D006547 ORTHO05D008112 5.0e-11 71.6 77 57.1
FvH4_1g26990 Fragaria vesca HOM05D006547 ORTHO05D008112 8.4e-11 70.9 108 46.3
FAN19G2346 Fragaria x ananassa HOM05D006547 ORTHO05D008112 8.4e-11 70.9 108 46.3
Sp4g29240 Schrenkiella parvula HOM05D006547 ORTHO05D008112 8.4e-11 70.9 96 43.8
Gorai.002G189200 Gossypium raimondii HOM05D006547 ORTHO05D008112 1.1e-10 70.5 104 49.0
Lj5g0010023 Lotus japonicus HOM05D006547 ORTHO05D008112 1.1e-10 70.5 88 50.0
FAN23G3047 Fragaria x ananassa HOM05D006547 ORTHO05D008112 1.4e-10 70.1 130 37.7
HanXRQChr10g0285031 Helianthus annuus HOM05D006547 ORTHO05D008112 1.9e-10 69.7 63 57.1
PGSC0003DMG401007298 Solanum tuberosum HOM05D006547 ORTHO05D008112 1.9e-10 69.7 95 49.5
Cpa.g.sc18.81 Carica papaya HOM05D006547 ORTHO05D008112 2.5e-10 69.3 93 45.2
BraA05t19055Z Brassica rapa HOM05D006547 ORTHO05D008112 4.2e-10 68.6 96 42.7
DCAR_018278 Daucus carota HOM05D006547 ORTHO05D008112 4.2e-10 68.6 98 43.9
Gohir.A01G157750 Gossypium hirsutum HOM05D006547 ORTHO05D008112 4.2e-10 68.6 86 52.3
Nitab4.5_0007407g0060 Nicotiana tabacum HOM05D006547 ORTHO05D008112 5.5e-10 68.2 63 55.6
A05p00570 Brassica napus HOM05D006547 ORTHO05D008112 7.2e-10 67.8 96 42.7
FAN28G2331 Fragaria x ananassa HOM05D006547 ORTHO05D008112 7.2e-10 67.8 130 36.9
HanXRQChr15g0465071 Helianthus annuus HOM05D006547 ORTHO05D008112 7.2e-10 67.8 94 44.7
CANSAT25G1528 Cannabis sativa HOM05D006547 ORTHO05D008112 9.3e-10 67.4 54 61.1
ATR0693G012 Amborella trichopoda HOM05D006547 ORTHO05D008112 1.2e-09 67.0 109 41.3
EL10As5g23562 Beta vulgaris HOM05D006547 ORTHO05D008112 1.6e-09 66.6 79 53.2
BolC4t21695H Brassica oleracea HOM05D006547 ORTHO05D008112 1.6e-09 66.6 96 41.7
BcaB02g08786 Brassica carinata HOM05D006547 ORTHO05D008112 2.1e-09 66.2 93 43.0
Prupe.3G008700 Prunus persica HOM05D006547 ORTHO05D008112 2.1e-09 66.2 97 43.3
Solyc06g009510.1 Solanum lycopersicum HOM05D006547 ORTHO05D008112 2.1e-09 66.2 96 46.9
Dinv10120 Davidia involucrata HOM05D006547 ORTHO05D008112 3.5e-09 65.5 81 45.7
Lsat_1_v5_gn_9_4661 Lactuca sativa HOM05D006547 ORTHO05D008112 3.5e-09 65.5 113 42.5
TPR.G8830 Trifolium pratense HOM05D006547 ORTHO05D008112 3.5e-09 65.5 111 44.1
Actinidia25863 Actinidia chinensis HOM05D006547 ORTHO05D008112 4.6e-09 65.1 124 41.9
Sopen06g004170 Solanum pennellii HOM05D006547 ORTHO05D008112 4.6e-09 65.1 97 46.4
C04p00620 Brassica napus HOM05D006547 ORTHO05D008112 6.1e-09 64.7 96 40.6
Carub.0004s3001 Capsella rubella HOM05D006547 ORTHO05D008112 6.1e-09 64.7 95 41.1
SalBow3G4324 Salvia bowleyana HOM05D006547 ORTHO05D008112 6.1e-09 64.7 85 48.2
Thhalv10001736m.g Eutrema salsugineum HOM05D006547 ORTHO05D008112 7.9e-09 64.3 96 41.7
Aa31LG1G28590 Aethionema arabicum HOM05D006547 ORTHO05D008112 1.0e-08 63.9 91 45.1
DCAR_012331 Daucus carota HOM05D006547 ORTHO05D008112 1.0e-08 63.9 81 43.2
Nn3g21744 Nelumbo nucifera HOM05D006547 ORTHO05D008112 1.3e-08 63.5 57 59.6
AL302U10010 Arabidopsis lyrata HOM05D006547 ORTHO05D008112 1.8e-08 63.2 96 39.6
AL4G46840 Arabidopsis lyrata HOM05D006547 ORTHO05D008112 1.8e-08 63.2 96 39.6
CARHR142670 Cardamine hirsuta HOM05D006547 ORTHO05D008112 1.8e-08 63.2 96 39.6
Ciclev10006764m.g Citrus clementina HOM05D006547 ORTHO05D008112 1.8e-08 63.2 64 54.7
Peaxi162Scf00058g00236 Petunia axillaris HOM05D006547 ORTHO05D008112 1.8e-08 63.2 60 60.0
