Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.08G037100 Carya illinoinensis HOM05D001798 ORTHO05D005040 5.1e-60 234.2 116 100.0
CiPaw.07G191500 Carya illinoinensis HOM05D001798 ORTHO05D005040 5.3e-33 144.4 132 59.8
Haze_19626 Corylus avellana HOM05D001798 ORTHO05D005040 1.9e-30 136.0 132 63.6
Cfa016621 Carpinus fangiana HOM05D001798 ORTHO05D005040 1.2e-29 133.3 132 62.1
QL02p097578 Quercus lobata HOM05D001798 ORTHO05D005040 2.1e-29 132.5 131 58.8
Prupe.1G087800 Prunus persica HOM05D001798 ORTHO05D005040 1.2e-24 116.7 132 51.5
QL02p097572 Quercus lobata HOM05D001798 ORTHO05D005040 1.6e-24 116.3 130 56.2
Ciclev10009891m.g Citrus clementina HOM05D001798 ORTHO05D005040 1.3e-23 113.2 131 53.4
Dinv41255 Davidia involucrata HOM05D001798 ORTHO05D004054 2.2e-23 112.5 130 52.3
Potri.018G094100 Populus trichocarpa HOM05D001798 ORTHO05D005040 3.8e-23 111.7 133 54.1
RcHm_v2.0_Chr4g0402691 Rosa chinensis HOM05D001798 ORTHO05D005040 6.5e-23 110.9 129 48.8
MD12G1161200 Malus domestica HOM05D001798 ORTHO05D005040 1.1e-22 110.2 132 48.5
RcHm_v2.0_Chr4g0402701 Rosa chinensis HOM05D001798 ORTHO05D005040 1.9e-22 109.4 134 47.8
Atru.chr7.661 Acer truncatum HOM05D001798 ORTHO05D005040 2.5e-22 109.0 131 53.4
COL.COLO4_36848 Corchorus olitorius HOM05D001798 ORTHO05D005040 2.5e-22 109.0 131 53.4
Duzib150G1419 Durio zibethinus HOM05D001798 ORTHO05D005040 4.2e-22 108.2 128 53.1
Gorai.004G100700 Gossypium raimondii HOM05D001798 ORTHO05D005040 4.2e-22 108.2 128 53.9
CSS0007301 Camellia sinensis var. sinensis HOM05D001798 ORTHO05D005040 1.6e-21 106.3 136 48.5
Sabra18G0080900 Salix brachista HOM05D001798 ORTHO05D005040 1.6e-21 106.3 128 50.8
Hma1.2p1_1646F.1_g295510 Hydrangea macrophylla HOM05D001798 ORTHO05D005040 2.1e-21 105.9 132 51.5
Gohir.A08G085900 Gossypium hirsutum HOM05D001798 ORTHO05D005040 2.7e-21 105.5 128 53.1
Gohir.D08G094900 Gossypium hirsutum HOM05D001798 ORTHO05D005040 2.7e-21 105.5 128 53.1
Hma1.2p1_2478F.1_g322950 Hydrangea macrophylla HOM05D001798 ORTHO05D005040 2.7e-21 105.5 132 51.5
MD13G1257600 Malus domestica HOM05D001798 ORTHO05D005040 3.6e-21 105.1 132 47.7
Thecc.09G171700 Theobroma cacao HOM05D001798 ORTHO05D005040 6.1e-21 104.4 128 52.3
Duzib170G0014 Durio zibethinus HOM05D001798 ORTHO05D005040 1.0e-20 103.6 122 51.6
SGA_v2.0_scaffold301G47805 Striga asiatica HOM05D000485 ORTHO05D005040 1.4e-20 103.2 126 48.4
MSTRG.26226 Avicennia marina HOM05D001798 ORTHO05D005040 1.8e-20 102.8 120 51.7
Nn2g12701 Nelumbo nucifera HOM05D001798 ORTHO05D005040 2.3e-20 102.4 128 50.8
FvH4_4g09360 Fragaria vesca HOM05D001798 ORTHO05D005040 4.0e-20 101.7 129 45.0
Sopen11g004390 Solanum pennellii HOM05D001798 ORTHO05D005040 4.0e-20 101.7 131 48.1
