Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G232900 Carya illinoinensis HOM05D007019 ORTHO05D008398 1.9e-273 945.3 496 100.0
Cfa013011 Carpinus fangiana HOM05D007019 ORTHO05D008398 2.2e-224 782.3 500 83.8
QL02p018053 Quercus lobata HOM05D007019 ORTHO05D008398 1.0e-210 736.9 496 79.2
Manes.16G132200 Manihot esculenta HOM05D007019 ORTHO05D008398 1.4e-210 736.5 497 78.3
Prupe.1G396900 Prunus persica HOM05D007019 ORTHO05D008398 1.6e-203 713.0 500 76.2
Lalb_Chr15g0081591 Lupinus albus HOM05D007019 ORTHO05D008398 8.5e-197 690.6 496 74.2
Atru.chr7.2574 Acer truncatum HOM05D007019 ORTHO05D008398 1.5e-196 689.9 494 73.5
Lj6g0025581 Lotus japonicus HOM05D007019 ORTHO05D008398 3.2e-196 688.7 498 73.3
Eucgr.C04032 Eucalyptus grandis HOM05D007019 ORTHO05D008398 9.4e-196 687.2 494 73.1
RcHm_v2.0_Chr6g0299181 Rosa chinensis HOM05D007019 ORTHO05D008398 1.2e-195 686.8 496 74.0
FvH4_2g41350 Fragaria vesca HOM05D007019 ORTHO05D008398 1.6e-195 686.4 497 73.2
arahy.Tifrunner.gnm1.ann1.MG10WM Arachis hypogaea HOM05D007019 ORTHO05D008398 1.4e-194 683.3 497 73.2
Hma1.2p1_0737F.1_g210790 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 2.3e-194 682.6 500 73.0
arahy.Tifrunner.gnm1.ann1.SS16UG Arachis hypogaea HOM05D007019 ORTHO05D008398 4.0e-194 681.8 497 73.2
Potri.018G016200 Populus trichocarpa HOM05D007019 ORTHO05D008398 6.8e-194 681.0 494 72.3
TWI32G0429 Tripterygium wilfordii HOM05D007019 ORTHO05D008398 6.8e-194 681.0 497 72.2
Lj7A737G40 Lonicera japonica HOM05D007019 ORTHO05D008398 7.5e-193 677.6 510 72.2
CANSAT25G0065 Cannabis sativa HOM05D007019 ORTHO05D008398 4.8e-192 674.9 497 72.2
Glyma.18G091000 Glycine max HOM05D007019 ORTHO05D008398 4.1e-191 671.8 496 71.4
Gorai.009G064200 Gossypium raimondii HOM05D007019 ORTHO05D008398 2.0e-190 669.5 499 71.5
Thecc.09G013400 Theobroma cacao HOM05D007019 ORTHO05D008398 5.9e-190 667.9 500 71.2
Duzib168G1437 Durio zibethinus HOM05D007019 ORTHO05D008398 7.7e-190 667.5 502 71.7
CSS0016918 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 3.8e-189 665.2 497 70.8
CSS0023374 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 3.8e-189 665.2 497 70.8
DCAR_003030 Daucus carota HOM05D007019 ORTHO05D008398 1.5e-188 663.3 496 70.6
Psat5g174160 Pisum sativum HOM05D007019 ORTHO05D008398 1.6e-187 659.8 497 69.2
Actinidia14141 Actinidia chinensis HOM05D007019 ORTHO05D008398 2.7e-187 659.1 497 69.6
Rhsim02G0217600 Rhododendron simsii HOM05D007019 ORTHO05D008398 4.7e-187 658.3 496 71.4
FAN27G2994 Fragaria x ananassa HOM05D007019 ORTHO05D008398 1.0e-186 657.1 489 71.8
Glyma.08G321000 Glycine max HOM05D007019 ORTHO05D008398 1.8e-186 656.4 499 70.1
