Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.08G086000 Carya illinoinensis HOM05D006913 ORTHO05D008720 4.1e-96 354.8 183 100.0
CiPaw.07G121500 Carya illinoinensis HOM05D006913 ORTHO05D008720 4.3e-77 291.6 190 80.5
Haze_05096 Corylus avellana HOM05D006913 ORTHO05D008720 4.0e-75 285.0 190 77.4
Cfa004859 Carpinus fangiana HOM05D006913 ORTHO05D008720 1.5e-74 283.1 190 76.3
QL12p018506 Quercus lobata HOM05D006913 ORTHO05D008720 1.2e-66 256.9 200 74.0
TWI59G1195 Tripterygium wilfordii HOM05D006913 ORTHO05D008720 1.2e-66 256.9 191 75.9
Thecc.01G320200 Theobroma cacao HOM05D006913 ORTHO05D008720 2.0e-66 256.1 192 75.0
CSS0007691 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 1.3e-65 253.4 189 71.4
FvH4_1g26590 Fragaria vesca HOM05D006913 ORTHO05D008720 2.9e-65 252.3 190 72.6
Prupe.3G005300 Prunus persica HOM05D006913 ORTHO05D008720 6.4e-65 251.1 191 72.8
CSS0013168 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 8.3e-65 250.8 189 71.4
FAN28G1862 Fragaria x ananassa HOM05D006913 ORTHO05D008720 4.1e-64 248.4 190 71.6
Duzib138G1774 Durio zibethinus HOM05D006913 ORTHO05D008720 9.2e-64 247.3 195 73.3
Dinv12109 Davidia involucrata HOM05D006913 ORTHO05D008720 1.6e-63 246.5 191 71.2
RcHm_v2.0_Chr3g0486731 Rosa chinensis HOM05D006913 ORTHO05D008720 7.8e-63 244.2 191 71.2
MD09G1287900 Malus domestica HOM05D006913 ORTHO05D008720 1.0e-62 243.8 190 70.0
GSVIVG01028181001 Vitis vinifera HOM05D006913 ORTHO05D008720 1.1e-61 240.4 190 68.4
Manes.01G231800 Manihot esculenta HOM05D006913 ORTHO05D008720 1.9e-61 239.6 191 70.2
TAR362G1022 Trochodendron aralioides HOM05D006913 ORTHO05D008720 2.5e-61 239.2 190 70.0
MD17G1280100 Malus domestica HOM05D006913 ORTHO05D008720 5.6e-61 238.0 190 68.9
Medtr7g109970 Medicago truncatula HOM05D006913 ORTHO05D008720 1.8e-59 233.0 190 67.9
Ciclev10022378m.g Citrus clementina HOM05D006913 ORTHO05D008720 3.1e-59 232.3 192 70.8
FAN19G0677 Fragaria x ananassa HOM05D006913 ORTHO05D008720 3.1e-59 232.3 222 62.2
Dinv33147 Davidia involucrata HOM05D006913 ORTHO05D008720 5.2e-59 231.5 187 69.0
Nn3g21840 Nelumbo nucifera HOM05D006913 ORTHO05D008720 1.5e-58 229.9 191 68.1
FAN26G0114 Fragaria x ananassa HOM05D006913 ORTHO05D008720 7.5e-58 227.6 222 61.3
Atru.chr5.924 Acer truncatum HOM05D006913 ORTHO05D008720 1.3e-57 226.9 191 70.7
Hma1.2p1_0408F.1_g146440 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 1.3e-57 226.9 195 68.2
Sed0008492 Sechium edule HOM05D006913 ORTHO05D008720 3.7e-57 225.3 189 68.8
Glyma.19G219300 Glycine max HOM05D006913 ORTHO05D008720 1.1e-56 223.8 190 65.3
Lj1g0024926 Lotus japonicus HOM05D006913 ORTHO05D008720 5.4e-56 221.5 188 67.6
Potri.002G191300 Populus trichocarpa HOM05D006913 ORTHO05D008720 7.1e-56 221.1 196 66.8
MBI18_g11536_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 2.1e-55 219.5 190 65.8
MBI18_g09652_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 4.6e-55 218.4 190 65.3
PGSC0003DMG400007277 Solanum tuberosum HOM05D006913 ORTHO05D008720 1.0e-54 217.2 182 67.6
Migut.D00043 Erythranthe guttata HOM05D006913 ORTHO05D008720 1.3e-54 216.9 179 66.5
Solyc06g009400.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 2.3e-54 216.1 169 70.4
PGR083G1650 Punica granatum HOM05D006913 ORTHO05D008720 3.0e-54 215.7 209 60.3