FvH4_3g45900 Fragaria vesca HOM05D001798 ORTHO05D005040 5.2e-20 101.3 122 46.7
Cpa.g.sc95.60 Carica papaya HOM05D001798 ORTHO05D005040 6.8e-20 100.9 127 52.8
TWI34G0376 Tripterygium wilfordii HOM05D001798 ORTHO05D005040 6.8e-20 100.9 130 49.2
Aqoxy7G03082 Aquilegia oxysepala HOM05D001798 ORTHO05D005040 8.8e-20 100.5 130 45.4
THA.LOC104811795 Tarenaya hassleriana HOM05D001798 ORTHO05D005040 8.8e-20 100.5 131 51.9
Rhsim01G0006100 Rhododendron simsii HOM05D001798 ORTHO05D005040 1.2e-19 100.1 97 53.6
TWI34G1338 Tripterygium wilfordii HOM05D001798 ORTHO05D005040 1.2e-19 100.1 130 48.5
Manes.14G151300 Manihot esculenta HOM05D001798 ORTHO05D005040 1.5e-19 99.8 133 50.4
Solyc11g008600.1 Solanum lycopersicum HOM05D001798 ORTHO05D005040 1.5e-19 99.8 131 46.6
SGA_v2.0_scaffold12G06063 Striga asiatica HOM05D001798 ORTHO05D005040 2.0e-19 99.4 124 47.6
ClCG06G013270 Citrullus lanatus HOM05D001798 ORTHO05D005040 2.6e-19 99.0 128 52.3
CAN.G321.14 Capsicum annuum HOM05D001798 ORTHO05D005040 5.7e-19 97.8 139 43.9
CsaV3_1G031530 Cucumis sativus L. HOM05D001798 ORTHO05D005040 5.7e-19 97.8 120 51.7
PGSC0003DMG400016261 Solanum tuberosum HOM05D001798 ORTHO05D005040 5.7e-19 97.8 133 44.4
MELO3C017469.2 Cucumis melo HOM05D001798 ORTHO05D005040 1.3e-18 96.7 120 50.0
Eucgr.C00167 Eucalyptus grandis HOM05D001798 ORTHO05D005040 2.2e-18 95.9 130 47.7
FAN11G1762 Fragaria x ananassa HOM05D001798 ORTHO05D005040 3.7e-18 95.1 111 46.8
FAN22G0641 Fragaria x ananassa HOM05D001798 ORTHO05D005040 3.7e-18 95.1 122 45.1
Eucgr.C02285 Eucalyptus grandis HOM05D001798 ORTHO05D005040 1.1e-17 93.6 130 45.4
Peaxi162Scf00296g00124 Petunia axillaris HOM05D001798 ORTHO05D005040 1.8e-17 92.8 135 43.7
Sed0020469 Sechium edule HOM05D001798 ORTHO05D005040 1.8e-17 92.8 130 50.8
SGA_v2.0_scaffold69G23263 Striga asiatica HOM05D001798 ORTHO05D005040 2.4e-17 92.4 126 49.2
AT5G57510 Arabidopsis thaliana HOM05D001798 ORTHO05D005040 4.1e-17 91.7 130 47.7
CSS0019887 Camellia sinensis var. sinensis HOM05D001798 ORTHO05D005040 5.3e-17 91.3 123 45.5
TAR383G0769 Trochodendron aralioides HOM05D001798 ORTHO05D005040 5.3e-17 91.3 127 42.5
MSTRG.19701 Avicennia marina HOM05D001798 ORTHO05D005040 7.0e-17 90.9 123 48.8
CSS0005198 Camellia sinensis var. sinensis HOM05D001798 ORTHO05D005040 7.0e-17 90.9 123 45.5
CSS0011185 Camellia sinensis var. sinensis HOM05D001798 ORTHO05D005040 7.0e-17 90.9 123 45.5
CSS0022506 Camellia sinensis var. sinensis HOM05D001798 ORTHO05D005040 7.0e-17 90.9 123 45.5
THA.LOC104817796 Tarenaya hassleriana HOM05D001798 ORTHO05D005040 1.2e-16 90.1 115 47.8
Migut.K00248 Erythranthe guttata HOM05D001798 ORTHO05D005040 1.6e-16 89.7 142 43.7