COL.COLO4_18972 Corchorus olitorius HOM05D007019 ORTHO05D008398 2.3e-186 656.0 501 69.7
Ciclev10008089m.g Citrus clementina HOM05D007019 ORTHO05D008398 6.8e-186 654.4 498 68.9
PGR044G2245 Punica granatum HOM05D007019 ORTHO05D008398 3.7e-184 648.7 500 70.0
MELO3C011312.2 Cucumis melo HOM05D007019 ORTHO05D008398 8.3e-184 647.5 500 70.0
Gohir.D05G063200 Gossypium hirsutum HOM05D007019 ORTHO05D008398 8.3e-184 647.5 499 69.7
Cc00_g05220 Coffea canephora HOM05D007019 ORTHO05D008398 3.1e-183 645.6 494 69.4
Gohir.A05G061000 Gossypium hirsutum HOM05D007019 ORTHO05D008398 7.0e-183 644.4 499 69.5
ClCG08G013800 Citrullus lanatus HOM05D007019 ORTHO05D008398 2.0e-182 642.9 500 70.4
MSTRG.1627 Avicennia marina HOM05D007019 ORTHO05D008398 5.9e-182 641.3 495 68.5
VMungo0540G1233 Vigna mungo HOM05D007019 ORTHO05D008398 2.9e-181 639.0 499 68.7
Nn6g33490 Nelumbo nucifera HOM05D007019 ORTHO05D008398 8.6e-181 637.5 514 68.7
CsaV3_2G032590 Cucumis sativus L. HOM05D007019 ORTHO05D008398 3.3e-180 635.6 499 69.1
Oeu021907.1 Olea europaea HOM05D007019 ORTHO05D008398 9.5e-180 634.0 495 68.3
Medtr3g053700 Medicago truncatula HOM05D007019 ORTHO05D008398 1.2e-179 633.6 496 67.5
Sed0002524 Sechium edule HOM05D007019 ORTHO05D008398 1.6e-179 633.3 505 68.1
Phvul.006G047900 Phaseolus vulgaris HOM05D007019 ORTHO05D008398 4.0e-178 628.6 499 67.7
Sabra18G0019700 Salix brachista HOM05D007019 ORTHO05D008398 1.5e-177 626.7 523 65.6
MBI14_g16432_MAGBIO Magnolia biondii HOM05D007019 ORTHO05D008398 7.5e-177 624.4 505 68.5
FAN15G0718 Fragaria x ananassa HOM05D007019 ORTHO05D008398 1.4e-175 620.2 516 67.2
Solyc08g068820.3 Solanum lycopersicum HOM05D007019 ORTHO05D008398 7.0e-175 617.8 497 66.0
TPR.G32253 Trifolium pratense HOM05D007019 ORTHO05D008398 7.0e-175 617.8 497 65.6
Migut.E01445 Erythranthe guttata HOM05D007019 ORTHO05D008398 2.0e-174 616.3 496 66.3
PGSC0003DMG400014784 Solanum tuberosum HOM05D007019 ORTHO05D008398 1.3e-173 613.6 497 64.6
Ca_26389_v3 Cicer arietinum L. HOM05D007019 ORTHO05D008398 1.7e-173 613.2 496 66.3
Aqoxy7G03288 Aquilegia oxysepala HOM05D007019 ORTHO05D008398 6.6e-173 611.3 500 65.6
HanXRQChr03g0084841 Helianthus annuus HOM05D007019 ORTHO05D008398 2.3e-170 602.8 518 63.7
PSO731G0070 Papaver somniferum HOM05D007019 ORTHO05D008398 4.4e-169 598.6 507 65.5
unitig_46.g18223 Utricularia gibba HOM05D007019 ORTHO05D008398 3.7e-168 595.5 494 64.2
Hund25606 Selenicereus undatus HOM05D007019 ORTHO05D008398 8.3e-168 594.3 522 63.0
THA.LOC104819948 Tarenaya hassleriana HOM05D007019 ORTHO05D008398 8.3e-168 594.3 517 62.3
PSO210G0129 Papaver somniferum HOM05D007019 ORTHO05D008398 4.1e-167 592.0 513 64.9
