Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.08G070700 Carya illinoinensis HOM05D005792 ORTHO05D007171 1.9e-178 629.0 309 100.0
CiPaw.08G070500 Carya illinoinensis HOM05D005792 ORTHO05D007171 8.3e-174 613.6 309 97.1
QL02p013536 Quercus lobata HOM05D005792 ORTHO05D007171 3.2e-149 531.9 315 81.6
Manes.18G007700 Manihot esculenta HOM05D005792 ORTHO05D007171 7.3e-146 520.8 309 79.0
Prupe.1G357300 Prunus persica HOM05D005792 ORTHO05D007171 9.5e-146 520.4 308 79.5
Atru.chr13.181 Acer truncatum HOM05D005792 ORTHO05D007171 1.5e-143 513.1 310 79.4
Potri.005G247600 Populus trichocarpa HOM05D005792 ORTHO05D007171 3.4e-143 511.9 310 77.7
Dinv39569 Davidia involucrata HOM05D005792 ORTHO05D007171 1.3e-142 510.0 309 76.7
VMungo1309G0997 Vigna mungo HOM05D005792 ORTHO05D007171 7.1e-141 504.2 309 77.0
Eucgr.F01710 Eucalyptus grandis HOM05D005792 ORTHO05D007171 9.2e-141 503.8 305 76.4
GSVIVG01008709001 Vitis vinifera HOM05D005792 ORTHO05D007171 1.2e-140 503.4 309 75.4
Glyma.06G019900 Glycine max HOM05D005792 ORTHO05D007171 7.8e-140 500.7 309 77.0
Cfa014030 Carpinus fangiana HOM05D000201 ORTHO05D004673 2.3e-139 499.2 281 85.1
Thecc.08G054700 Theobroma cacao HOM05D005792 ORTHO05D007171 6.6e-139 497.7 309 75.7
Ciclev10001939m.g Citrus clementina HOM05D005792 ORTHO05D007171 1.1e-138 496.9 310 76.5
Lalb_Chr23g0265871 Lupinus albus HOM05D005792 ORTHO05D007171 1.5e-138 496.5 309 74.4
TWI36G1625 Tripterygium wilfordii HOM05D005792 ORTHO05D007171 1.9e-138 496.1 309 74.8
Ca_15448_v3 Cicer arietinum L. HOM05D005792 ORTHO05D007171 7.3e-138 494.2 309 75.7
MD08G1005200 Malus domestica HOM05D005792 ORTHO05D007171 1.2e-137 493.4 306 76.5
Glyma.04G019600 Glycine max HOM05D005792 ORTHO05D007171 3.6e-137 491.9 315 75.6
Duzib093G0813 Durio zibethinus HOM05D005792 ORTHO05D007171 6.2e-137 491.1 309 73.1
Lj1g0011663 Lotus japonicus HOM05D005792 ORTHO05D007171 1.1e-136 490.3 309 75.1
Medtr3g115040 Medicago truncatula HOM05D005792 ORTHO05D007171 1.1e-136 490.3 309 75.7
Psat5g010960 Pisum sativum HOM05D005792 ORTHO05D007171 8.9e-136 487.3 309 75.4
THA.LOC104813765 Tarenaya hassleriana HOM05D005792 ORTHO05D007171 1.2e-135 486.9 305 75.4
Gohir.D05G256800 Gossypium hirsutum HOM05D005792 ORTHO05D007171 2.0e-135 486.1 309 73.8
Gorai.009G268300 Gossypium raimondii HOM05D005792 ORTHO05D007171 2.6e-135 485.7 309 73.8
Manes.05G141100 Manihot esculenta HOM05D005792 ORTHO05D007171 2.6e-135 485.7 307 74.9
Nitab4.5_0000498g0200 Nicotiana tabacum HOM05D005792 ORTHO05D007171 2.6e-135 485.7 306 74.8
Haze_22736 Corylus avellana HOM05D005792 ORTHO05D007171 3.4e-135 485.3 346 70.5
RcHm_v2.0_Chr6g0303911 Rosa chinensis HOM05D005792 ORTHO05D007171 1.7e-134 483.0 306 75.2
FvH4_2g37800 Fragaria vesca HOM05D005792 ORTHO05D007171 2.2e-134 482.6 306 74.8
Atru.chr13.183 Acer truncatum HOM05D005792 ORTHO05D007171 3.7e-134 481.9 306 73.9
CANSAT51G0003 Cannabis sativa HOM05D005792 ORTHO05D007171 4.9e-134 481.5 307 74.6