FAN21G0239 Fragaria x ananassa HOM05D001798 ORTHO05D005040 1.6e-16 89.7 111 45.0
Sp6g19210 Schrenkiella parvula HOM05D001798 ORTHO05D005040 1.6e-16 89.7 130 46.9
Lalb_Chr12g0199341 Lupinus albus HOM05D001798 ORTHO05D005040 3.5e-16 88.6 127 42.5
Thhalv10015454m.g Eutrema salsugineum HOM05D001798 ORTHO05D005040 5.9e-16 87.8 130 46.2
Glyma.13G095700 Glycine max HOM05D001798 ORTHO05D005040 5.9e-16 87.8 129 44.2
Medtr4g128470 Medicago truncatula HOM05D001798 ORTHO05D005040 5.9e-16 87.8 128 43.0
AL8G33450 Arabidopsis lyrata HOM05D001798 ORTHO05D005040 1.0e-15 87.0 131 45.0
AL8G33510 Arabidopsis lyrata HOM05D001798 ORTHO05D005040 1.0e-15 87.0 131 45.0
CARHR271290 Cardamine hirsuta HOM05D001798 ORTHO05D005040 1.0e-15 87.0 128 42.2
Eucgr.C02286 Eucalyptus grandis HOM05D001798 ORTHO05D005040 1.0e-15 87.0 122 45.9
SalBow1G2776 Salvia bowleyana HOM05D001798 ORTHO05D005040 1.3e-15 86.7 112 47.3
VMungo1215G0796 Vigna mungo HOM05D001798 ORTHO05D005040 1.3e-15 86.7 133 41.4
Carub.0008s1801 Capsella rubella HOM05D001798 ORTHO05D005040 1.7e-15 86.3 131 44.3
Potri.018G006800 Populus trichocarpa HOM05D001798 ORTHO05D005040 2.2e-15 85.9 131 42.0
BcaB08g36104 Brassica carinata HOM05D001798 ORTHO05D005040 3.8e-15 85.1 129 45.0
Glyma.17G064300 Glycine max HOM05D001798 ORTHO05D005040 6.5e-15 84.3 95 49.5
SalBow6G3226 Salvia bowleyana HOM05D001798 ORTHO05D005040 6.5e-15 84.3 130 43.8
PGR142G4397 Punica granatum HOM05D001798 ORTHO05D005040 8.5e-15 84.0 127 43.3
COL.COLO4_19032 Corchorus olitorius HOM05D001798 ORTHO05D005040 1.1e-14 83.6 126 41.3
Gohir.D06G107900 Gossypium hirsutum HOM05D001798 ORTHO05D005040 1.5e-14 83.2 127 37.8
SalBow6G3242 Salvia bowleyana HOM05D001798 ORTHO05D005040 1.5e-14 83.2 122 44.3
C02p14230 Brassica napus HOM05D001798 ORTHO05D005040 1.9e-14 82.8 129 45.0
Migut.J01450 Erythranthe guttata HOM05D001798 ORTHO05D005040 1.9e-14 82.8 132 44.7
Potri.006G273500 Populus trichocarpa HOM05D001798 ORTHO05D005040 1.9e-14 82.8 129 38.8
Potri.006G273566 Populus trichocarpa HOM05D001798 ORTHO05D005040 1.9e-14 82.8 129 38.8
BcaC03g14152 Brassica carinata HOM05D001798 ORTHO05D005040 2.5e-14 82.4 129 45.0
CiPaw.08G019800 Carya illinoinensis HOM05D001798 ORTHO05D005040 3.2e-14 82.0 128 41.4
Ca_21215_v3 Cicer arietinum L. HOM05D001798 ORTHO05D005040 5.5e-14 81.3 80 53.8
A02p08470 Brassica napus HOM05D001798 ORTHO05D005040 7.2e-14 80.9 129 45.0
BraA02t05918Z Brassica rapa HOM05D001798 ORTHO05D005040 7.2e-14 80.9 129 45.0
Phvul.003G146800 Phaseolus vulgaris HOM05D001798 ORTHO05D005040 7.2e-14 80.9 130 41.5
Manes.16G135500 Manihot esculenta HOM05D001798 ORTHO05D005040 9.4e-14 80.5 125 43.2
BcaC04g19961 Brassica carinata HOM05D001798 ORTHO05D005040 1.2e-13 80.1 86 51.2
