Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.08G005700 Carya illinoinensis HOM05D006008 ORTHO05D007334 5.1e-92 343.6 686 100.0
QL02p018792 Quercus lobata HOM05D006008 ORTHO05D007334 6.7e-68 263.5 686 93.0
Haze_21405 Corylus avellana HOM05D006008 ORTHO05D007334 6.3e-66 256.9 686 93.3
Cfa013044 Carpinus fangiana HOM05D006008 ORTHO05D007334 4.5e-64 250.8 686 93.3
Sc09g0010690 Simmondsia chinensis HOM05D006008 ORTHO05D007334 2.8e-50 204.9 120 84.2
Dinv08184 Davidia involucrata HOM05D006008 ORTHO05D007334 1.5e-48 199.1 119 84.9
Sabra06G0206900 Salix brachista HOM05D006008 ORTHO05D007334 2.6e-48 198.4 120 81.7
Potri.006G264800 Populus trichocarpa HOM05D006008 ORTHO05D007334 7.7e-48 196.8 120 80.8
TAR362G1189 Trochodendron aralioides HOM05D006008 ORTHO05D007334 7.7e-48 196.8 120 84.2
Manes.08G047700 Manihot esculenta HOM05D006008 ORTHO05D007334 1.3e-47 196.1 120 80.8
Duzib187G0883 Durio zibethinus HOM05D006008 ORTHO05D007334 1.9e-46 192.2 120 80.8
CSS0011965 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 2.5e-46 191.8 120 80.0
CSS0032373 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 2.5e-46 191.8 120 80.0
AUR62041936 Chenopodium quinoa HOM05D006008 ORTHO05D007334 7.2e-46 190.3 120 79.2
arahy.Tifrunner.gnm1.ann1.HZWF25 Arachis hypogaea HOM05D006008 ORTHO05D007334 1.2e-45 189.5 118 76.3
Lj7P735T18 Lonicera japonica HOM05D006008 ORTHO05D007334 1.2e-45 189.5 119 80.7
Atru.chr7.2558 Acer truncatum HOM05D006008 ORTHO05D007334 1.6e-45 189.1 119 78.2
TWI63G1661 Tripterygium wilfordii HOM05D006008 ORTHO05D007334 1.6e-45 189.1 120 77.5
CSS0033722 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 2.7e-45 188.3 120 78.3
Hund20025 Selenicereus undatus HOM05D006008 ORTHO05D007334 2.7e-45 188.3 120 77.5
RcHm_v2.0_Chr6g0299351 Rosa chinensis HOM05D006008 ORTHO05D007334 3.6e-45 188.0 686 83.8
CANSAT56G1562 Cannabis sativa HOM05D006008 ORTHO05D007334 6.1e-45 187.2 120 78.3
Nitab4.5_0001663g0180 Nicotiana tabacum HOM05D006008 ORTHO05D007334 6.1e-45 187.2 120 79.2
Thecc.09G015100 Theobroma cacao HOM05D006008 ORTHO05D007334 8.0e-45 186.8 120 79.2
arahy.Tifrunner.gnm1.ann1.E59C1E Arachis hypogaea HOM05D006008 ORTHO05D007334 1.0e-44 186.4 120 75.0
Nitab4.5_0000147g0080 Nicotiana tabacum HOM05D006008 ORTHO05D007334 1.4e-44 186.0 120 79.2
Actinidia23109 Actinidia chinensis HOM05D006008 ORTHO05D007334 1.8e-44 185.7 120 74.2
FAN15G1576 Fragaria x ananassa HOM05D006008 ORTHO05D007334 2.3e-44 185.3 120 75.8
Solyc04g015440.4 Solanum lycopersicum HOM05D006008 ORTHO05D007334 2.3e-44 185.3 120 77.5
Sopen04g007490 Solanum pennellii HOM05D006008 ORTHO05D007334 2.3e-44 185.3 120 77.5
PGSC0003DMG400027232 Solanum tuberosum HOM05D006008 ORTHO05D007334 2.3e-44 185.3 120 77.5
CANSAT54G1994 Cannabis sativa HOM05D006008 ORTHO05D007334 3.0e-44 184.9 120 75.8