CsaV3_2G024540 Cucumis sativus L. HOM05D005792 ORTHO05D007171 8.3e-134 480.7 310 72.9
Nitab4.5_0002353g0010 Nicotiana tabacum HOM05D005792 ORTHO05D007171 1.1e-133 480.3 303 73.9
PGR083G0297 Punica granatum HOM05D005792 ORTHO05D007171 4.1e-133 478.4 309 72.8
CSS0018708 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 3.5e-132 475.3 310 71.3
Sed0026749 Sechium edule HOM05D005792 ORTHO05D007171 3.5e-132 475.3 305 72.1
CSS0011850 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 7.8e-132 474.2 310 71.0
Sed0027939 Sechium edule HOM05D005792 ORTHO05D007171 7.8e-132 474.2 305 71.5
Migut.C00916 Erythranthe guttata HOM05D005792 ORTHO05D007171 3.9e-131 471.9 309 71.5
MELO3C011330.2 Cucumis melo HOM05D005792 ORTHO05D007171 5.1e-131 471.5 319 70.2
CAN.G401.3 Capsicum annuum HOM05D005792 ORTHO05D007171 8.6e-131 470.7 306 73.5
CSS0016825 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 2.5e-130 469.2 315 70.2
BcaC08g47286 Brassica carinata HOM05D005792 ORTHO05D007171 4.3e-130 468.4 308 72.4
Thhalv10018917m.g Eutrema salsugineum HOM05D005792 ORTHO05D007171 4.3e-130 468.4 305 72.8
arahy.Tifrunner.gnm1.ann1.NZM2IS Arachis hypogaea HOM05D005792 ORTHO05D007171 2.8e-129 465.7 340 66.8
Hma1.2p1_1260F.1_g270990 Hydrangea macrophylla HOM05D005792 ORTHO05D007171 2.8e-129 465.7 309 71.8
Atru.chr1.2256 Acer truncatum HOM05D005792 ORTHO05D007171 4.7e-129 464.9 307 72.0
AL2G36210 Arabidopsis lyrata HOM05D005792 ORTHO05D007171 1.4e-128 463.4 305 71.5
AT1G76150 Arabidopsis thaliana HOM05D005792 ORTHO05D007171 1.8e-128 463.0 305 71.5
AUR62013837 Chenopodium quinoa HOM05D005792 ORTHO05D007171 1.8e-128 463.0 302 69.9
Peaxi162Scf00064g00910 Petunia axillaris HOM05D005792 ORTHO05D007171 2.4e-128 462.6 308 72.1
Sp5g31280 Schrenkiella parvula HOM05D005792 ORTHO05D007171 4.0e-128 461.8 306 72.2
Hund05134 Selenicereus undatus HOM05D005792 ORTHO05D007171 6.8e-128 461.1 308 68.8
EL10Ac1g02028 Beta vulgaris HOM05D005792 ORTHO05D007171 1.5e-127 459.9 307 68.4
Sc26g0004560 Simmondsia chinensis HOM05D005792 ORTHO05D007171 2.0e-127 459.5 302 70.5
Carub.0002s2304 Capsella rubella HOM05D005792 ORTHO05D007171 2.6e-127 459.1 305 70.5
Solyc12g094450.3 Solanum lycopersicum HOM05D005792 ORTHO05D007171 4.4e-127 458.4 306 69.6
Sopen12g031340 Solanum pennellii HOM05D005792 ORTHO05D007171 5.8e-127 458.0 306 69.6
Lj4C15T2 Lonicera japonica HOM05D005792 ORTHO05D007171 7.6e-127 457.6 309 71.2
Nn5g30890 Nelumbo nucifera HOM05D005792 ORTHO05D007171 7.6e-127 457.6 310 69.4
Aqoxy6G01867 Aquilegia oxysepala HOM05D005792 ORTHO05D007171 1.3e-126 456.8 306 69.6
Duzib116G0262 Durio zibethinus HOM05D005792 ORTHO05D007171 2.9e-126 455.7 280 75.0
vmacro21840 Vaccinium macrocarpon HOM05D005792 ORTHO05D007171 6.4e-126 454.5 340 64.4
CARHR069700 Cardamine hirsuta HOM05D005792 ORTHO05D007171 4.2e-125 451.8 308 70.1
Cc10_g00990 Coffea canephora HOM05D005792 ORTHO05D007171 4.2e-125 451.8 315 68.6
HanXRQChr14g0429001 Helianthus annuus HOM05D005792 ORTHO05D007171 2.7e-124 449.1 307 68.1
