Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G236600 Carya illinoinensis HOM05D007955 ORTHO05D010034 1.2e-56 223.0 120 100.0
Haze_21296 Corylus avellana HOM05D007955 ORTHO05D010034 6.5e-42 174.1 121 80.2
Cfa012936 Carpinus fangiana HOM05D007955 ORTHO05D010034 7.9e-40 167.2 121 77.7
QL02p025993 Quercus lobata HOM05D007955 ORTHO05D010034 2.2e-37 159.1 126 67.5
Dinv41742 Davidia involucrata HOM05D007955 ORTHO05D010034 8.8e-31 137.1 120 60.8
MD15G1408300 Malus domestica HOM05D007955 ORTHO05D010034 9.1e-28 127.1 120 53.3
Sc23g0001440 Simmondsia chinensis HOM05D007955 ORTHO05D010034 2.0e-27 125.9 120 55.8
arahy.Tifrunner.gnm1.ann1.T5U9L2 Arachis hypogaea HOM05D007955 ORTHO05D010034 3.5e-27 125.2 84 71.4
Peaxi162Scf00391g00733 Petunia axillaris HOM05D007955 ORTHO05D010034 4.5e-27 124.8 123 65.0
arahy.Tifrunner.gnm1.ann1.6E9FUG Arachis hypogaea HOM05D007955 ORTHO05D010034 5.9e-27 124.4 84 71.4
Potri.013G108100 Populus trichocarpa HOM05D007955 ORTHO05D010034 7.7e-27 124.0 115 58.3
PGR042G1239 Punica granatum HOM05D007955 ORTHO05D010034 6.5e-26 120.9 117 56.4
Duzib177G0365 Durio zibethinus HOM05D007955 ORTHO05D010034 1.1e-25 120.2 103 64.1
Eucgr.F03002 Eucalyptus grandis HOM05D007955 ORTHO05D010034 1.1e-25 120.2 125 53.6
CANSAT25G1976 Cannabis sativa HOM05D007955 ORTHO05D010034 1.6e-24 116.3 84 67.9
HanXRQChr02g0044251 Helianthus annuus HOM05D007955 ORTHO05D010034 1.6e-24 116.3 84 65.5
Manes.18G103900 Manihot esculenta HOM05D007955 ORTHO05D010034 1.6e-24 116.3 76 71.1
CARHR023000 Cardamine hirsuta HOM05D007955 ORTHO05D010034 2.1e-24 115.9 126 52.4
RcHm_v2.0_Chr7g0228151 Rosa chinensis HOM05D007955 ORTHO05D010034 2.1e-24 115.9 101 62.4
Sp1g20140 Schrenkiella parvula HOM05D007955 ORTHO05D010034 2.1e-24 115.9 125 52.8
PGSC0003DMG400009285 Solanum tuberosum HOM05D007955 ORTHO05D010034 2.1e-24 115.9 121 61.2
AT1G22630 Arabidopsis thaliana HOM05D007955 ORTHO05D010034 2.7e-24 115.5 120 54.2
FvH4_5g32101 Fragaria vesca HOM05D007955 ORTHO05D010034 2.7e-24 115.5 116 57.8
Nitab4.5_0002013g0010 Nicotiana tabacum HOM05D007955 ORTHO05D010034 2.7e-24 115.5 122 51.6
Sopen11g011230 Solanum pennellii HOM05D007955 ORTHO05D010034 2.7e-24 115.5 124 52.4
Thecc.08G188200 Theobroma cacao HOM05D007955 ORTHO05D010034 2.7e-24 115.5 121 56.2
DCAR_001459 Daucus carota HOM05D007955 ORTHO05D010034 3.6e-24 115.2 126 50.0
Rhsim06G0114600 Rhododendron simsii HOM05D007955 ORTHO05D010034 3.6e-24 115.2 130 53.8
HPP92_004623 Vanilla planifolia HOM05D007955 ORTHO05D010034 3.6e-24 115.2 94 70.2
Nitab4.5_0003211g0020 Nicotiana tabacum HOM05D007955 ORTHO05D010034 4.7e-24 114.8 122 50.8
AL1G36160 Arabidopsis lyrata HOM05D007955 ORTHO05D010034 8.0e-24 114.0 122 52.5
BcaC07g39172 Brassica carinata HOM05D007955 ORTHO05D010034 1.0e-23 113.6 84 66.7
ECA247G2775 Erigeron canadensis HOM05D001035 ORTHO05D001045 1.0e-23 113.6 76 68.4
Glyma.08G239000 Glycine max HOM05D007955 ORTHO05D010034 1.0e-23 113.6 121 56.2
TWI14G1427 Tripterygium wilfordii HOM05D007955 ORTHO05D010034 1.4e-23 113.2 121 51.2
Gohir.A05G273100 Gossypium hirsutum HOM05D007955 ORTHO05D010034 1.8e-23 112.8 100 64.0
Hund16783 Selenicereus undatus HOM05D007955 ORTHO05D010034 2.3e-23 112.5 77 66.2
Thhalv10009125m.g Eutrema salsugineum HOM05D007955 ORTHO05D010034 3.0e-23 112.1 126 50.0
Gohir.D05G275500 Gossypium hirsutum HOM05D007955 ORTHO05D010034 3.0e-23 112.1 100 64.0
Gorai.009G288600 Gossypium raimondii HOM05D007955 ORTHO05D010034 3.0e-23 112.1 100 64.0