Sc05g0000220 Simmondsia chinensis HOM05D006913 ORTHO05D008720 3.0e-54 215.7 201 61.7
Sopen06g004130 Solanum pennellii HOM05D006913 ORTHO05D008720 3.9e-54 215.3 165 71.5
Cpa.g.c29544.2 Carica papaya HOM05D006913 ORTHO05D008720 6.6e-54 214.5 195 65.6
PSO170G2504 Papaver somniferum HOM05D006913 ORTHO05D008720 1.1e-53 213.8 147 74.8
VMungo1383G0882 Vigna mungo HOM05D006913 ORTHO05D008720 1.1e-53 213.8 190 63.7
Lalb_Chr04g0260061 Lupinus albus HOM05D006913 ORTHO05D008720 1.9e-53 213.0 193 63.2
PSO724G1078 Papaver somniferum HOM05D006913 ORTHO05D008720 1.9e-53 213.0 149 73.2
THA.LOC104801315 Tarenaya hassleriana HOM05D006913 ORTHO05D008720 1.9e-53 213.0 192 64.6
TPR.G4038 Trifolium pratense HOM05D006913 ORTHO05D008720 2.5e-53 212.6 148 75.7
Carub.0006s3531 Capsella rubella HOM05D006913 ORTHO05D008720 3.3e-53 212.2 190 64.7
Glyma.03G222100 Glycine max HOM05D006913 ORTHO05D008720 9.5e-53 210.7 209 59.8
Aqoxy5G02741 Aquilegia oxysepala HOM05D006913 ORTHO05D008720 1.2e-52 210.3 190 63.2
Nitab4.5_0003324g0110 Nicotiana tabacum HOM05D006913 ORTHO05D008720 2.8e-52 209.1 207 60.4
CAN.G1280.40 Capsicum annuum HOM05D006913 ORTHO05D008720 3.6e-52 208.8 153 73.9
A03p31400 Brassica napus HOM05D006913 ORTHO05D008720 6.2e-52 208.0 188 61.2
Nitab4.5_0000222g0190 Nicotiana tabacum HOM05D006913 ORTHO05D008720 6.2e-52 208.0 140 77.9
Psat3g018680 Pisum sativum HOM05D006913 ORTHO05D008720 6.2e-52 208.0 160 70.0
Aa31LG5G1440 Aethionema arabicum HOM05D006913 ORTHO05D008720 8.1e-52 207.6 189 61.9
MSTRG.21716 Avicennia marina HOM05D006913 ORTHO05D008720 8.1e-52 207.6 149 74.5
MELO3C023629.2 Cucumis melo HOM05D006913 ORTHO05D008720 8.1e-52 207.6 152 72.4
Rhsim01G0292800 Rhododendron simsii HOM05D006913 ORTHO05D008720 1.1e-51 207.2 202 61.4
ATR0693G068 Amborella trichopoda HOM05D006913 ORTHO05D008720 1.4e-51 206.8 134 79.1
AT4G01900 Arabidopsis thaliana HOM05D006913 ORTHO05D008720 1.4e-51 206.8 190 63.2
BcaB01g02398 Brassica carinata HOM05D006913 ORTHO05D008720 1.8e-51 206.5 188 60.6
Nitab4.5_0000363g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 1.8e-51 206.5 190 62.6
AL6G51370 Arabidopsis lyrata HOM05D006913 ORTHO05D008720 2.4e-51 206.1 190 62.6
CsaV3_7G030270 Cucumis sativus L. HOM05D006913 ORTHO05D008720 2.4e-51 206.1 152 71.7
BraA03t12321Z Brassica rapa HOM05D006913 ORTHO05D008720 4.0e-51 205.3 188 60.6
Sp6g01770 Schrenkiella parvula HOM05D006913 ORTHO05D008720 5.8e-50 201.4 191 61.8
arahy.Tifrunner.gnm1.ann1.6PPK8V Arachis hypogaea HOM05D006913 ORTHO05D008720 9.9e-50 200.7 148 73.6
DCAR_002917 Daucus carota HOM05D006913 ORTHO05D008720 1.3e-49 200.3 182 59.9
Thhalv10028983m.g Eutrema salsugineum HOM05D006913 ORTHO05D008720 1.3e-49 200.3 191 62.3
Sed0005932 Sechium edule HOM05D006913 ORTHO05D008720 1.3e-49 200.3 136 78.7
Sabra02G0164300 Salix brachista HOM05D006913 ORTHO05D008720 6.4e-49 198.0 228 54.8
ClCG09G004810 Citrullus lanatus HOM05D006913 ORTHO05D008720 1.1e-48 197.2 209 58.9
SalBow3G0392 Salvia bowleyana HOM05D006913 ORTHO05D008720 1.1e-48 197.2 139 74.1
BcaC01g06792 Brassica carinata HOM05D006913 ORTHO05D008720 2.4e-48 196.1 137 75.2
C03p38310 Brassica napus HOM05D006913 ORTHO05D008720 2.4e-48 196.1 137 75.2
BolC3t16112H Brassica oleracea HOM05D006913 ORTHO05D008720 2.4e-48 196.1 137 75.2