CAN.G293.16 Capsicum annuum HOM05D006547 ORTHO05D008112 2.3e-08 62.8 121 41.3
MD17G1278000 Malus domestica HOM05D006547 ORTHO05D008112 2.3e-08 62.8 76 52.6
Nn4g25552 Nelumbo nucifera HOM05D006547 ORTHO05D008112 2.3e-08 62.8 122 41.8
PSO761G0312 Papaver somniferum HOM05D006547 ORTHO05D008112 2.3e-08 62.8 59 54.2
AT2G47270 Arabidopsis thaliana HOM05D006547 ORTHO05D008112 3.9e-08 62.0 96 38.5
BcaC01g05038 Brassica carinata HOM05D006547 ORTHO05D008112 3.9e-08 62.0 96 39.6
C03p30880 Brassica napus HOM05D006547 ORTHO05D008112 3.9e-08 62.0 96 39.6
BolC3t15440H Brassica oleracea HOM05D006547 ORTHO05D008112 3.9e-08 62.0 96 39.6
DCAR_005744 Daucus carota HOM05D006547 ORTHO05D008112 3.9e-08 62.0 83 47.0
Hma1.2p1_0408F.1_g146550 Hydrangea macrophylla HOM05D006547 ORTHO05D008112 3.9e-08 62.0 82 46.3
Sed0017392 Sechium edule HOM05D006547 ORTHO05D008112 3.9e-08 62.0 85 43.5
CsaV3_3G026610 Cucumis sativus L. HOM05D006547 ORTHO05D008112 5.1e-08 61.6 88 45.5
Rhsim13G0003400 Rhododendron simsii HOM05D006547 ORTHO05D008112 5.1e-08 61.6 121 40.5
MD09G1285300 Malus domestica HOM05D006547 ORTHO05D008112 6.7e-08 61.2 59 57.6
vmacro02389 Vaccinium macrocarpon HOM05D006547 ORTHO05D008112 6.7e-08 61.2 85 49.4
SGA_v2.0_scaffold334G49085 Striga asiatica HOM05D006547 ORTHO05D008112 8.7e-08 60.8 116 37.1
Migut.D00065 Erythranthe guttata HOM05D006547 ORTHO05D008112 1.1e-07 60.5 75 50.7
Oeu044737.1 Olea europaea HOM05D006547 ORTHO05D008112 1.1e-07 60.5 113 38.1
PGSC0003DMG400009058 Solanum tuberosum HOM05D006547 ORTHO05D008112 1.5e-07 60.1 124 37.1
SGA_v2.0_scaffold376G50290 Striga asiatica HOM05D006547 ORTHO05D008112 1.5e-07 60.1 86 45.3
DCAR_002885 Daucus carota HOM05D006547 ORTHO05D008112 2.5e-07 59.3 95 44.2
BcaB06g29454 Brassica carinata HOM05D006547 ORTHO05D008112 3.3e-07 58.9 97 39.2
BcaB01g03174 Brassica carinata HOM05D006547 ORTHO05D008112 4.3e-07 58.5 96 37.5
MELO3C012934.2 Cucumis melo HOM05D006547 ORTHO05D008112 4.3e-07 58.5 88 45.5
ClCG10G011560 Citrullus lanatus HOM05D006547 ORTHO05D008112 5.7e-07 58.2 71 47.9
Gohir.A04G137350 Gossypium hirsutum HOM05D034510 ORTHO05D008112 5.7e-07 58.2 88 38.6
Sopen01g031050 Solanum pennellii HOM05D006547 ORTHO05D008112 7.4e-07 57.8 124 37.1
MSTRG.21702 Avicennia marina HOM05D006547 ORTHO05D008112 9.7e-07 57.4 82 43.9
MBI19_g03260_MAGBIO Magnolia biondii HOM05D001624 ORTHO05D001530 9.7e-07 57.4 92 41.3
THA.LOC104817451 Tarenaya hassleriana HOM05D006547 ORTHO05D008112 1.6e-06 56.6 53 60.4
MBI18_g22340_MAGBIO Magnolia biondii HOM05D006547 ORTHO05D008112 2.8e-06 55.8 111 35.1
Sc05g0000320 Simmondsia chinensis HOM05D006547 ORTHO05D008112 2.8e-06 55.8 112 32.1
A04p34890 Brassica napus HOM05D006547 ORTHO05D008112 3.7e-06 55.5 93 38.7
BraSC79t46680Z Brassica rapa HOM05D006547 ORTHO05D008112 3.7e-06 55.5 93 38.7
Gohir.D04G180550 Gossypium hirsutum HOM05D034510 ORTHO05D047560 3.7e-06 55.5 88 38.6
Gorai.012G173700 Gossypium raimondii HOM05D034510 ORTHO05D047560 3.7e-06 55.5 88 38.6
Solyc01g079270.1 Solanum lycopersicum HOM05D006547 ORTHO05D008112 3.7e-06 55.5 120 38.3
Nitab4.5_0000222g0070 Nicotiana tabacum HOM05D006547 ORTHO05D008112 4.8e-06 55.1 90 42.2
PSO210G6541 Papaver somniferum HOM05D006547 ORTHO05D008112 4.8e-06 55.1 118 37.3
Sc17g0000340 Simmondsia chinensis HOM05D006547 ORTHO05D008112 6.3e-06 54.7 132 33.3


User provided reference genes

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