BolC9t57787H Brassica oleracea HOM05D001798 ORTHO05D005040 1.2e-13 80.1 86 51.2
Sc01g0002270 Simmondsia chinensis HOM05D001798 ORTHO05D005040 1.2e-13 80.1 107 43.9
BolC2t07547H Brassica oleracea HOM05D001798 ORTHO05D005040 1.6e-13 79.7 120 44.2
Psat4g011600 Pisum sativum HOM05D001798 ORTHO05D005040 1.6e-13 79.7 87 51.7
QL12p025154 Quercus lobata HOM05D001798 ORTHO05D005040 2.1e-13 79.3 121 41.3
Sabra18G0014500 Salix brachista HOM05D000280 ORTHO05D006100 4.7e-13 78.2 131 40.5
Gorai.010G122600 Gossypium raimondii HOM05D001798 ORTHO05D005040 6.1e-13 77.8 127 37.0
Lsat_1_v5_gn_7_54461 Lactuca sativa HOM05D001798 ORTHO05D005040 6.1e-13 77.8 120 44.2
TPR.G5377 Trifolium pratense HOM05D001798 ORTHO05D005040 6.1e-13 77.8 89 51.7
Lj4g0012331 Lotus japonicus HOM05D001798 ORTHO05D005040 8.0e-13 77.4 125 41.6
Duzib187G0913 Durio zibethinus HOM05D001798 ORTHO05D005040 1.4e-12 76.6 127 39.4
Haze_21745 Corylus avellana HOM05D001798 ORTHO05D005040 1.8e-12 76.3 129 41.1
Gohir.A06G105500 Gossypium hirsutum HOM05D001798 ORTHO05D005040 1.8e-12 76.3 127 36.2
AUR62020597 Chenopodium quinoa HOM05D001798 ORTHO05D005040 2.3e-12 75.9 129 40.3
Aa31LG3G13380 Aethionema arabicum HOM05D001798 ORTHO05D005040 4.0e-12 75.1 116 44.0
BcaB05g22348 Brassica carinata HOM05D001798 ORTHO05D005040 5.2e-12 74.7 122 42.6
Haze_21738 Corylus avellana HOM05D001798 ORTHO05D005040 5.2e-12 74.7 83 51.8
ECA240G2061 Erigeron canadensis HOM05D001798 ORTHO05D005040 5.2e-12 74.7 147 38.1
FAN20G2332 Fragaria x ananassa HOM05D001798 ORTHO05D005040 5.2e-12 74.7 125 38.4
MBI16_g35923_MAGBIO Magnolia biondii HOM05D001798 ORTHO05D005040 1.2e-11 73.6 120 37.5
Duzib168G0008 Durio zibethinus HOM05D001798 ORTHO05D005040 1.5e-11 73.2 119 39.5
Manes.03G004000 Manihot esculenta HOM05D001798 ORTHO05D005040 4.4e-11 71.6 87 47.1
Prupe.1G460000 Prunus persica HOM05D001798 ORTHO05D005040 7.5e-11 70.9 108 41.7
HanXRQChr09g0254491 Helianthus annuus HOM05D001798 ORTHO05D005040 9.8e-11 70.5 137 37.2
AUR62009071 Chenopodium quinoa HOM05D001798 ORTHO05D005040 1.3e-10 70.1 130 38.5
Haze_21741 Corylus avellana HOM05D001798 ORTHO05D005040 1.3e-10 70.1 127 40.2
Haze_21742 Corylus avellana HOM05D001798 ORTHO05D005040 1.3e-10 70.1 127 40.2
FvH4_2g36750 Fragaria vesca HOM05D001798 ORTHO05D005040 1.3e-10 70.1 126 40.5
MBI16_g35924_MAGBIO Magnolia biondii HOM05D001798 ORTHO05D005040 1.3e-10 70.1 120 37.5
Sabra06G0212200 Salix brachista HOM05D001798 ORTHO05D005040 1.3e-10 70.1 121 35.5
Ciclev10010207m.g Citrus clementina HOM05D001798 ORTHO05D005040 1.7e-10 69.7 86 50.0
RcHm_v2.0_Chr6g0305001 Rosa chinensis HOM05D001798 ORTHO05D005040 1.7e-10 69.7 125 36.8