Solyc11g021365.2 Solanum lycopersicum HOM05D007955 ORTHO05D010034 3.0e-23 112.1 124 50.8
Aqoxy6G00096 Aquilegia oxysepala HOM05D007955 ORTHO05D010034 4.0e-23 111.7 120 56.7
Hma1.2p1_0004F.1_g003980 Hydrangea macrophylla HOM05D007955 ORTHO05D010034 4.0e-23 111.7 138 47.8
Lsat_1_v5_gn_1_12280 Lactuca sativa HOM05D007955 ORTHO05D010034 4.0e-23 111.7 85 63.5
Medtr4g032905 Medicago truncatula HOM05D007955 ORTHO05D010034 4.0e-23 111.7 122 61.5
Aa31LG7G6520 Aethionema arabicum HOM05D007955 ORTHO05D010034 5.2e-23 111.3 76 67.1
CSS0011086 Camellia sinensis var. sinensis HOM05D007955 ORTHO05D010034 5.2e-23 111.3 76 68.4
Carub.0001s2214 Capsella rubella HOM05D007955 ORTHO05D010034 5.2e-23 111.3 84 64.3
THA.LOC104809734 Tarenaya hassleriana HOM05D007955 ORTHO05D010034 6.7e-23 110.9 94 58.5
VMungo1127G1330 Vigna mungo HOM05D007955 ORTHO05D010034 6.7e-23 110.9 118 51.7
BolC8t49802H Brassica oleracea HOM05D007955 ORTHO05D010034 1.2e-22 110.2 84 64.3
TPR.G34150 Trifolium pratense HOM05D007955 ORTHO05D010034 4.4e-22 108.2 122 60.7
EL10Ac1g00118 Beta vulgaris HOM05D007955 ORTHO05D010034 1.7e-21 106.3 98 58.2
CDE05G3389 Ceratophyllum demersum HOM05D007955 ORTHO05D010034 3.7e-21 105.1 69 69.6
MELO3C021951.2 Cucumis melo HOM05D007955 ORTHO05D010034 1.1e-20 103.6 77 64.9
CsaV3_2G014460 Cucumis sativus L. HOM05D007955 ORTHO05D010034 1.1e-20 103.6 77 64.9
SEGI_23617 Sequoiadendron giganteum HOM05D007955 ORTHO05D010034 1.1e-20 103.6 111 61.3
SGA_v2.0_scaffold24G10574 Striga asiatica HOM05D007955 ORTHO05D010034 1.4e-20 103.2 118 61.0
ClCG00G002970 Citrullus lanatus HOM05D007955 ORTHO05D010034 1.8e-20 102.8 65 70.8
ClCG09G017850 Citrullus lanatus HOM05D007955 ORTHO05D010034 1.8e-20 102.8 65 70.8
MBI03_g18672_MAGBIO Magnolia biondii HOM05D007955 ORTHO05D010034 9.1e-20 100.5 109 49.5
Zm00001eb356110 Zea mays HOM05D007955 ORTHO05D010034 2.7e-19 99.0 91 64.8
PSO170G1023 Papaver somniferum HOM05D007955 ORTHO05D010034 3.5e-19 98.6 120 58.3
PSO782G1662 Papaver somniferum HOM05D007955 ORTHO05D010034 5.9e-19 97.8 120 59.2
SMO119G0376 Selaginella moellendorffii HOM05D007955 ORTHO05D010034 2.9e-18 95.5 62 82.3
unitig_578.g16590 Utricularia gibba HOM05D007955 ORTHO05D010034 2.9e-18 95.5 66 86.4
C08p21650 Brassica napus HOM05D000726 ORTHO05D010034 8.5e-18 94.0 76 60.5
Prupe.1G552800 Prunus persica HOM05D007955 ORTHO05D010034 1.9e-17 92.8 121 48.8
Migut.C01298 Erythranthe guttata HOM05D007955 ORTHO05D010034 3.2e-17 92.0 110 48.2
Cc00_g22060 Coffea canephora HOM05D007955 ORTHO05D010034 7.2e-17 90.9 58 74.1
AagrBONN_evm.TU.Sc2ySwM_228.898 Anthoceros agrestis HOM05D007955 ORTHO05D010034 9.4e-17 90.5 81 72.8
A08p28450 Brassica napus HOM05D000726 ORTHO05D010034 9.4e-17 90.5 76 59.2
FAN08G1854 Fragaria x ananassa HOM05D000666 ORTHO05D001431 8.0e-16 87.4 55 76.4
FAN13G0857 Fragaria x ananassa HOM05D000666 ORTHO05D001431 2.3e-15 85.9 55 74.5
BraA08t34774Z Brassica rapa HOM05D000726 ORTHO05D010034 3.0e-15 85.5 89 51.7
Mapoly0510s0001 Marchantia polymorpha HOM05D007955 ORTHO05D010034 8.8e-15 84.0 119 53.8
Pp3c19_10130 Physcomitrium patens HOM05D007955 ORTHO05D010034 7.5e-14 80.9 52 69.2
Sed0016691 Sechium edule HOM05D007955 ORTHO05D010034 9.1e-12 73.9 95 45.3
Nn3g20179 Nelumbo nucifera HOM05D007955 ORTHO05D010034 7.7e-11 70.9 46 71.7
Os05g0105800 Oryza sativa ssp. japonica HOM05D007955 ORTHO05D010034 5.5e-09 64.7 45 66.7
vmacro12469 Vaccinium macrocarpon HOM05D007955 ORTHO05D010034 4.7e-08 61.6 46 65.2


User provided reference genes

Program Settings