Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.08G017800 Carya illinoinensis HOM05D006422 ORTHO05D007992 2.6e-121 438.7 219 100.0
Cfa013253 Carpinus fangiana HOM05D006422 ORTHO05D007992 3.2e-87 325.5 241 73.4
CiPaw.07G214400 Carya illinoinensis HOM05D006422 ORTHO05D007992 3.1e-82 308.9 239 71.5
QL12p024696 Quercus lobata HOM05D006422 ORTHO05D007992 1.4e-71 273.5 250 65.6
Prupe.1G462100 Prunus persica HOM05D006422 ORTHO05D007992 3.5e-70 268.9 237 64.1
MD15G1109900 Malus domestica HOM05D006422 ORTHO05D007992 2.3e-69 266.2 238 63.0
RcHm_v2.0_Chr6g0312201 Rosa chinensis HOM05D006422 ORTHO05D007992 6.7e-69 264.6 238 62.2
Atru.chr7.2615_Atru.chr7.2616 Acer truncatum HOM05D006422 ORTHO05D007992 4.3e-68 261.9 224 63.8
FvH4_2g30680 Fragaria vesca HOM05D006422 ORTHO05D007992 9.6e-68 260.8 237 61.2
FAN24G2382 Fragaria x ananassa HOM05D006422 ORTHO05D007992 3.7e-67 258.8 238 60.9
GSVIVG01035544001 Vitis vinifera HOM05D006422 ORTHO05D007992 4.0e-66 255.4 234 61.5
ClCG08G012780 Citrullus lanatus HOM05D006422 ORTHO05D007992 5.3e-66 255.0 228 64.0
Manes.16G136400 Manihot esculenta HOM05D006422 ORTHO05D007992 6.9e-66 254.6 238 61.3
Lj5g0012981 Lotus japonicus HOM05D006422 ORTHO05D007992 9.0e-66 254.2 202 67.3
TAR383G0184 Trochodendron aralioides HOM05D006422 ORTHO05D007992 1.5e-65 253.4 237 62.0
CANSAT25G0758 Cannabis sativa HOM05D006422 ORTHO05D007992 2.6e-65 252.7 236 59.7
FAN27G3442 Fragaria x ananassa HOM05D006422 ORTHO05D007992 1.0e-64 250.8 239 60.7
Nn1g01726 Nelumbo nucifera HOM05D006422 ORTHO05D007992 3.8e-64 248.8 233 61.4
Thecc.09G005200 Theobroma cacao HOM05D006422 ORTHO05D007992 3.8e-64 248.8 205 65.9
Ciclev10009324m.g Citrus clementina HOM05D006422 ORTHO05D007992 2.5e-63 246.1 212 64.2
Duzib168G1765 Durio zibethinus HOM05D006422 ORTHO05D007992 7.1e-63 244.6 245 59.6
Phvul.001G058000 Phaseolus vulgaris HOM05D006422 ORTHO05D007992 2.1e-62 243.0 233 57.9
VMungo0647G2190 Vigna mungo HOM05D006422 ORTHO05D007992 3.5e-62 242.3 233 57.5
Dinv10868 Davidia involucrata HOM05D006422 ORTHO05D007992 1.8e-61 240.0 234 59.8
Dinv26550 Davidia involucrata HOM05D006422 ORTHO05D007992 1.8e-61 240.0 234 59.8
Ca_12880_v3 Cicer arietinum L. HOM05D006422 ORTHO05D007992 3.9e-61 238.8 231 58.9
Potri.006G276400 Populus trichocarpa HOM05D006422 ORTHO05D007992 1.9e-60 236.5 238 58.8
Sabra06G0214100 Salix brachista HOM05D006422 ORTHO05D007992 4.3e-60 235.3 238 58.8
Medtr1g009980 Medicago truncatula HOM05D006422 ORTHO05D007992 1.6e-59 233.4 231 57.1
Hma1.2p1_0534F.1_g173720 Hydrangea macrophylla HOM05D006422 ORTHO05D007992 2.1e-59 233.0 225 59.6
