Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.08G085000 Carya illinoinensis HOM05D008942 ORTHO05D009202 1.2e-77 293.1 149 100.0
CiPaw.07G122200 Carya illinoinensis HOM05D008942 ORTHO05D009202 1.6e-18 96.7 149 50.3
QL12p033984 Quercus lobata HOM05D008942 ORTHO05D009202 4.0e-17 92.0 148 44.6
CiPaw.07G122100 Carya illinoinensis HOM05D008942 ORTHO05D009202 3.5e-13 79.0 144 41.7
CiPaw.08G085100 Carya illinoinensis HOM05D008942 ORTHO05D009202 7.9e-13 77.8 149 43.0
Potri.014G115800 Populus trichocarpa HOM05D008942 ORTHO05D009202 2.3e-12 76.3 144 42.4
QL12p033964 Quercus lobata HOM05D008942 ORTHO05D009202 6.7e-12 74.7 144 41.7
Sabra02G0164800 Salix brachista HOM05D008942 ORTHO05D009202 8.7e-12 74.3 143 41.3
Cpa.g.sc1096.1 Carica papaya HOM05D008942 ORTHO05D009202 1.6e-10 70.1 150 38.0
Potri.002G190700 Populus trichocarpa HOM05D008942 ORTHO05D009202 6.2e-10 68.2 144 38.9
Duzib138G1053 Durio zibethinus HOM05D008942 ORTHO05D009202 8.1e-10 67.8 147 40.1
Thecc.01G321000 Theobroma cacao HOM05D008942 ORTHO05D009202 8.1e-10 67.8 145 42.1
Cfa004867 Carpinus fangiana HOM05D008942 ORTHO05D009202 1.4e-09 67.0 89 50.6
Sabra14G0085900 Salix brachista HOM05D008942 ORTHO05D009202 1.5e-08 63.5 144 38.9
Haze_05107 Corylus avellana HOM05D008942 ORTHO05D009202 4.5e-08 62.0 94 44.7
QL12p034826 Quercus lobata HOM05D008942 ORTHO05D009202 5.8e-08 61.6 144 39.6
Manes.01G232200 Manihot esculenta HOM05D008942 ORTHO05D009202 1.3e-07 60.5 145 31.7
Gohir.D11G112000 Gossypium hirsutum HOM05D008942 ORTHO05D009202 4.9e-07 58.5 147 37.4
Gorai.007G120200 Gossypium raimondii HOM05D008942 ORTHO05D009202 4.9e-07 58.5 147 36.7
Manes.01G232300 Manihot esculenta HOM05D008942 ORTHO05D009202 1.4e-06 57.0 145 30.3
Ciclev10013538m.g Citrus clementina HOM05D009264 ORTHO05D009202 3.2e-06 55.8 146 34.2
Gohir.A11G107000 Gossypium hirsutum HOM05D008942 ORTHO05D009202 5.5e-06 55.1 147 36.1
Lj5g0018092 Lotus japonicus HOM05D008942 ORTHO05D009202 7.1e-06 54.7 147 33.3


User provided reference genes

Program Settings