Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.08G083700 Carya illinoinensis HOM05D007572 ORTHO05D009535 3.6e-73 278.1 135 100.0
PGR142G3328 Punica granatum HOM05D007572 ORTHO05D009535 5.2e-56 221.1 135 77.8
Potri.002G188300 Populus trichocarpa HOM05D007572 ORTHO05D009535 8.9e-56 220.3 135 79.3
Manes.05G010100 Manihot esculenta HOM05D007572 ORTHO05D009535 1.3e-54 216.5 135 78.5
Duzib138G0176 Durio zibethinus HOM05D007572 ORTHO05D009535 7.0e-53 210.7 135 74.8
Medtr7g110410 Medicago truncatula HOM05D007572 ORTHO05D009535 1.6e-52 209.5 135 74.1
arahy.Tifrunner.gnm1.ann1.W6UB1T Arachis hypogaea HOM05D007572 ORTHO05D009535 7.8e-52 207.2 135 75.6
arahy.Tifrunner.gnm1.ann1.XSK3JW Arachis hypogaea HOM05D007572 ORTHO05D009535 1.3e-51 206.5 135 74.8
Gohir.A07G131300 Gossypium hirsutum HOM05D007572 ORTHO05D009535 2.3e-51 205.7 135 73.3
Dinv12090 Davidia involucrata HOM05D007572 ORTHO05D009535 3.0e-51 205.3 135 76.3
TWI23G0551 Tripterygium wilfordii HOM05D007572 ORTHO05D009535 3.0e-51 205.3 135 75.6
Psat3g018080 Pisum sativum HOM05D007572 ORTHO05D009535 3.9e-51 204.9 135 74.1
Nn3g21914 Nelumbo nucifera HOM05D007572 ORTHO05D009535 2.5e-50 202.2 135 71.9
Lalb_Chr04g0260171 Lupinus albus HOM05D007572 ORTHO05D009535 4.3e-50 201.4 135 71.9
Lj1g0010997 Lotus japonicus HOM05D007572 ORTHO05D009535 5.6e-50 201.1 135 72.6
Glyma.03G223300 Glycine max HOM05D007572 ORTHO05D009535 7.3e-50 200.7 136 72.8
Gohir.D07G135600 Gossypium hirsutum HOM05D007572 ORTHO05D009535 1.6e-49 199.5 135 71.1
TPR.G2442 Trifolium pratense HOM05D007572 ORTHO05D009535 1.6e-49 199.5 135 71.9
MELO3C034050.2 Cucumis melo HOM05D007572 ORTHO05D009535 6.2e-49 197.6 135 71.1
CsaV3_5G029750 Cucumis sativus L. HOM05D007572 ORTHO05D009535 6.2e-49 197.6 135 71.1
Eucgr.K00578 Eucalyptus grandis HOM05D007572 ORTHO05D009535 2.0e-47 192.6 135 68.1
Sed0017651 Sechium edule HOM05D007572 ORTHO05D009535 2.2e-46 189.1 135 68.9
Sopen06g004090 Solanum pennellii HOM05D007572 ORTHO05D009535 2.2e-46 189.1 135 70.4
Phvul.001G217100 Phaseolus vulgaris HOM05D007572 ORTHO05D009535 2.9e-46 188.7 135 71.9
CAN.G1280.44 Capsicum annuum HOM05D007572 ORTHO05D009535 7.1e-45 184.1 138 68.1
Solyc06g009340.4 Solanum lycopersicum HOM05D007572 ORTHO05D009535 9.2e-45 183.7 135 68.1
HanXRQChr13g0414461 Helianthus annuus HOM05D007572 ORTHO05D009535 1.3e-43 179.9 135 65.9
Lsat_1_v5_gn_8_167180 Lactuca sativa HOM05D007572 ORTHO05D009535 3.9e-43 178.3 135 64.4
Nitab4.5_0003324g0080 Nicotiana tabacum HOM05D007572 ORTHO05D009535 4.3e-42 174.9 139 65.5
Sp5g01190 Schrenkiella parvula HOM05D007572 ORTHO05D009535 4.3e-42 174.9 139 66.9
BolC8t51291H Brassica oleracea HOM05D007572 ORTHO05D009535 9.5e-42 173.7 139 66.9
BraA09t40838Z Brassica rapa HOM05D007572 ORTHO05D009535 1.2e-41 173.3 139 66.2
C08p37130 Brassica napus HOM05D007572 ORTHO05D009535 1.6e-41 172.9 139 66.9
