Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 2.6e-72 275.4 152 100.0
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 8.8e-44 180.6 157 69.4
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 2.0e-43 179.5 154 72.7
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 8.2e-42 174.1 157 68.2
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 1.1e-41 173.7 156 69.9
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 1.4e-41 173.3 156 71.2
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 4.1e-41 171.8 157 69.4
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 3.5e-40 168.7 156 68.6
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 3.5e-40 168.7 157 68.8
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 5.9e-40 167.9 153 70.6
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 1.0e-39 167.2 156 68.6
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 2.9e-39 165.6 158 66.5
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 2.9e-39 165.6 158 66.5
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 6.5e-39 164.5 152 68.4
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 1.5e-38 163.3 154 68.8
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 3.2e-38 162.2 154 68.8
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 1.2e-37 160.2 154 68.2
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 2.7e-37 159.1 156 64.1
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 3.6e-37 158.7 156 66.7
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 3.6e-37 158.7 152 66.4
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 4.7e-37 158.3 159 62.9
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 6.1e-37 157.9 136 72.1
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 6.1e-37 157.9 117 82.1
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 8.0e-37 157.5 156 66.7
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 4.0e-36 155.2 115 80.0
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 5.2e-36 154.8 128 70.3
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 6.7e-36 154.5 160 63.8
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 2.0e-35 152.9 156 66.0
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 4.4e-35 151.8 157 64.3
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 7.5e-35 151.0 152 65.1
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 9.7e-35 150.6 155 63.2
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 9.7e-35 150.6 153 64.1
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 9.7e-35 150.6 150 64.0
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 1.3e-34 150.2 154 65.6
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 1.3e-34 150.2 153 65.4
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 1.3e-34 150.2 156 64.7
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 1.7e-34 149.8 155 65.8
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 2.2e-34 149.4 103 84.5
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 4.8e-34 148.3 151 64.9
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 1.1e-33 147.1 104 83.7
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 1.1e-33 147.1 152 64.5
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 1.1e-33 147.1 155 65.8
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 1.4e-33 146.7 108 81.5
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 1.8e-33 146.4 152 64.5
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 1.8e-33 146.4 152 64.5
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 4.1e-33 145.2 152 63.8
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 5.3e-33 144.8 152 63.8
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 5.3e-33 144.8 152 63.8
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 5.3e-33 144.8 147 63.3
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 7.0e-33 144.4 147 61.2
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 9.1e-33 144.1 152 65.8
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 1.2e-32 143.7 103 65.0
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 1.6e-32 143.3 153 62.1
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 1.6e-32 143.3 149 62.4
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 2.0e-32 142.9 107 78.5
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 2.7e-32 142.5 155 61.9
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 5.9e-32 141.4 103 79.6
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 7.7e-32 141.0 151 61.6
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 1.3e-31 140.2 100 84.0
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 1.7e-31 139.8 109 78.0
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 2.2e-31 139.4 153 61.4
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 2.2e-31 139.4 145 64.1
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 2.9e-31 139.0 100 82.0
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 5.0e-31 138.3 153 60.1
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 5.0e-31 138.3 100 83.0
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 6.5e-31 137.9 121 61.2
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 8.5e-31 137.5 150 60.0
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 8.5e-31 137.5 150 61.3
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 8.5e-31 137.5 114 74.6
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 1.1e-30 137.1 113 76.1
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 1.5e-30 136.7 106 77.4
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 1.5e-30 136.7 106 77.4
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 1.9e-30 136.3 142 62.0
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 3.2e-30 135.6 100 83.0
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 3.2e-30 135.6 153 58.8
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 4.2e-30 135.2 131 67.9
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 5.5e-30 134.8 104 78.8
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 7.2e-30 134.4 98 82.7
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 7.2e-30 134.4 103 80.6
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 1.6e-29 133.3 129 68.2
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 3.6e-29 132.1 156 57.7
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 6.1e-29 131.3 154 58.4
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 1.0e-28 130.6 99 79.8
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 1.4e-28 130.2 154 58.4
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 1.4e-28 130.2 106 76.4
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 3.0e-28 129.0 123 67.5
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 4.0e-28 128.6 101 77.2
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 4.0e-28 128.6 114 71.9
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 1.2e-27 127.1 150 58.0
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 5.7e-27 124.8 103 70.9
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 5.7e-27 124.8 103 70.9
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 7.5e-27 124.4 98 77.6
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 9.8e-27 124.0 189 53.4
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 3.7e-26 122.1 94 80.9
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 4.8e-26 121.7 81 67.9
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 3.1e-25 119.0 80 87.5
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 2.0e-24 116.3 90 76.7
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 2.9e-23 112.5 85 78.8
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 3.8e-23 112.1 145 54.5
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 5.0e-23 111.7 75 90.7
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 1.2e-21 107.1 75 84.0
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 1.6e-21 106.7 108 63.0
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 2.1e-21 106.3 75 82.7
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 1.8e-20 103.2 83 72.3
Haze_21370 Corylus avellana HOM05D007253 ORTHO05D009055 1.4e-17 93.6 75 60.0
Cfa013009 Carpinus fangiana HOM05D018710 ORTHO05D009055 1.8e-17 93.2 76 60.5
Gohir.A05G061100 Gossypium hirsutum HOM05D007253 ORTHO05D009055 7.0e-17 91.3 94 54.3
QL02p017999 Quercus lobata HOM05D007253 ORTHO05D009055 7.8e-16 87.8 73 61.6


User provided reference genes

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