CAN.G676.42 Capsicum annuum HOM05D006008 ORTHO05D007334 3.0e-44 184.9 120 77.5
Oeu001622.3 Olea europaea HOM05D006008 ORTHO05D007334 3.0e-44 184.9 120 80.8
Cpa.g.sc148.18 Carica papaya HOM05D006008 ORTHO05D007334 4.0e-44 184.5 120 75.0
FvH4_2g41180 Fragaria vesca HOM05D006008 ORTHO05D007334 4.0e-44 184.5 120 74.2
FAN20G2406 Fragaria x ananassa HOM05D006008 ORTHO05D007334 4.0e-44 184.5 120 75.0
FAN27G1628 Fragaria x ananassa HOM05D006008 ORTHO05D007334 4.0e-44 184.5 120 75.0
MELO3C032315.2 Cucumis melo HOM05D006008 ORTHO05D007334 5.2e-44 184.1 120 75.8
Eucgr.C01897 Eucalyptus grandis HOM05D006008 ORTHO05D007334 5.2e-44 184.1 107 84.1
VMungo1309G2388 Vigna mungo HOM05D006008 ORTHO05D007334 5.2e-44 184.1 120 74.2
PSO384G1678 Papaver somniferum HOM05D006008 ORTHO05D007334 6.7e-44 183.7 120 75.0
Aqoxy7G02519 Aquilegia oxysepala HOM05D006008 ORTHO05D007334 1.1e-43 183.0 120 77.5
Peaxi162Scf01286g00125 Petunia axillaris HOM05D006008 ORTHO05D007334 1.1e-43 183.0 120 75.8
Ah.04g163370 Amaranthus hybridus HOM05D002153 ORTHO05D002137 1.5e-43 182.6 119 77.3
Gorai.009G063400 Gossypium raimondii HOM05D006008 ORTHO05D007334 1.5e-43 182.6 120 75.8
Rhsim07G0155900 Rhododendron simsii HOM05D006008 ORTHO05D007334 1.5e-43 182.6 120 74.2
ClCG05G016190 Citrullus lanatus HOM05D006008 ORTHO05D007334 2.0e-43 182.2 120 75.0
Migut.A00359 Erythranthe guttata HOM05D006008 ORTHO05D007334 2.0e-43 182.2 120 74.2
Phvul.009G086500 Phaseolus vulgaris HOM05D006008 ORTHO05D007334 2.0e-43 182.2 120 74.2
CSS0030467 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 2.6e-43 181.8 120 75.0
Gohir.D05G062300 Gossypium hirsutum HOM05D006008 ORTHO05D007334 3.3e-43 181.4 120 75.0
PGR142G1849 Punica granatum HOM05D006008 ORTHO05D007334 4.4e-43 181.0 120 76.7
CANSAT21G0760 Cannabis sativa HOM05D006008 ORTHO05D007334 1.7e-42 179.1 120 72.5
DCAR_022863 Daucus carota HOM05D006008 ORTHO05D007334 1.7e-42 179.1 120 72.5
Gohir.A05G060100 Gossypium hirsutum HOM05D006008 ORTHO05D007334 1.7e-42 179.1 120 74.2
CSS0025914 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 2.8e-42 178.3 120 75.0
CANSAT21G2303 Cannabis sativa HOM05D006008 ORTHO05D007334 8.2e-42 176.8 120 71.7
Lsat_1_v5_gn_2_36140 Lactuca sativa HOM05D006008 ORTHO05D007334 1.1e-41 176.4 120 73.3
ECA234G3283 Erigeron canadensis HOM05D006008 ORTHO05D007334 1.8e-41 175.6 115 74.8
Glyma.06G061000 Glycine max HOM05D006008 ORTHO05D007334 1.8e-41 175.6 120 72.5
ATR0580G290 Amborella trichopoda HOM05D006008 ORTHO05D007334 9.1e-41 173.3 120 73.3
CANSAT80G2648 Cannabis sativa HOM05D006008 ORTHO05D007334 1.2e-40 172.9 120 73.3
Prupe.1G394600 Prunus persica HOM05D006008 ORTHO05D007334 1.2e-40 172.9 154 55.8
CANSAT80G0905 Cannabis sativa HOM05D006008 ORTHO05D007334 2.6e-40 171.8 120 69.2
vmacro05220 Vaccinium macrocarpon HOM05D006008 ORTHO05D007334 4.5e-40 171.0 120 69.2