PGSC0003DMG400029326 Solanum tuberosum HOM05D005792 ORTHO05D007171 2.7e-124 449.1 335 64.8
Rhsim06G0009800 Rhododendron simsii HOM05D005792 ORTHO05D007171 1.3e-123 446.8 306 70.6
C06p50100 Brassica napus HOM05D005792 ORTHO05D007171 2.3e-123 446.0 308 70.1
BraA07t31701Z Brassica rapa HOM05D005792 ORTHO05D007171 3.0e-123 445.7 305 70.2
A07p41720 Brassica napus HOM05D005792 ORTHO05D007171 3.9e-123 445.3 305 70.5
unitig_747.g21523 Utricularia gibba HOM05D005792 ORTHO05D007171 3.9e-123 445.3 307 66.8
Gohir.A05G255200 Gossypium hirsutum HOM05D005792 ORTHO05D007171 1.9e-122 443.0 314 67.8
BcaNung05119 Brassica carinata HOM05D005792 ORTHO05D007171 3.3e-122 442.2 308 68.8
PSO541G2987 Papaver somniferum HOM05D005792 ORTHO05D007171 7.3e-122 441.0 302 66.6
SalBow7G0964 Salvia bowleyana HOM05D005792 ORTHO05D007171 9.6e-122 440.7 311 66.9
ECA238G1749 Erigeron canadensis HOM05D005792 ORTHO05D007171 8.1e-121 437.6 299 68.2
Aa31LG4G6270 Aethionema arabicum HOM05D005792 ORTHO05D007171 7.6e-119 431.0 310 67.7
Actinidia15473 Actinidia chinensis HOM05D005792 ORTHO05D007171 8.4e-118 427.6 329 63.2
Lsat_1_v5_gn_2_5940 Lactuca sativa HOM05D005792 ORTHO05D007171 1.1e-117 427.2 307 65.5
FAN27G1567 Fragaria x ananassa HOM05D000201 ORTHO05D004673 6.6e-115 417.9 282 72.3
BolC6t40050H Brassica oleracea HOM05D005792 ORTHO05D007171 8.7e-115 417.5 355 60.3
TAR625G0413 Trochodendron aralioides HOM05D005792 ORTHO05D007171 9.6e-114 414.1 285 71.6
MBI08_g05391_MAGBIO Magnolia biondii HOM05D005792 ORTHO05D007171 2.8e-113 412.5 283 69.6
FAN15G3656 Fragaria x ananassa HOM05D000201 ORTHO05D004673 6.2e-113 411.4 282 70.9
ClCG08G013930 Citrullus lanatus HOM05D005792 ORTHO05D007171 2.4e-112 409.5 350 59.4
Os09g0544900 Oryza sativa ssp. japonica HOM05D005792 ORTHO05D007171 3.1e-112 409.1 304 63.8
SGA_v2.0_scaffold351G49656 Striga asiatica HOM05D005792 ORTHO05D007171 9.0e-112 407.5 309 64.4
DCAR_016749 Daucus carota HOM05D005792 ORTHO05D007171 2.6e-111 406.0 369 55.0
Haze_22722 Corylus avellana HOM05D005792 ORTHO05D007171 1.7e-102 376.7 282 68.4
Nitab4.5_0000588g0300 Nicotiana tabacum HOM05D005792 ORTHO05D007171 3.5e-100 369.0 308 60.4
DCAR_013899 Daucus carota HOM05D005792 ORTHO05D007171 3.0e-99 365.9 309 58.6
Ah.11g040640 Amaranthus hybridus HOM05D005792 ORTHO05D007171 1.5e-98 363.6 302 58.3
BcaC08g47109 Brassica carinata HOM05D005792 ORTHO05D007171 5.7e-98 361.7 297 60.3
PSO675G2870 Papaver somniferum HOM05D005792 ORTHO05D007171 1.1e-96 357.5 302 58.3
Phvul.009G020900 Phaseolus vulgaris HOM05D005792 ORTHO05D007171 1.1e-96 357.5 222 74.8
COL.COLO4_26053 Corchorus olitorius HOM05D005792 ORTHO05D007171 3.1e-96 355.9 314 58.0
SHI08027 Sapria himalayana HOM05D005792 ORTHO05D007171 1.5e-95 353.6 276 60.1
Pp3c4_24330 Physcomitrium patens HOM05D005792 ORTHO05D007171 4.2e-93 345.5 320 54.4
Gohir.D02G118150 Gossypium hirsutum HOM05D005792 ORTHO05D007171 1.1e-90 337.4 224 70.1