Ciclev10010310m.g Citrus clementina HOM05D001798 ORTHO05D005040 3.7e-10 68.6 103 46.6
Thecc.09G007300 Theobroma cacao HOM05D001798 ORTHO05D005040 3.7e-10 68.6 79 49.4
Cfa013271 Carpinus fangiana HOM05D001798 ORTHO05D005040 4.8e-10 68.2 127 37.8
FAN27G0855 Fragaria x ananassa HOM05D001798 ORTHO05D005040 4.8e-10 68.2 124 37.9
MBI16_g35927_MAGBIO Magnolia biondii HOM05D000772 ORTHO05D005040 4.8e-10 68.2 89 41.6
Cfa013270 Carpinus fangiana HOM05D001798 ORTHO05D005040 6.3e-10 67.8 86 50.0
Sabra06G0211900 Salix brachista HOM05D001798 ORTHO05D005040 1.1e-09 67.0 122 34.4
Cpa.g.sc23.17 Carica papaya HOM05D001798 ORTHO05D005040 3.1e-09 65.5 122 39.3
Ah.05g179040 Amaranthus hybridus HOM05D001798 ORTHO05D005040 4.1e-09 65.1 112 41.1
CANSAT11G0905 Cannabis sativa HOM05D001798 ORTHO05D005040 4.1e-09 65.1 160 36.2
AUR62022665 Chenopodium quinoa HOM05D001798 ORTHO05D005040 5.4e-09 64.7 109 40.4
RcHm_v2.0_Chr1g0336341 Rosa chinensis HOM05D001798 ORTHO05D005040 9.1e-09 63.9 99 40.4
MD15G1107700 Malus domestica HOM05D001798 ORTHO05D005040 1.2e-08 63.5 111 37.8
HanXRQChr05g0137241 Helianthus annuus HOM05D001798 ORTHO05D005040 1.6e-08 63.2 126 37.3
Lsat_1_v5_gn_8_67120 Lactuca sativa HOM05D001798 ORTHO05D005040 2.0e-08 62.8 135 34.8
MBI16_g35928_MAGBIO Magnolia biondii HOM05D001798 ORTHO05D005040 2.7e-08 62.4 88 39.8
ClCG10G000980 Citrullus lanatus HOM05D001798 ORTHO05D022392 4.5e-08 61.6 104 37.5
PGR044G1765 Punica granatum HOM05D001798 ORTHO05D005040 5.9e-08 61.2 126 34.1
PGSC0003DMG400026318 Solanum tuberosum HOM05D001798 ORTHO05D005040 7.7e-08 60.8 65 52.3
EL10Ac2g03758 Beta vulgaris HOM05D001798 ORTHO05D005040 2.9e-07 58.9 145 32.4
MD08G1128200 Malus domestica HOM05D001798 ORTHO05D005040 5.0e-07 58.2 107 40.2
Sed0003670 Sechium edule HOM05D001798 ORTHO05D022392 5.0e-07 58.2 72 44.4
HPP92_017412 Vanilla planifolia HOM05D001798 ORTHO05D005040 5.0e-07 58.2 162 30.2
FAN15G2712 Fragaria x ananassa HOM05D001798 ORTHO05D005040 6.6e-07 57.8 119 38.7
Ah.11g043870 Amaranthus hybridus HOM05D001798 ORTHO05D005040 1.1e-06 57.0 127 31.5
MELO3C013791.2 Cucumis melo HOM05D001798 ORTHO05D022392 1.5e-06 56.6 42 61.9
PSO349G0296 Papaver somniferum HOM05D001798 ORTHO05D005040 2.5e-06 55.8 39 59.0
HPP92_010486 Vanilla planifolia HOM05D001798 ORTHO05D005040 3.3e-06 55.5 160 32.5
Atru.chr7.2645 Acer truncatum HOM05D001798 ORTHO05D005040 5.5e-06 54.7 82 41.5
Nitab4.5_0004131g0060 Nicotiana tabacum HOM05D001798 ORTHO05D005040 5.5e-06 54.7 43 60.5
Nitab4.5_0004131g0070 Nicotiana tabacum HOM05D001798 ORTHO05D005040 7.2e-06 54.3 37 62.2
CiPaw.07G212400 Carya illinoinensis HOM05D001798 ORTHO05D005040 9.5e-06 53.9 114 36.0


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