Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.08G040500 Carya illinoinensis HOM05D011714 ORTHO05D011286 5.4e-41 170.6 90 100.0
CiPaw.07G186400 Carya illinoinensis HOM05D011714 ORTHO05D011286 6.2e-21 104.0 90 71.1
QL02p095571 Quercus lobata HOM05D013360 ORTHO05D011286 3.4e-19 98.2 88 63.6
Haze_22172 Corylus avellana HOM05D011714 ORTHO05D011286 6.6e-15 84.0 89 56.2
Cfa013551 Carpinus fangiana HOM05D011714 ORTHO05D011286 7.3e-14 80.5 73 61.6
Prupe.1G097700 Prunus persica HOM05D022430 ORTHO05D011286 5.3e-12 74.3 90 50.0
Thecc.09G160300 Theobroma cacao HOM05D011714 ORTHO05D011286 9.0e-12 73.6 87 49.4
TAR383G0052 Trochodendron aralioides HOM05D011714 ORTHO05D011286 5.8e-11 70.9 85 47.1
FAN08G1756 Fragaria x ananassa HOM05D022430 ORTHO05D011286 1.3e-10 69.7 74 55.4
Atru.chr7.482 Acer truncatum HOM05D011714 ORTHO05D011286 1.7e-10 69.3 77 50.6
FAN17G1930 Fragaria x ananassa HOM05D022430 ORTHO05D011286 5.4e-09 64.3 74 54.1
RcHm_v2.0_Chr4g0404971 Rosa chinensis HOM05D022430 ORTHO05D011286 5.4e-09 64.3 91 48.4
COL.COLO4_06805 Corchorus olitorius HOM05D011714 ORTHO05D011286 9.3e-09 63.5 89 43.8
Gohir.D04G086400 Gossypium hirsutum HOM05D011714 ORTHO05D011286 9.3e-09 63.5 90 44.4
Gorai.012G096300 Gossypium raimondii HOM05D011714 ORTHO05D011286 9.3e-09 63.5 90 44.4
Lalb_Chr07g0180061 Lupinus albus HOM05D013360 ORTHO05D011286 1.2e-08 63.2 89 47.2
Nn8g40235 Nelumbo nucifera HOM05D011714 ORTHO05D011286 1.2e-08 63.2 56 51.8
Lalb_Chr13g0300551 Lupinus albus HOM05D013360 ORTHO05D011286 1.6e-08 62.8 89 44.9
Duzib187G0715 Durio zibethinus HOM05D011714 ORTHO05D011286 3.5e-08 61.6 91 44.0
Glyma.17G068900 Glycine max HOM05D013360 ORTHO05D011286 7.8e-08 60.5 84 46.4
Nn2g12547 Nelumbo nucifera HOM05D011714 ORTHO05D011286 1.3e-07 59.7 71 43.7
Glyma.13G091400 Glycine max HOM05D013360 ORTHO05D011286 6.6e-07 57.4 84 44.0
Glyma.12G162954 Glycine max HOM05D013360 ORTHO05D011286 1.5e-06 56.2 75 44.0
Nn2g12542 Nelumbo nucifera HOM05D011714 ORTHO05D011286 1.5e-06 56.2 88 46.6
Rhsim01G0012500 Rhododendron simsii HOM05D022430 ORTHO05D011286 2.5e-06 55.5 75 44.0
Thecc.09G160800 Theobroma cacao HOM05D016047 ORTHO05D011537 2.5e-06 55.5 79 44.3
Phvul.003G151400 Phaseolus vulgaris HOM05D013360 ORTHO05D011286 3.3e-06 55.1 72 43.1
Potri.018G099201 Populus trichocarpa HOM05D045012 ORTHO05D011286 3.3e-06 55.1 82 42.7
Aqoxy7G03244 Aquilegia oxysepala HOM05D011714 ORTHO05D011286 5.6e-06 54.3 81 44.4
Cpa.g.sc75.21 Carica papaya HOM05D013360 ORTHO05D011286 7.3e-06 53.9 74 41.9
Medtr4g129580 Medicago truncatula HOM05D013360 ORTHO05D011286 9.6e-06 53.5 85 41.2


User provided reference genes

Program Settings