Lalb_Chr14g0362181 Lupinus albus HOM05D006422 ORTHO05D007992 1.8e-58 229.9 186 66.1
COL.COLO4_18610 Corchorus olitorius HOM05D006422 ORTHO05D007992 2.4e-58 229.6 198 63.6
C03p11290 Brassica napus HOM05D006422 ORTHO05D007992 3.1e-58 229.2 238 55.5
AUR62020627 Chenopodium quinoa HOM05D006422 ORTHO05D007992 3.1e-58 229.2 217 60.4
BcaB01g04822 Brassica carinata HOM05D006422 ORTHO05D007992 4.1e-58 228.8 236 55.5
BolC3t13599H Brassica oleracea HOM05D006422 ORTHO05D007992 1.5e-57 226.9 238 55.0
Aqoxy5G03915 Aquilegia oxysepala HOM05D006422 ORTHO05D007992 2.0e-57 226.5 191 64.9
Thhalv10014537m.g Eutrema salsugineum HOM05D006422 ORTHO05D007992 2.0e-57 226.5 244 54.9
BcaB01g04848 Brassica carinata HOM05D006422 ORTHO05D007992 2.6e-57 226.1 241 53.9
SGA_v2.0_scaffold27G11666 Striga asiatica HOM05D006422 ORTHO05D007992 5.9e-57 224.9 194 62.4
TPR.G11997 Trifolium pratense HOM05D006422 ORTHO05D007992 5.9e-57 224.9 220 57.3
TWI34G0909 Tripterygium wilfordii HOM05D006422 ORTHO05D007992 5.9e-57 224.9 225 59.1
arahy.Tifrunner.gnm1.ann1.43EIBT Arachis hypogaea HOM05D006422 ORTHO05D007992 7.6e-57 224.6 203 60.6
EL10Ac2g03719 Beta vulgaris HOM05D006422 ORTHO05D007992 1.0e-56 224.2 220 59.1
Sp6g24440 Schrenkiella parvula HOM05D006422 ORTHO05D007992 1.0e-56 224.2 243 53.9
arahy.Tifrunner.gnm1.ann1.D9GJPD Arachis hypogaea HOM05D006422 ORTHO05D007992 1.3e-56 223.8 203 60.6
Solyc08g006160.4 Solanum lycopersicum HOM05D006422 ORTHO05D007992 1.3e-56 223.8 223 59.2
FAN20G1184 Fragaria x ananassa HOM05D006422 ORTHO05D007992 1.7e-56 223.4 218 57.8
PSO170G4757 Papaver somniferum HOM05D006422 ORTHO05D007992 3.8e-56 222.2 244 54.9
A03p09710 Brassica napus HOM05D006422 ORTHO05D007992 5.0e-56 221.9 238 53.8
BraA03t10287Z Brassica rapa HOM05D006422 ORTHO05D007992 5.0e-56 221.9 238 53.8
Cc04_g09430 Coffea canephora HOM05D006422 ORTHO05D007992 6.5e-56 221.5 196 63.3
PGR042G1463 Punica granatum HOM05D006422 ORTHO05D007992 6.5e-56 221.5 203 60.1
Sopen08g002130 Solanum pennellii HOM05D006422 ORTHO05D007992 6.5e-56 221.5 223 58.7
Eucgr.C02103 Eucalyptus grandis HOM05D006422 ORTHO05D007992 8.5e-56 221.1 241 55.6
PGSC0003DMG400009533 Solanum tuberosum HOM05D006422 ORTHO05D007992 8.5e-56 221.1 200 63.0
Actinidia03579 Actinidia chinensis HOM05D006422 ORTHO05D007992 1.1e-55 220.7 230 56.5
PSO017G3510 Papaver somniferum HOM05D006422 ORTHO05D007992 1.4e-55 220.3 209 59.3
Psat6g032000 Pisum sativum HOM05D006422 ORTHO05D007992 1.4e-55 220.3 199 60.3
BcaB08g36552 Brassica carinata HOM05D006422 ORTHO05D007992 2.5e-55 219.5 241 52.3