CDE11G0810 Ceratophyllum demersum HOM05D006913 ORTHO05D008720 4.1e-48 195.3 147 69.4
HPP92_002654 Vanilla planifolia HOM05D006913 ORTHO05D008720 3.5e-47 192.2 190 57.4
Cc01_g21970 Coffea canephora HOM05D006913 ORTHO05D008720 1.0e-46 190.7 137 73.7
BcaB01g02393 Brassica carinata HOM05D006913 ORTHO05D008720 8.7e-46 187.6 124 79.0
Peaxi162Scf00058g00218 Petunia axillaris HOM05D006913 ORTHO05D008720 3.3e-45 185.7 146 69.9
arahy.Tifrunner.gnm1.ann1.IRZ7G5 Arachis hypogaea HOM05D006913 ORTHO05D008720 5.6e-45 184.9 192 57.8
Os05g0133100 Oryza sativa ssp. japonica HOM05D006913 ORTHO05D008720 1.6e-44 183.3 124 76.6
unitig_578.g16634 Utricularia gibba HOM05D006913 ORTHO05D008720 5.2e-43 178.3 153 62.7
vmacro15097 Vaccinium macrocarpon HOM05D006913 ORTHO05D008720 1.5e-42 176.8 235 51.5
SGA_v2.0_scaffold80G25710 Striga asiatica HOM05D006913 ORTHO05D008720 5.8e-42 174.9 114 78.1
Eucgr.H00899 Eucalyptus grandis HOM05D006913 ORTHO05D008720 3.8e-41 172.2 188 58.0
Mapoly0061s0127 Marchantia polymorpha HOM05D006913 ORTHO05D008720 1.9e-40 169.9 124 70.2
Pp3c4_15530 Physcomitrium patens HOM05D006913 ORTHO05D008720 5.4e-40 168.3 127 69.3
FAN23G2363 Fragaria x ananassa HOM05D000049 ORTHO05D000027 2.3e-38 162.9 221 51.6
AUR62024592 Chenopodium quinoa HOM05D006913 ORTHO05D008720 2.8e-36 156.0 156 58.3
AagrBONN_evm.TU.Sc2ySwM_228.182 Anthoceros agrestis HOM05D006913 ORTHO05D008720 5.3e-35 151.8 115 68.7
COL.COLO4_23180 Corchorus olitorius HOM05D006913 ORTHO05D008720 1.5e-34 150.2 96 84.4
Solyc01g015000.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 3.8e-33 145.6 100 79.0
Lj1C13T3 Lonicera japonica HOM05D006913 ORTHO05D008720 1.4e-32 143.7 96 81.2
Oeu038057.1 Olea europaea HOM05D006913 ORTHO05D008720 2.4e-32 142.9 182 50.0
Ca_09230_v3 Cicer arietinum L. HOM05D006913 ORTHO05D008720 5.4e-32 141.7 96 78.1
Phvul.001G215500 Phaseolus vulgaris HOM05D006913 ORTHO05D008720 7.1e-32 141.4 142 57.7
SMO364G0946 Selaginella moellendorffii HOM05D006913 ORTHO05D008720 7.9e-31 137.9 95 75.8
SEGI_19322 Sequoiadendron giganteum HOM05D006913 ORTHO05D008720 3.0e-30 136.0 103 70.9
Hund09668 Selenicereus undatus HOM05D006913 ORTHO05D008720 6.7e-30 134.8 173 49.1
Duzib211G0548 Durio zibethinus HOM05D006913 ORTHO05D008720 5.8e-26 121.7 98 67.3
CARHR249910 Cardamine hirsuta HOM05D006913 ORTHO05D008720 6.4e-25 118.2 70 85.7
Cre07.g357350 Chlamydomonas reinhardtii HOM05D006913 ORTHO05D008720 6.4e-25 118.2 122 49.2
Eucgr.L01805 Eucalyptus grandis HOM05D006913 ORTHO05D008720 2.1e-23 113.2 139 51.1
MCO04G045 Micromonas commoda HOM05D006913 ORTHO05D008720 1.5e-21 107.1 127 50.4
Nitab4.5_0001013g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 2.1e-20 103.2 67 74.6
GSVIVG01010608001 Vitis vinifera HOM05D006913 ORTHO05D008720 3.7e-20 102.4 71 81.7
GSVIVG01037028001 Vitis vinifera HOM05D006913 ORTHO05D008720 3.7e-20 102.4 71 81.7
HPP92_027923 Vanilla planifolia HOM05D006913 ORTHO05D008720 9.0e-19 97.8 57 86.0
HPP92_027922 Vanilla planifolia HOM05D006913 ORTHO05D008720 4.6e-15 85.5 55 74.5
Hma1.2p1_3252F.1_g334540 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 1.0e-14 84.3 71 69.0
Haze_27360 Corylus avellana HOM05D006913 ORTHO05D008720 1.1e-11 74.3 109 34.9


User provided reference genes

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