Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.08G046900 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.0e-67 259.2 158 100.0
CiPaw.02G030800 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.6e-59 232.3 158 91.1
CiPaw.01G307400 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.7e-59 230.7 158 91.8
CiPaw.08G134700 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.7e-59 230.7 158 91.8
CiPaw.15G037700 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.2e-57 224.2 158 89.9
CiPaw.14G060500 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.7e-56 222.2 158 88.0
CiPaw.08G157400 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.1e-52 208.4 145 90.3
CiPaw.09G133100 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.1e-52 207.2 158 85.4
CiPaw.01G121200 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.9e-49 199.5 143 86.7
CiPaw.03G129800 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.4e-44 183.3 158 73.4
CiPaw.15G050900 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.5e-41 171.4 95 92.6
CiPaw.04G113500 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.0e-27 126.3 77 85.7
CiPaw.14G040600 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.7e-24 115.2 139 66.9
CiPaw.02G095000 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.3e-23 112.8 110 73.6
Haze_12994 Corylus avellana HOM05D001576 ORTHO05D000401 6.0e-19 98.2 134 57.5
CiPaw.01G067900 Carya illinoinensis HOM05D003118 ORTHO05D003618 2.1e-11 73.2 165 33.9
Hma1.2p1_0324F.1_g125640 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 6.6e-10 68.2 159 31.4
Rhsim04G0125600 Rhododendron simsii HOM05D001576 ORTHO05D000401 8.1e-08 61.2 149 34.2
Rhsim12G0031800 Rhododendron simsii HOM05D001576 ORTHO05D000401 8.1e-08 61.2 155 30.3
Rhsim05G0091700 Rhododendron simsii HOM05D001576 ORTHO05D000401 2.3e-07 59.7 162 32.1
Rhsim05G0092900 Rhododendron simsii HOM05D001576 ORTHO05D000401 2.3e-07 59.7 162 32.1
TWI36G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.3e-07 59.7 147 32.0
CSS0005302 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.1e-07 59.3 159 37.1
CSS0014799 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.1e-07 59.3 159 37.1
TWI74G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 4.0e-07 58.9 152 30.3
CSS0050513 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 8.9e-07 57.8 159 37.1
CSS0013580 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.2e-06 57.4 159 37.1
CSS0015368 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.2e-06 57.4 159 37.1
CSS0017473 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.2e-06 57.4 159 37.1
CSS0021320 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.2e-06 57.4 159 37.1
Ciclev10033751m.g Citrus clementina HOM05D001576 ORTHO05D000401 1.2e-06 57.4 146 34.9
CSS0012008 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.5e-06 57.0 159 37.1
CSS0004257 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.0e-06 56.6 159 37.1
TWI74G0871 Tripterygium wilfordii HOM05D025099 ORTHO05D000401 2.0e-06 56.6 151 43.7
CSS0014280 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D024710 3.4e-06 55.8 159 29.6
CSS0023792 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 4.4e-06 55.5 159 40.9
Ciclev10003979m.g Citrus clementina HOM05D001576 ORTHO05D000401 5.8e-06 55.1 143 37.8
Haze_05842 Corylus avellana HOM05D001081 ORTHO05D003320 5.8e-06 55.1 141 32.6


User provided reference genes

Program Settings