Sed0007713 Sechium edule HOM05D006008 ORTHO05D007334 5.9e-40 170.6 120 70.8
CSS0046362 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 7.7e-40 170.2 117 72.6
BraA03t15143Z Brassica rapa HOM05D006008 ORTHO05D007334 1.0e-39 169.9 120 69.2
Lalb_Chr23g0268201 Lupinus albus HOM05D006008 ORTHO05D007334 1.7e-39 169.1 119 68.1
Ciclev10007356m.g Citrus clementina HOM05D006008 ORTHO05D007334 5.0e-39 167.5 107 77.6
SalBow4G1429 Salvia bowleyana HOM05D006008 ORTHO05D007334 6.5e-39 167.2 120 70.0
SGA_v2.0_scaffold147G36344 Striga asiatica HOM05D006008 ORTHO05D007334 6.5e-39 167.2 115 68.7
THA.LOC104803618 Tarenaya hassleriana HOM05D006008 ORTHO05D007334 1.1e-38 166.4 120 70.0
Medtr3g105900 Medicago truncatula HOM05D006008 ORTHO05D007334 1.5e-38 166.0 120 68.3
Ca_15782_v3 Cicer arietinum L. HOM05D006008 ORTHO05D007334 3.2e-38 164.9 120 70.0
FAN20G1003 Fragaria x ananassa HOM05D006008 ORTHO05D007334 1.2e-37 162.9 148 53.4
Lj1g0008194 Lotus japonicus HOM05D006008 ORTHO05D007334 8.0e-37 160.2 120 66.7
CANSAT54G0183 Cannabis sativa HOM05D006008 ORTHO05D007334 1.4e-36 159.5 120 69.2
arahy.Tifrunner.gnm1.ann1.6M8E1A Arachis hypogaea HOM05D006008 ORTHO05D007334 2.3e-36 158.7 101 73.3
MD08G1055800 Malus domestica HOM05D006008 ORTHO05D007334 3.0e-36 158.3 100 80.0
arahy.Tifrunner.gnm1.ann1.83E5X5 Arachis hypogaea HOM05D006008 ORTHO05D007334 6.8e-36 157.1 100 74.0
CSS0013958 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 8.8e-36 156.8 120 68.3
COL.COLO4_18956 Corchorus olitorius HOM05D006008 ORTHO05D007334 1.2e-35 156.4 154 51.3
Psat5g033520 Pisum sativum HOM05D006008 ORTHO05D007334 3.4e-35 154.8 120 63.3
TPR.G1871 Trifolium pratense HOM05D006008 ORTHO05D007334 4.4e-35 154.5 120 64.2
CSS0018849 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.3e-34 152.9 120 68.3
GSVIVG01035975001 Vitis vinifera HOM05D006008 ORTHO05D007334 2.8e-34 151.8 149 64.4
CsaV3_4G036480 Cucumis sativus L. HOM05D006008 ORTHO05D007334 7.0e-33 147.1 148 48.0
HanXRQChr09g0270581 Helianthus annuus HOM05D006008 ORTHO05D007334 5.9e-32 144.1 102 67.6
A03p61020 Brassica napus HOM05D006008 ORTHO05D007334 5.0e-31 141.0 101 68.3
CSS0002096 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 6.5e-31 140.6 120 64.2
Lalb_Chr23g0268191 Lupinus albus HOM05D006008 ORTHO05D007334 8.5e-31 140.2 152 49.3
Aa31LG2G18380 Aethionema arabicum HOM05D006008 ORTHO05D007334 4.2e-30 137.9 101 69.3
C07p58920 Brassica napus HOM05D006008 ORTHO05D007334 9.4e-30 136.7 98 68.4
BolC7t46339H Brassica oleracea HOM05D006008 ORTHO05D007334 9.4e-30 136.7 98 68.4
Nn7g36097 Nelumbo nucifera HOM05D006008 ORTHO05D007334 3.6e-29 134.8 92 72.8
Glyma.04G060500 Glycine max HOM05D006008 ORTHO05D007334 6.1e-29 134.0 154 46.1
Carub.0007s0870 Capsella rubella HOM05D006008 ORTHO05D007334 1.4e-28 132.9 101 63.4
CDE02G3851 Ceratophyllum demersum HOM05D006008 ORTHO05D007334 2.0e-27 129.0 129 53.5