Thhalv10006305m.g Eutrema salsugineum HOM05D007572 ORTHO05D009535 2.1e-41 172.6 139 66.9
Aqoxy2G02521 Aquilegia oxysepala HOM05D007572 ORTHO05D009535 2.8e-41 172.2 135 67.4
Hund11629 Selenicereus undatus HOM05D007572 ORTHO05D009535 2.8e-41 172.2 135 63.0
AT3G62190 Arabidopsis thaliana HOM05D007572 ORTHO05D009535 8.9e-40 167.2 139 64.7
Carub.0005s2892 Capsella rubella HOM05D007572 ORTHO05D009535 1.5e-39 166.4 139 65.5
AL5G44940 Arabidopsis lyrata HOM05D007572 ORTHO05D009535 2.6e-39 165.6 139 64.0
Oeu052583.1 Olea europaea HOM05D007572 ORTHO05D009535 2.6e-39 165.6 135 63.0
vmacro16962 Vaccinium macrocarpon HOM05D007572 ORTHO05D009535 5.8e-39 164.5 117 70.1
Nitab4.5_0000363g0140 Nicotiana tabacum HOM05D007572 ORTHO05D009535 2.2e-38 162.5 114 70.2
PGSC0003DMG400007276 Solanum tuberosum HOM05D007572 ORTHO05D009535 1.4e-37 159.8 114 69.3
Cc01_g21830 Coffea canephora HOM05D007572 ORTHO05D009535 4.1e-37 158.3 135 57.0
CDE02G1692 Ceratophyllum demersum HOM05D007572 ORTHO05D009535 1.2e-36 156.8 135 57.0
ATR0796G039 Amborella trichopoda HOM05D007572 ORTHO05D009535 3.5e-36 155.2 130 61.5
PSO210G6566 Papaver somniferum HOM05D007572 ORTHO05D009535 2.3e-35 152.5 145 55.9
VMungo1383G1880 Vigna mungo HOM05D007572 ORTHO05D009535 2.5e-34 149.1 125 64.0
A09p54260 Brassica napus HOM05D007572 ORTHO05D009535 2.1e-33 146.0 125 64.8
Ah.11g045850 Amaranthus hybridus HOM05D007572 ORTHO05D009535 4.7e-33 144.8 114 64.0
Rhsim01G0293200 Rhododendron simsii HOM05D007572 ORTHO05D009535 1.8e-32 142.9 191 49.2
Aa31LG10G16130 Aethionema arabicum HOM05D007572 ORTHO05D009535 2.0e-31 139.4 186 47.3
Zm00001eb110000 Zea mays HOM05D007572 ORTHO05D009535 4.2e-29 131.7 135 53.3
SalBow6G4072 Salvia bowleyana HOM05D007572 ORTHO05D009535 5.4e-29 131.3 135 50.4
Peaxi162Scf00058g02018 Petunia axillaris HOM05D007572 ORTHO05D009535 1.2e-28 130.2 113 58.4
Cfa004892 Carpinus fangiana HOM05D007572 ORTHO05D009535 6.0e-28 127.9 74 82.4
BcaC07g40711 Brassica carinata HOM05D007572 ORTHO05D009535 1.9e-26 122.9 115 58.3
Migut.D00021 Erythranthe guttata HOM05D007572 ORTHO05D009535 1.9e-26 122.9 147 49.7
QL12p034502 Quercus lobata HOM05D007572 ORTHO05D009535 4.3e-26 121.7 72 81.9
unitig_60.g25647 Utricularia gibba HOM05D007572 ORTHO05D009535 4.3e-26 121.7 138 52.2
Haze_05130 Corylus avellana HOM05D007572 ORTHO05D009535 1.3e-25 120.2 64 87.5
Thecc.01G323600 Theobroma cacao HOM05D007572 ORTHO05D009535 6.9e-24 114.4 75 72.0
Thecc.01G323700 Theobroma cacao HOM05D000023 ORTHO05D000014 2.9e-22 109.0 64 79.7
Pp3c17_19540 Physcomitrium patens HOM05D007572 ORTHO05D009535 6.4e-22 107.8 139 46.0
SGA_v2.0_scaffold80G25682 Striga asiatica HOM05D007572 ORTHO05D009535 8.4e-22 107.5 172 39.0
Sabra02G0167000 Salix brachista HOM05D007572 ORTHO05D009535 1.4e-21 106.7 64 78.1
Duzib133G1540 Durio zibethinus HOM05D007572 ORTHO05D009535 1.9e-21 106.3 64 78.1
Gorai.001G147700 Gossypium raimondii HOM05D007572 ORTHO05D009535 5.4e-21 104.8 64 75.0
