Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.08G062600 Carya illinoinensis HOM05D008022 ORTHO05D010147 1.7e-90 336.3 212 100.0
CiPaw.07G154400 Carya illinoinensis HOM05D008022 ORTHO05D010147 1.4e-47 193.7 251 64.9
Gohir.D05G191600 Gossypium hirsutum HOM05D008022 ORTHO05D010147 4.0e-34 149.1 206 65.0
Gorai.009G196900 Gossypium raimondii HOM05D008022 ORTHO05D010147 2.6e-33 146.4 206 65.0
Gohir.A05G188500 Gossypium hirsutum HOM05D008022 ORTHO05D010147 6.3e-32 141.7 215 61.4
Cfa013902 Carpinus fangiana HOM05D002906 ORTHO05D003211 2.7e-30 136.3 205 67.3
Potri.005G234601 Populus trichocarpa HOM05D008022 ORTHO05D010147 1.7e-29 133.7 211 59.7
Lj1g0009874 Lotus japonicus HOM05D008022 ORTHO05D010147 9.4e-28 127.9 213 59.6
Phvul.001G009600 Phaseolus vulgaris HOM05D008022 ORTHO05D010147 1.2e-25 120.9 204 35.8
Medtr1g023270 Medicago truncatula HOM05D008022 ORTHO05D010147 1.5e-25 120.6 203 53.2
Atru.chr13.362 Acer truncatum HOM05D008022 ORTHO05D010147 2.0e-25 120.2 80 66.2
TWI12G0111 Tripterygium wilfordii HOM05D008022 ORTHO05D010147 2.6e-25 119.8 215 60.9
Lalb_Chr08g0246011 Lupinus albus HOM05D008022 ORTHO05D010147 4.4e-25 119.0 80 65.0
Lalb_Chr22g0354471 Lupinus albus HOM05D008022 ORTHO05D010147 5.7e-25 118.6 202 59.4
Manes.05G152650 Manihot esculenta HOM05D008022 ORTHO05D010147 1.7e-24 117.1 63 77.8
CSS0048901 Camellia sinensis var. sinensis HOM05D008022 ORTHO05D010147 1.1e-23 114.4 59 79.7
Glyma.17G255200 Glycine max HOM05D008022 ORTHO05D010147 1.4e-23 114.0 203 54.2
Duzib041G0305 Durio zibethinus HOM05D008022 ORTHO05D010147 2.4e-23 113.2 211 57.8
Psat6g005360 Pisum sativum HOM05D008022 ORTHO05D010147 2.4e-23 113.2 210 46.7
TPR.G40293 Trifolium pratense HOM05D008022 ORTHO05D010147 4.1e-23 112.5 214 44.4
Glyma.14G216600 Glycine max HOM05D008022 ORTHO05D010147 5.4e-23 112.1 204 54.4
CANSAT25G1466 Cannabis sativa HOM05D008022 ORTHO05D010147 1.2e-22 110.9 202 59.9
Eucgr.F01845 Eucalyptus grandis HOM05D008022 ORTHO05D010147 1.2e-22 110.9 80 60.0
Medtr3g113080 Medicago truncatula HOM05D008022 ORTHO05D010147 4.5e-22 109.0 77 61.0
Sed0002960 Sechium edule HOM05D008022 ORTHO05D010147 1.7e-21 107.1 90 56.7
Lj5g0000972 Lotus japonicus HOM05D008022 ORTHO05D010147 2.9e-21 106.3 79 58.2
CsaV3_7G006070 Cucumis sativus L. HOM05D008022 ORTHO05D010147 6.5e-21 105.1 80 61.2
MD15G1017600 Malus domestica HOM05D008022 ORTHO05D010147 8.5e-21 104.8 60 73.3
Nitab4.5_0000493g0010 Nicotiana tabacum HOM05D008022 ORTHO05D010147 7.2e-20 101.7 47 83.0
Cpa.g.sc140.17 Carica papaya HOM05D008022 ORTHO05D010147 9.4e-20 101.3 62 69.4
ECA236G3926 Erigeron canadensis HOM05D008022 ORTHO05D010147 6.1e-19 98.6 79 54.4
FvH4_2g39010 Fragaria vesca HOM05D008022 ORTHO05D010147 8.0e-19 98.2 60 66.7
Lsat_1_v5_gn_7_91921 Lactuca sativa HOM05D008022 ORTHO05D010147 1.8e-18 97.1 79 53.2
arahy.Tifrunner.gnm1.ann1.RV6KDM Arachis hypogaea HOM05D008022 ORTHO05D010147 2.3e-18 96.7 69 58.0
Cc10_g02120 Coffea canephora HOM05D008022 ORTHO05D010147 3.0e-18 96.3 56 67.9
PGR031G0261 Punica granatum HOM05D008022 ORTHO05D010147 3.0e-18 96.3 76 55.3
Nn5g29204 Nelumbo nucifera HOM05D008022 ORTHO05D010147 4.0e-18 95.9 80 53.8
