Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.08G030500 Carya illinoinensis HOM05D009196 ORTHO05D010649 1.2e-55 219.5 111 100.0
Haze_22065 Corylus avellana HOM05D009196 ORTHO05D010649 4.6e-26 121.3 112 58.9
CiPaw.07G200200 Carya illinoinensis HOM05D009196 ORTHO05D010649 3.1e-22 108.6 112 58.9
Prupe.1G068200 Prunus persica HOM05D009196 ORTHO05D010649 9.0e-14 80.5 110 48.2
RcHm_v2.0_Chr4g0398461 Rosa chinensis HOM05D009196 ORTHO05D010649 1.2e-13 80.1 111 46.8
MD16G1241400 Malus domestica HOM05D009196 ORTHO05D010649 2.0e-13 79.3 112 48.2
GSVIVG01029261001 Vitis vinifera HOM05D009196 ORTHO05D010649 1.7e-12 76.3 59 62.7
Potri.006G071700 Populus trichocarpa HOM05D009196 ORTHO05D010649 2.2e-12 75.9 117 41.9
Dinv41206 Davidia involucrata HOM05D009196 ORTHO05D010649 2.5e-11 72.4 110 41.8
FAN22G0689 Fragaria x ananassa HOM05D009196 ORTHO05D010649 9.4e-11 70.5 111 45.9
TAR383G0890 Trochodendron aralioides HOM05D009196 ORTHO05D010649 2.1e-10 69.3 77 48.1
Lalb_Chr13g0299801 Lupinus albus HOM05D013602 ORTHO05D010649 6.1e-10 67.8 112 42.9
Sed0002154 Sechium edule HOM05D024728 ORTHO05D010649 6.1e-10 67.8 111 37.8
Thecc.08G165100 Theobroma cacao HOM05D009196 ORTHO05D010649 6.1e-10 67.8 113 37.2
FAN17G1659 Fragaria x ananassa HOM05D009196 ORTHO05D010649 1.4e-09 66.6 111 44.1
Sabra06G0053400 Salix brachista HOM05D009196 ORTHO05D010649 1.4e-09 66.6 104 39.4
FAN07G2147 Fragaria x ananassa HOM05D009196 ORTHO05D010649 1.8e-09 66.2 111 44.1
FvH4_4g06540 Fragaria vesca HOM05D009196 ORTHO05D010649 5.1e-09 64.7 111 44.1
COL.COLO4_25057 Corchorus olitorius HOM05D009196 ORTHO05D010649 6.7e-09 64.3 72 47.2
Lalb_Chr12g0199731 Lupinus albus HOM05D013602 ORTHO05D010649 6.7e-09 64.3 110 40.9
Ciclev10010003m.g Citrus clementina HOM05D009196 ORTHO05D010649 1.1e-08 63.5 110 42.7
Hma1.2p1_0726F.1_g208980 Hydrangea macrophylla HOM05D009196 ORTHO05D010649 1.5e-08 63.2 108 38.0
FAN12G2730 Fragaria x ananassa HOM05D009196 ORTHO05D010649 1.9e-08 62.8 111 43.2
TPR.G5378 Trifolium pratense HOM05D013602 ORTHO05D010649 2.5e-08 62.4 112 42.9
Actinidia01298 Actinidia chinensis HOM05D009196 ORTHO05D010649 3.3e-08 62.0 112 35.7
ClCG06G013880 Citrullus lanatus HOM05D024728 ORTHO05D010649 4.3e-08 61.6 111 37.8
Ca_21271_v3 Cicer arietinum L. HOM05D013602 ORTHO05D010649 2.2e-07 59.3 71 43.7
Medtr4g126770 Medicago truncatula HOM05D013602 ORTHO05D010649 2.2e-07 59.3 110 38.2
Glyma.13G102700 Glycine max HOM05D013602 ORTHO05D010649 2.8e-07 58.9 111 41.4
DCAR_017990 Daucus carota HOM05D009196 ORTHO05D010649 1.1e-06 57.0 77 48.1
Gohir.A05G248400 Gossypium hirsutum HOM05D009196 ORTHO05D010649 1.1e-06 57.0 71 47.9
CANSAT11G1417 Cannabis sativa HOM05D009196 ORTHO05D010649 1.4e-06 56.6 110 41.8
Gohir.D05G246200 Gossypium hirsutum HOM05D009196 ORTHO05D010649 1.4e-06 56.6 71 47.9
Manes.14G174300 Manihot esculenta HOM05D009196 ORTHO05D010649 1.8e-06 56.2 106 40.6
Gorai.009G262400 Gossypium raimondii HOM05D009196 ORTHO05D010649 3.1e-06 55.5 70 42.9
CsaV3_1G032080 Cucumis sativus L. HOM05D024728 ORTHO05D010649 4.1e-06 55.1 108 35.2
Lj4g0016279 Lotus japonicus HOM05D013602 ORTHO05D010649 6.9e-06 54.3 65 44.6


User provided reference genes

Program Settings