Gorai.001G147500 Gossypium raimondii HOM05D007572 ORTHO05D009535 1.0e-19 100.5 85 61.2
AUR62011699 Chenopodium quinoa HOM05D007572 ORTHO05D009535 3.9e-19 98.6 64 70.3
DCAR_002931 Daucus carota HOM05D007572 ORTHO05D009535 5.1e-19 98.2 72 63.9
GSVIVG01028267001 Vitis vinifera HOM05D007572 ORTHO05D009535 5.1e-19 98.2 73 61.6
Sc05g0000110 Simmondsia chinensis HOM05D007572 ORTHO05D009535 6.7e-19 97.8 64 70.3
GSVIVG01028266001 Vitis vinifera HOM05D007572 ORTHO05D009535 1.9e-18 96.3 64 71.9
AagrBONN_evm.TU.Sc2ySwM_228.110 Anthoceros agrestis HOM05D007572 ORTHO05D009535 1.3e-17 93.6 143 39.2
COL.COLO4_23146 Corchorus olitorius HOM05D000023 ORTHO05D000014 1.6e-17 93.2 53 81.1
MBI18_g10389_MAGBIO Magnolia biondii HOM05D007572 ORTHO05D009535 2.8e-17 92.4 73 61.6
Atru.chr5.887 Acer truncatum HOM05D007572 ORTHO05D009535 6.2e-17 91.3 54 74.1
Ciclev10024492m.g Citrus clementina HOM05D007572 ORTHO05D009535 6.2e-17 91.3 50 84.0
PSO761G0106 Papaver somniferum HOM05D007572 ORTHO05D009535 1.8e-16 89.7 72 65.3
Sabra02G0166900 Salix brachista HOM05D000023 ORTHO05D000014 2.4e-16 89.4 51 80.4
CBR_g88332 Chara braunii HOM05D007572 ORTHO05D009535 9.0e-16 87.4 161 32.9
CANSAT01G2141 Cannabis sativa HOM05D007572 ORTHO05D009535 1.2e-15 87.0 66 66.7
CARHR172530 Cardamine hirsuta HOM05D007572 ORTHO05D009535 3.4e-15 85.5 67 62.7
Ciclev10023453m.g Citrus clementina HOM05D007572 ORTHO05D009535 4.5e-15 85.1 53 73.6
ClCG11G013240 Citrullus lanatus HOM05D007572 ORTHO05D009535 5.8e-15 84.7 59 67.8
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 1.7e-14 83.2 71 57.7
BcaB07g33721 Brassica carinata HOM05D007572 ORTHO05D009535 8.4e-14 80.9 65 61.5
SEGI_13004 Sequoiadendron giganteum HOM05D007572 ORTHO05D009535 1.4e-13 80.1 77 53.2
TAR636G1955 Trochodendron aralioides HOM05D007572 ORTHO05D009535 1.9e-13 79.7 56 66.1
Atru.chr5.884 Acer truncatum HOM05D007572 ORTHO05D009535 4.2e-13 78.6 46 76.1
Atru.chr5.886 Acer truncatum HOM05D007572 ORTHO05D009535 9.3e-13 77.4 57 68.4
Atru.chr5.889 Acer truncatum HOM05D007572 ORTHO05D009535 9.3e-13 77.4 57 68.4
Glyma.19G220500 Glycine max HOM05D007572 ORTHO05D009535 1.0e-11 73.9 142 37.3
Gohir.A12G120600 Gossypium hirsutum HOM05D007572 ORTHO05D009535 1.6e-09 66.6 55 61.8
TAR365G0305 Trochodendron aralioides HOM05D007572 ORTHO05D009535 6.2e-09 64.7 56 58.9
MBI18_g10388_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 1.1e-08 63.9 53 60.4
Os07g0637100 Oryza sativa ssp. japonica HOM05D007572 ORTHO05D009535 2.4e-08 62.8 54 55.6
AagrBONN_evm.TU.Sc2ySwM_362.2777 Anthoceros agrestis HOM05D007572 ORTHO05D009535 2.2e-06 56.2 66 43.9
Os07g0637150 Oryza sativa ssp. japonica HOM05D007572 ORTHO05D009535 2.2e-06 56.2 55 50.9
CAN.G151.20 Capsicum annuum HOM05D000329 ORTHO05D000833 8.4e-06 54.3 51 60.8


User provided reference genes

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