Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 1.0e-108 396.7 201 100.0
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 2.2e-79 299.3 197 79.2
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 1.0e-76 290.4 197 77.7
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 1.5e-70 270.0 201 70.6
CiPaw.07G125600 Carya illinoinensis HOM05D006977 ORTHO05D008738 2.8e-61 239.2 195 68.7
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 1.7e-58 229.9 191 62.3
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 4.9e-58 228.4 195 62.6
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 7.0e-57 224.6 197 62.4
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 1.3e-55 220.3 201 58.7
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 3.8e-55 218.8 174 64.9
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 1.6e-53 213.4 161 65.8
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 6.1e-53 211.5 183 62.3
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 8.9e-52 207.6 177 63.3
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 2.0e-51 206.5 187 59.9
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 3.4e-51 205.7 179 60.9
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 7.5e-51 204.5 177 61.6
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 7.5e-51 204.5 172 64.5
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 6.4e-50 201.4 182 61.5
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 1.4e-49 200.3 177 62.7
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 1.4e-49 200.3 198 56.6
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 1.4e-49 200.3 202 55.9
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 4.1e-49 198.7 182 61.0
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 5.4e-49 198.4 181 62.4
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 5.4e-49 198.4 183 62.3
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 9.2e-49 197.6 195 60.0
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 1.2e-48 197.2 182 59.9
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 2.7e-48 196.1 196 56.6
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 3.5e-48 195.7 181 59.7
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 3.5e-48 195.7 181 59.7
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 1.3e-47 193.7 181 59.1
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 1.7e-47 193.4 181 59.1
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 1.7e-47 193.4 183 59.6
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 3.9e-47 192.2 181 60.2
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 1.9e-46 189.9 167 60.5
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 1.9e-46 189.9 164 60.4
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 2.5e-46 189.5 200 52.5
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 3.3e-46 189.1 181 56.9
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 5.6e-46 188.3 176 58.0
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 1.2e-45 187.2 172 58.7
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 2.1e-45 186.4 210 52.9
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 4.7e-45 185.3 184 56.0
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 4.7e-45 185.3 189 57.1
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 4.7e-45 185.3 152 63.8
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 6.2e-45 184.9 189 57.1
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 6.2e-45 184.9 175 58.3
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 2.3e-44 183.0 185 55.7
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 6.8e-44 181.4 173 57.8
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 1.5e-43 180.3 180 57.8
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 2.0e-43 179.9 151 62.3
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 2.6e-43 179.5 159 61.0
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 3.4e-43 179.1 189 55.0
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 4.4e-43 178.7 184 57.1
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 9.8e-43 177.6 172 55.2
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 6.4e-42 174.9 173 56.1
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 8.3e-42 174.5 161 59.0
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 1.1e-41 174.1 181 55.2
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 5.4e-41 171.8 177 53.7
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 9.2e-41 171.0 172 54.7
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 1.2e-40 170.6 147 61.2
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 1.3e-39 167.2 175 50.3
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 1.7e-39 166.8 144 60.4
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 1.7e-39 166.8 177 54.2
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 3.9e-39 165.6 175 52.0
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 5.1e-39 165.2 165 54.5
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 5.1e-39 165.2 150 60.7
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 1.5e-38 163.7 162 54.9
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 1.9e-38 163.3 180 49.4
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 3.3e-38 162.5 168 54.2
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 7.3e-38 161.4 153 60.1
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 9.5e-38 161.0 155 57.4
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 1.2e-37 160.6 165 52.7
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 2.1e-37 159.8 174 53.4
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 2.8e-37 159.5 153 55.6
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 4.7e-37 158.7 142 59.9
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 8.1e-37 157.9 153 58.8
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 1.1e-36 157.5 198 47.0
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 3.1e-36 156.0 155 53.5
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 3.1e-36 156.0 133 62.4
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 8.9e-36 154.5 165 50.9
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 1.2e-35 154.1 184 46.2
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 2.6e-35 152.9 160 51.9
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 2.6e-35 152.9 160 51.9
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 2.6e-35 152.9 174 53.4
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 5.8e-35 151.8 159 49.7
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 5.8e-35 151.8 162 49.4
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 7.5e-35 151.4 181 48.6
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 1.3e-34 150.6 154 51.3
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 1.3e-34 150.6 154 51.3
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 1.3e-34 150.6 184 47.3
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 2.2e-34 149.8 166 49.4
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 4.9e-34 148.7 117 63.2
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 1.1e-33 147.5 180 46.1
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 5.4e-33 145.2 128 60.2
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 1.2e-32 144.1 154 49.4
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 1.2e-32 144.1 154 49.4
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 1.2e-32 144.1 182 50.0
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 2.1e-32 143.3 156 51.9
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 7.8e-32 141.4 126 59.5
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 3.9e-31 139.0 149 56.4
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 6.6e-31 138.3 157 48.4
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 2.8e-29 132.9 168 47.6
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 6.2e-29 131.7 149 53.7
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 5.8e-27 125.2 180 40.6
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 8.4e-26 121.3 115 58.3
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 1.2e-24 117.5 114 52.6
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 1.3e-23 114.0 115 52.2
MD17G1285100 Malus domestica HOM05D006977 ORTHO05D008738 8.7e-23 111.3 76 69.7
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 1.2e-19 100.9 85 56.5
Duzib138G1646 Durio zibethinus HOM05D006977 ORTHO05D008738 9.0e-12 74.7 90 50.0
Mapoly0147s0029 Marchantia polymorpha HOM05D006977 ORTHO05D008738 1.7e-10 70.5 175 33.1
CDE04G2744 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 6.4e-10 68.6 79 51.9
Pp3c20_22530 Physcomitrium patens HOM05D006977 ORTHO05D008738 8.4e-10 68.2 136 36.8
TWI81G0948 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 1.9e-06 57.0 42 64.3


User provided reference genes

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