Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.08G017600 Carya illinoinensis HOM05D007671 ORTHO05D009777 2.9e-47 191.4 88 100.0
Prupe.1G117400 Prunus persica HOM05D007671 ORTHO05D009777 1.4e-17 92.8 51 78.4
Prupe.2G226800 Prunus persica HOM05D007671 ORTHO05D009777 1.8e-17 92.4 50 80.0
Potri.005G106933 Populus trichocarpa HOM05D007671 ORTHO05D009777 5.3e-17 90.9 53 71.7
Potri.005G106800 Populus trichocarpa HOM05D007671 ORTHO05D009777 1.2e-16 89.7 50 76.0
Potri.005G107066 Populus trichocarpa HOM05D007671 ORTHO05D009777 1.2e-16 89.7 50 76.0
Potri.005G106600 Populus trichocarpa HOM05D007671 ORTHO05D009777 2.6e-16 88.6 50 74.0
Prupe.1G113700 Prunus persica HOM05D007671 ORTHO05D009777 2.6e-16 88.6 51 76.5
Potri.004G202466 Populus trichocarpa HOM05D007671 ORTHO05D009777 3.4e-16 88.2 50 74.0
Prupe.8G172200 Prunus persica HOM05D007671 ORTHO05D009777 3.4e-16 88.2 52 73.1
CiPaw.02G098900 Carya illinoinensis HOM05D007671 ORTHO05D009777 7.7e-16 87.0 49 77.6
Gohir.A11G237966 Gossypium hirsutum HOM05D007671 ORTHO05D009777 7.7e-16 87.0 53 71.7
Manes.06G007051 Manihot esculenta HOM05D007671 ORTHO05D009777 1.3e-15 86.3 48 79.2
Manes.11G047175 Manihot esculenta HOM05D007671 ORTHO05D009777 2.9e-15 85.1 53 69.8
Prupe.1G384200 Prunus persica HOM05D007671 ORTHO05D009777 2.9e-15 85.1 50 74.0
Gorai.005G063700 Gossypium raimondii HOM05D007671 ORTHO05D009777 6.5e-15 84.0 53 67.9
Gorai.005G064600 Gossypium raimondii HOM05D007671 ORTHO05D009777 6.5e-15 84.0 53 67.9
Gorai.005G063500 Gossypium raimondii HOM05D007671 ORTHO05D009777 1.4e-14 82.8 50 70.0
Gohir.A11G238032 Gossypium hirsutum HOM05D007671 ORTHO05D009777 2.5e-14 82.0 53 67.9
Gohir.D02G057375 Gossypium hirsutum HOM05D007671 ORTHO05D009777 2.5e-14 82.0 53 67.9
Prupe.1G232200 Prunus persica HOM05D007671 ORTHO05D009777 2.5e-14 82.0 48 75.0
CiPaw.01G168300 Carya illinoinensis HOM05D007671 ORTHO05D009777 9.4e-14 80.1 52 67.3
Prupe.1G098500 Prunus persica HOM05D007671 ORTHO05D009777 1.6e-13 79.3 50 70.0
Manes.01G190050 Manihot esculenta HOM05D007671 ORTHO05D009777 2.1e-13 79.0 48 70.8
Prupe.1G136000 Prunus persica HOM05D007671 ORTHO05D009777 3.6e-13 78.2 50 64.0
Manes.06G006950 Manihot esculenta HOM05D007671 ORTHO05D009777 6.1e-13 77.4 44 75.0
Gohir.D02G056933 Gossypium hirsutum HOM05D007671 ORTHO05D009777 1.0e-12 76.6 53 67.9
Prupe.1G136200 Prunus persica HOM05D007671 ORTHO05D009777 5.1e-12 74.3 49 69.4
PGSC0003DMG401028532 Solanum tuberosum HOM05D007671 ORTHO05D009777 8.8e-12 73.6 44 72.7
Thhalv10009901m.g Eutrema salsugineum HOM05D007671 ORTHO05D009777 1.1e-11 73.2 50 62.0
Carub.0005s0319 Capsella rubella HOM05D007671 ORTHO05D009777 2.0e-11 72.4 50 62.0
Gohir.1Z049332 Gossypium hirsutum HOM05D007671 ORTHO05D009777 2.5e-11 72.0 50 60.0
Carub.0005s0180 Capsella rubella HOM05D007671 ORTHO05D009777 5.7e-11 70.9 50 60.0
FAN20G2582 Fragaria x ananassa HOM05D007671 ORTHO05D035424 9.7e-11 70.1 43 69.8
Glyma.10G232100 Glycine max HOM05D007671 ORTHO05D009777 1.3e-10 69.7 48 62.5
Gohir.A02G052202 Gossypium hirsutum HOM05D007671 ORTHO05D009777 2.8e-10 68.6 51 62.7
Os02g0808601 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 2.8e-10 68.6 40 72.5
Gorai.007G266800 Gossypium raimondii HOM05D007671 ORTHO05D009777 3.7e-10 68.2 53 58.5
Manes.14G093601 Manihot esculenta HOM05D007671 ORTHO05D009777 3.7e-10 68.2 45 66.7
Prupe.2G064500 Prunus persica HOM05D007671 ORTHO05D009777 3.7e-10 68.2 51 62.7
Os02g0193933 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 4.8e-10 67.8 40 75.0
Migut.N01038 Erythranthe guttata HOM05D007671 ORTHO05D009777 6.3e-10 67.4 50 60.0
A06p47690 Brassica napus HOM05D007671 ORTHO05D009777 8.2e-10 67.0 50 60.0
Prupe.1G135800 Prunus persica HOM05D007671 ORTHO05D009777 1.4e-09 66.2 43 65.1
C03p61310 Brassica napus HOM05D007671 ORTHO05D009777 4.1e-09 64.7 49 53.1
Os02g0811650 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 1.2e-08 63.2 36 75.0
Potri.007G002300 Populus trichocarpa HOM05D007671 ORTHO05D009777 1.5e-08 62.8 40 67.5
Os07g0595750 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 4.5e-08 61.2 40 67.5
Os02g0158701 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 1.0e-07 60.1 38 68.4
Os02g0811501 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 1.0e-07 60.1 40 67.5
Os07g0661450 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 1.0e-07 60.1 38 68.4
EL10Ac5g10726 Beta vulgaris HOM05D002875 ORTHO05D003215 4.2e-06 54.7 29 79.3
Migut.E00372 Erythranthe guttata HOM05D007671 ORTHO05D009777 4.2e-06 54.7 49 57.1
Os07g0685600 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 4.2e-06 54.7 38 63.2
Manes.01G151801 Manihot esculenta HOM05D007671 ORTHO05D009777 5.5e-06 54.3 31 74.2
arahy.Tifrunner.gnm1.ann1.JY00AE Arachis hypogaea HOM05D007174 ORTHO05D009061 7.2e-06 53.9 27 81.5
Gohir.D02G057184 Gossypium hirsutum HOM05D007671 ORTHO05D009777 9.4e-06 53.5 32 68.8


User provided reference genes

Program Settings