A10p19790 Brassica napus HOM05D006422 ORTHO05D007992 3.2e-55 219.2 204 57.4
BraA10t44055Z Brassica rapa HOM05D006422 ORTHO05D007992 3.2e-55 219.2 204 57.4
Sc09g0007930 Simmondsia chinensis HOM05D006422 ORTHO05D007992 3.2e-55 219.2 236 53.4
THA.LOC104811048 Tarenaya hassleriana HOM05D006422 ORTHO05D007992 3.2e-55 219.2 243 54.3
Migut.A00443 Erythranthe guttata HOM05D006422 ORTHO05D007992 4.2e-55 218.8 243 53.9
AT5G19940 Arabidopsis thaliana HOM05D006422 ORTHO05D007992 5.5e-55 218.4 243 53.1
CAN.G1364.3 Capsicum annuum HOM05D006422 ORTHO05D007992 7.2e-55 218.0 220 57.3
Haze_21696 Corylus avellana HOM05D006422 ORTHO05D007992 9.3e-55 217.6 161 72.7
AL6G31470 Arabidopsis lyrata HOM05D006422 ORTHO05D007992 1.2e-54 217.2 244 52.5
BcaC04g19400 Brassica carinata HOM05D006422 ORTHO05D007992 1.2e-54 217.2 241 53.9
C09p56110 Brassica napus HOM05D006422 ORTHO05D007992 1.2e-54 217.2 241 53.9
BolC9t58478H Brassica oleracea HOM05D006422 ORTHO05D007992 1.2e-54 217.2 241 53.9
CARHR192910 Cardamine hirsuta HOM05D006422 ORTHO05D007992 1.2e-54 217.2 244 52.0
Carub.0006s1831 Capsella rubella HOM05D006422 ORTHO05D007992 3.6e-54 215.7 244 52.5
Gohir.A06G106700 Gossypium hirsutum HOM05D006422 ORTHO05D007992 7.9e-54 214.5 193 60.6
MBI13_g31531_MAGBIO Magnolia biondii HOM05D006422 ORTHO05D007992 1.3e-53 213.8 179 62.6
Aa31LG9G9500 Aethionema arabicum HOM05D006422 ORTHO05D007992 3.0e-53 212.6 212 54.7
Nitab4.5_0000025g0080 Nicotiana tabacum HOM05D006422 ORTHO05D007992 3.9e-53 212.2 212 58.0
AUR62038756 Chenopodium quinoa HOM05D006422 ORTHO05D007992 1.1e-52 210.7 163 67.5
Gohir.D06G108900 Gossypium hirsutum HOM05D006422 ORTHO05D007992 1.9e-52 209.9 189 59.8
CDE04G2326 Ceratophyllum demersum HOM05D006422 ORTHO05D007992 2.5e-52 209.5 193 58.0
Glyma.17G201600 Glycine max HOM05D006422 ORTHO05D007992 4.3e-52 208.8 206 58.3
Gorai.010G123700 Gossypium raimondii HOM05D006422 ORTHO05D007992 4.3e-52 208.8 189 59.3
Lsat_1_v5_gn_5_61061 Lactuca sativa HOM05D006422 ORTHO05D007992 7.4e-52 208.0 217 55.8
MSTRG.11814 Avicennia marina HOM05D006422 ORTHO05D007992 1.3e-51 207.2 206 57.8
Peaxi162Scf00045g01530 Petunia axillaris HOM05D006422 ORTHO05D007992 1.3e-51 207.2 232 54.3
Rhsim07G0170200 Rhododendron simsii HOM05D006422 ORTHO05D007992 1.3e-51 207.2 222 54.1
HPP92_004705 Vanilla planifolia HOM05D006422 ORTHO05D007992 6.3e-51 204.9 226 51.8
Nitab4.5_0003259g0070 Nicotiana tabacum HOM05D006422 ORTHO05D007992 2.4e-50 203.0 211 55.9
HanXRQChr13g0412481 Helianthus annuus HOM05D006422 ORTHO05D007992 5.3e-50 201.8 192 57.3