EL10Ac1g00558 Beta vulgaris HOM05D008022 ORTHO05D010147 8.8e-18 94.7 45 82.2
MELO3C018685.2 Cucumis melo HOM05D008022 ORTHO05D010147 4.4e-17 92.4 78 52.6
VMungo1309G0619 Vigna mungo HOM05D002906 ORTHO05D003211 4.4e-17 92.4 54 61.1
arahy.Tifrunner.gnm1.ann1.QUSF5W Arachis hypogaea HOM05D008022 ORTHO05D010147 2.8e-16 89.7 199 55.8
PSO541G2481 Papaver somniferum HOM05D008022 ORTHO05D010147 2.7e-14 83.2 45 71.1
arahy.Tifrunner.gnm1.ann1.0AGT2R Arachis hypogaea HOM05D008022 ORTHO05D010147 5.9e-14 82.0 43 67.4
FAN27G1447 Fragaria x ananassa HOM05D008022 ORTHO05D010147 1.7e-13 80.5 53 64.2
BraA07t31648Z Brassica rapa HOM05D008022 ORTHO05D010147 2.3e-13 80.1 80 45.0
BraA02t07039Z Brassica rapa HOM05D008022 ORTHO05D010147 3.8e-13 79.3 80 46.2
BcaC08g47337 Brassica carinata HOM05D008022 ORTHO05D010147 5.0e-13 79.0 80 45.0
BcaC08g47338 Brassica carinata HOM05D008022 ORTHO05D010147 5.0e-13 79.0 80 45.0
Aqoxy6G02393 Aquilegia oxysepala HOM05D008022 ORTHO05D010147 1.1e-12 77.8 47 63.8
BcaC08g47037 Brassica carinata HOM05D008022 ORTHO05D010147 1.5e-12 77.4 80 45.0
C06p49540 Brassica napus HOM05D008022 ORTHO05D010147 1.5e-12 77.4 80 43.8
BolC6t39993H Brassica oleracea HOM05D008022 ORTHO05D010147 1.5e-12 77.4 80 43.8
AL2G35530 Arabidopsis lyrata HOM05D008022 ORTHO05D010147 1.9e-12 77.0 45 64.4
A02p20010 Brassica napus HOM05D008022 ORTHO05D010147 1.9e-12 77.0 80 45.0
A07p41120 Brassica napus HOM05D008022 ORTHO05D010147 1.9e-12 77.0 80 43.8
HPP92_017807 Vanilla planifolia HOM05D008022 ORTHO05D010147 3.3e-12 76.3 61 50.8
BcaC08g45567 Brassica carinata HOM05D008022 ORTHO05D010147 4.3e-12 75.9 80 42.5
C02p34060 Brassica napus HOM05D008022 ORTHO05D010147 4.3e-12 75.9 45 62.2
C06p32520 Brassica napus HOM05D008022 ORTHO05D010147 4.3e-12 75.9 80 42.5
BolC2t09304H Brassica oleracea HOM05D008022 ORTHO05D010147 4.3e-12 75.9 45 62.2
BolC6t38374H Brassica oleracea HOM05D008022 ORTHO05D010147 4.3e-12 75.9 80 42.5
BcaB05g24920 Brassica carinata HOM05D008022 ORTHO05D010147 2.8e-11 73.2 45 60.0
Carub.0002s2241 Capsella rubella HOM05D008022 ORTHO05D010147 3.6e-11 72.8 40 67.5
CARHR068950 Cardamine hirsuta HOM05D008022 ORTHO05D010147 3.6e-11 72.8 45 60.0
DCAR_017590 Daucus carota HOM05D000043 ORTHO05D000223 3.6e-11 72.8 67 52.2
BraA07t30517Z Brassica rapa HOM05D008022 ORTHO05D010147 4.7e-11 72.4 80 40.0
Prupe.1G370900 Prunus persica HOM05D008022 ORTHO05D010147 1.0e-10 71.2 33 78.8
unitig_8.g4921 Utricularia gibba HOM05D008022 ORTHO05D010147 2.3e-10 70.1 78 43.6
Thecc.08G037400 Theobroma cacao HOM05D008022 ORTHO05D010147 1.7e-08 63.9 80 43.8
CDE02G3345 Ceratophyllum demersum HOM05D008022 ORTHO05D010147 2.9e-08 63.2 42 54.8
Aqoxy5G01499 Aquilegia oxysepala HOM05D008022 ORTHO05D010147 6.4e-08 62.0 66 45.5
QL02p010690 Quercus lobata HOM05D008022 ORTHO05D010147 8.3e-08 61.6 54 63.0
QL02p010709 Quercus lobata HOM05D008022 ORTHO05D010147 1.1e-07 61.2 65 60.0
Haze_22583 Corylus avellana HOM05D002906 ORTHO05D003211 3.2e-07 59.7 61 63.9
Phvul.009G014200 Phaseolus vulgaris HOM05D008022 ORTHO05D010147 4.6e-06 55.8 60 38.3


User provided reference genes

Program Settings