AUR62036768 Chenopodium quinoa HOM05D005792 ORTHO05D007171 1.1e-88 330.9 283 58.0
SMO174G0111 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 1.9e-85 320.1 299 52.2
Zm00001eb104070 Zea mays HOM05D005792 ORTHO05D007171 4.6e-84 315.5 237 63.7
arahy.Tifrunner.gnm1.ann1.CIDL5D Arachis hypogaea HOM05D005792 ORTHO05D007171 1.5e-79 300.4 201 70.1
Oeu021471.1 Olea europaea HOM05D005792 ORTHO05D007171 4.2e-77 292.4 198 69.2
Mapoly0135s0031 Marchantia polymorpha HOM05D005792 ORTHO05D007171 3.9e-75 285.8 314 48.4
MSTRG.25290 Avicennia marina HOM05D005792 ORTHO05D007171 2.6e-74 283.1 199 64.8
SEGI_22358 Sequoiadendron giganteum HOM05D005792 ORTHO05D007171 2.4e-72 276.6 200 69.0
ATR0661G150 Amborella trichopoda HOM05D005792 ORTHO05D007171 1.0e-70 271.2 192 70.8
TAR625G0324 Trochodendron aralioides HOM05D005792 ORTHO05D007171 5.0e-70 268.9 167 77.2
Sabra02G0010800 Salix brachista HOM05D005792 ORTHO05D007171 1.1e-66 257.7 236 57.6
Zm00001eb321160 Zea mays HOM05D005792 ORTHO05D007171 6.3e-65 251.9 217 56.7
TPR.G38109 Trifolium pratense HOM05D005792 ORTHO05D007171 1.8e-56 223.8 309 42.1
AagrBONN_evm.TU.Sc2ySwM_117.3246 Anthoceros agrestis HOM05D005792 ORTHO05D007171 4.5e-55 219.2 206 53.9
CBR_g50912 Chara braunii HOM05D005792 ORTHO05D007171 4.5e-55 219.2 396 36.6
TPR.G753 Trifolium pratense HOM05D005792 ORTHO05D007171 1.7e-54 217.2 137 77.4
Actinidia17028 Actinidia chinensis HOM05D005792 ORTHO05D007171 1.9e-53 213.8 169 61.5
CDE05G1591 Ceratophyllum demersum HOM05D005792 ORTHO05D007171 2.2e-49 200.3 153 58.8
CSS0030340 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 1.2e-42 177.9 131 66.4
Haze_26844 Corylus avellana HOM05D005792 ORTHO05D007171 2.7e-39 166.8 296 35.1
TAR625G0970 Trochodendron aralioides HOM05D005792 ORTHO05D007171 3.5e-39 166.4 111 66.7
Cre06.g308100 Chlamydomonas reinhardtii HOM05D005792 ORTHO05D007171 5.6e-37 159.1 309 35.6
HPP92_014386 Vanilla planifolia HOM05D005792 ORTHO05D007171 2.4e-32 143.7 113 58.4
Hund05135 Selenicereus undatus HOM05D005792 ORTHO05D007171 2.3e-30 137.1 271 31.4
SalBow6G2635 Salvia bowleyana HOM05D005792 ORTHO05D007171 3.6e-28 129.8 83 71.1
CBR_g22029 Chara braunii HOM05D005792 ORTHO05D007171 1.9e-24 117.5 87 58.6
SMO174G0016 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 2.2e-17 94.0 79 59.5
Sabra02G0010700 Salix brachista HOM05D000201 ORTHO05D000490 6.0e-15 85.9 63 58.7
ATR0661G053 Amborella trichopoda HOM05D005792 ORTHO05D007171 6.6e-14 82.4 53 71.7
COL.COLO4_12452 Corchorus olitorius HOM05D005792 ORTHO05D007171 2.5e-13 80.5 74 54.1
Mapoly0033s0029 Marchantia polymorpha HOM05D005792 ORTHO05D007171 5.6e-13 79.3 161 33.5
SMO174G0053 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 4.7e-12 76.3 77 50.6
Cpa.g.sc26.236 Carica papaya HOM05D005792 ORTHO05D007171 3.2e-08 63.5 36 83.3
SEGI_02138 Sequoiadendron giganteum HOM05D005792 ORTHO05D007171 2.3e-06 57.4 46 52.2


User provided reference genes

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