BcaNung01494 Brassica carinata HOM05D006008 ORTHO05D007334 2.6e-27 128.6 98 65.3
AL7G20130 Arabidopsis lyrata HOM05D006008 ORTHO05D007334 1.3e-26 126.3 92 67.4
EL10Ac4g08536 Beta vulgaris HOM05D006008 ORTHO05D007334 8.3e-26 123.6 81 74.1
CARHR239780 Cardamine hirsuta HOM05D006008 ORTHO05D007334 8.3e-26 123.6 89 67.4
Cc08_g07210 Coffea canephora HOM05D006008 ORTHO05D007334 1.4e-25 122.9 85 70.6
CSS0031354 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 7.0e-25 120.6 107 53.3
Thhalv10024264m.g Eutrema salsugineum HOM05D006008 ORTHO05D007334 7.0e-25 120.6 88 64.8
A01p06430 Brassica napus HOM05D006008 ORTHO05D007334 4.5e-24 117.9 92 63.0
Sp7g29660 Schrenkiella parvula HOM05D006008 ORTHO05D007334 4.5e-24 117.9 87 65.5
BraA01t00604Z Brassica rapa HOM05D006008 ORTHO05D007334 5.9e-24 117.5 92 62.0
Zm00001eb393290 Zea mays HOM05D006008 ORTHO05D007334 1.7e-23 115.9 94 59.6
C01p07070 Brassica napus HOM05D006008 ORTHO05D007334 2.3e-23 115.5 91 62.6
MBI15_g18236_MAGBIO Magnolia biondii HOM05D006008 ORTHO05D007334 8.6e-23 113.6 78 73.1
BcaC09g51977 Brassica carinata HOM05D006008 ORTHO05D007334 1.9e-22 112.5 92 59.8
ATR0180G020 Amborella trichopoda HOM05D006008 ORTHO05D007334 5.6e-22 110.9 88 63.6
AT4G31850 Arabidopsis thaliana HOM05D006008 ORTHO05D007334 5.6e-22 110.9 81 66.7
Os10g0421800 Oryza sativa ssp. japonica HOM05D006008 ORTHO05D007334 7.3e-22 110.5 88 61.4
CSS0039067 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.8e-20 105.9 120 52.5
MSTRG.11782 Avicennia marina HOM05D006008 ORTHO05D007334 2.3e-20 105.5 143 37.1
Nn7g36096 Nelumbo nucifera HOM05D006008 ORTHO05D007334 6.8e-20 104.0 146 39.0
BcaNung03118 Brassica carinata HOM05D006008 ORTHO05D007334 2.0e-19 102.4 146 39.7
SEGI_41266 Sequoiadendron giganteum HOM05D006008 ORTHO05D007334 7.5e-19 100.5 121 51.2
Nn7g37618 Nelumbo nucifera HOM05D006008 ORTHO05D007334 9.8e-19 100.1 146 52.7
AUR62041257 Chenopodium quinoa HOM05D006008 ORTHO05D007334 3.7e-18 98.2 142 37.3
BolC1t00699H Brassica oleracea HOM05D006008 ORTHO05D007334 7.0e-17 94.0 146 50.7
CANSAT21G2219 Cannabis sativa HOM05D006008 ORTHO05D007334 9.2e-17 93.6 64 71.9
HPP92_017173 Vanilla planifolia HOM05D006008 ORTHO05D007334 5.0e-15 87.8 146 34.9
SEGI_02316 Sequoiadendron giganteum HOM05D006008 ORTHO05D007334 5.6e-14 84.3 88 50.0
QL04p089735 Quercus lobata HOM05D022192 ORTHO05D009908 4.6e-08 64.7 38 84.2
THA.LOC104807228 Tarenaya hassleriana HOM05D003056 ORTHO05D003422 5.0e-07 61.2 116 34.5
Nitab4.5_0007438g0010 Nicotiana tabacum HOM05D005622 ORTHO05D002854 3.3e-06 58.5 105 37.1
PSO339G0892 Papaver somniferum HOM05D007559 ORTHO05D009642 7.3e-06 57.4 85 35.3
PSO384G3238 Papaver somniferum HOM05D007559 ORTHO05D009642 9.5e-06 57.0 85 35.3


User provided reference genes

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