vmacro05107 Vaccinium macrocarpon HOM05D006422 ORTHO05D007992 7.7e-49 198.0 165 62.4
DCAR_003025 Daucus carota HOM05D006422 ORTHO05D007992 2.9e-48 196.1 171 62.0
unitig_748.g7381 Utricularia gibba HOM05D006422 ORTHO05D007992 4.2e-47 192.2 215 52.6
ATR0626G032 Amborella trichopoda HOM05D006422 ORTHO05D007992 7.2e-47 191.4 221 51.1
MELO3C011201.2 Cucumis melo HOM05D006422 ORTHO05D007992 1.0e-45 187.6 178 60.7
Os04g0607000 Oryza sativa ssp. japonica HOM05D006422 ORTHO05D007992 6.7e-45 184.9 209 52.6
FAN15G3645 Fragaria x ananassa HOM05D006422 ORTHO05D007992 1.5e-44 183.7 224 50.4
Zm00001eb071430 Zea mays HOM05D006422 ORTHO05D007992 5.7e-44 181.8 184 56.5
Oeu018400.2 Olea europaea HOM05D006422 ORTHO05D007992 6.3e-43 178.3 155 61.3
Ah.11g043920 Amaranthus hybridus HOM05D006422 ORTHO05D007992 5.3e-42 175.3 168 59.5
ECA240G0283 Erigeron canadensis HOM05D000069 ORTHO05D000060 5.9e-41 171.8 237 46.0
Hma1.2p1_0534F.1_g173730 Hydrangea macrophylla HOM05D006422 ORTHO05D007992 1.8e-37 160.2 167 57.5
SEGI_33970 Sequoiadendron giganteum HOM05D006422 ORTHO05D007992 6.3e-35 151.8 172 47.1
Lj7A749G60 Lonicera japonica HOM05D006422 ORTHO05D007992 8.2e-35 151.4 120 64.2
CSS0034711 Camellia sinensis var. sinensis HOM05D006422 ORTHO05D007992 1.3e-32 144.1 139 60.4
CSS0017479 Camellia sinensis var. sinensis HOM05D006422 ORTHO05D007992 9.4e-31 137.9 140 55.7
AagrBONN_evm.TU.Sc2ySwM_228.4709 Anthoceros agrestis HOM05D006422 ORTHO05D007992 2.3e-29 133.3 169 43.2
Mapoly0021s0119 Marchantia polymorpha HOM05D006422 ORTHO05D007992 1.2e-28 131.0 242 37.6
Pp3c13_4790 Physcomitrium patens HOM05D006422 ORTHO05D007992 8.2e-27 124.8 249 32.9
SMO364G0843 Selaginella moellendorffii HOM05D006422 ORTHO05D007992 2.0e-25 120.2 164 42.7
Gorai.002G101300 Gossypium raimondii HOM05D006422 ORTHO05D007992 5.9e-25 118.6 111 56.8
Oeu014126.1 Olea europaea HOM05D006422 ORTHO05D007992 3.0e-21 106.3 92 60.9
CSS0035518 Camellia sinensis var. sinensis HOM05D006422 ORTHO05D007992 1.8e-18 97.1 161 39.1
Hund19396 Selenicereus undatus HOM05D006422 ORTHO05D007992 2.2e-16 90.1 100 53.0
CBR_g3792 Chara braunii HOM05D006422 ORTHO05D007992 3.8e-16 89.4 233 29.2
Cre12.g502250 Chlamydomonas reinhardtii HOM05D006422 ORTHO05D007992 1.4e-10 70.9 180 32.2
MCO15G093 Micromonas commoda HOM05D006422 ORTHO05D007992 7.8e-09 65.1 236 28.4
PRCOL_00004658 Prasinoderma coloniale HOM05D006422 ORTHO05D007992 1.7e-08 63.9 92 39.1
Cre07.g325736 Chlamydomonas reinhardtii HOM05D006422 ORTHO05D007992 6.1e-06 55.5 158 26.6


User provided reference genes

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