Cpa.g.sc148.46 Carica papaya HOM05D007019 ORTHO05D008398 1.3e-165 587.0 501 66.1
CAN.G273.24 Capsicum annuum HOM05D007019 ORTHO05D008398 3.0e-165 585.9 497 62.4
EL10Ac2g02454 Beta vulgaris HOM05D007019 ORTHO05D008398 4.3e-164 582.0 551 60.4
Sp4g03850 Schrenkiella parvula HOM05D007019 ORTHO05D008398 2.3e-162 576.2 510 62.9
CDE04G0815 Ceratophyllum demersum HOM05D007019 ORTHO05D008398 5.2e-162 575.1 510 62.4
Carub.0004s0445 Capsella rubella HOM05D007019 ORTHO05D008398 4.4e-161 572.0 509 62.1
Lsat_1_v5_gn_6_78060 Lactuca sativa HOM05D007019 ORTHO05D008398 9.8e-161 570.9 503 63.6
ATR0580G102 Amborella trichopoda HOM05D007019 ORTHO05D008398 4.9e-160 568.5 510 60.6
Aa31LG7G11570 Aethionema arabicum HOM05D007019 ORTHO05D008398 2.4e-159 566.2 508 62.0
ECA240G4302 Erigeron canadensis HOM05D007019 ORTHO05D008398 2.4e-159 566.2 515 60.2
CARHR294580 Cardamine hirsuta HOM05D007019 ORTHO05D008398 1.3e-157 560.5 516 61.4
SGA_v2.0_scaffold169G38600 Striga asiatica HOM05D007019 ORTHO05D008398 1.7e-157 560.1 508 62.6
Sc23g0006120 Simmondsia chinensis HOM05D007019 ORTHO05D008398 2.3e-157 559.7 518 62.4
Thhalv10000137m.g Eutrema salsugineum HOM05D007019 ORTHO05D008398 4.7e-155 552.0 512 61.3
AT2G24830 Arabidopsis thaliana HOM05D007019 ORTHO05D008398 1.1e-154 550.8 510 60.8
BraA09t41004Z Brassica rapa HOM05D007019 ORTHO05D008398 2.0e-153 546.6 513 62.8
AUR62032443 Chenopodium quinoa HOM05D007019 ORTHO05D008398 3.8e-152 542.3 526 59.3
Nitab4.5_0000406g0110 Nicotiana tabacum HOM05D007019 ORTHO05D008398 5.4e-151 538.5 494 60.3
A09p56090 Brassica napus HOM05D007019 ORTHO05D008398 9.2e-151 537.7 512 61.5
A09p56030 Brassica napus HOM05D007019 ORTHO05D008398 2.7e-150 536.2 510 61.2
Zm00001eb257650 Zea mays HOM05D007019 ORTHO05D008398 4.6e-150 535.4 502 61.2
AUR62024776 Chenopodium quinoa HOM05D007019 ORTHO05D008398 8.6e-149 531.2 539 58.1
C08p39020 Brassica napus HOM05D007019 ORTHO05D008398 1.4e-146 523.9 513 59.6
BolC8t51475H Brassica oleracea HOM05D007019 ORTHO05D008398 1.4e-146 523.9 513 59.5
Sopen08g022560 Solanum pennellii HOM05D007019 ORTHO05D008398 1.8e-146 523.5 405 65.7
Nitab4.5_0012106g0030 Nicotiana tabacum HOM05D007019 ORTHO05D008398 4.4e-145 518.8 494 60.7
HPP92_010745 Vanilla planifolia HOM05D007019 ORTHO05D008398 1.3e-144 517.3 508 57.3
AL4G15870 Arabidopsis lyrata HOM05D007019 ORTHO05D008398 3.8e-144 515.8 510 57.3
BcaC07g40903 Brassica carinata HOM05D007019 ORTHO05D008398 2.1e-139 500.0 500 58.6
MD08G1051900 Malus domestica HOM05D007019 ORTHO05D008398 4.0e-138 495.7 359 74.9
vmacro11274 Vaccinium macrocarpon HOM05D007019 ORTHO05D008398 9.0e-138 494.6 495 59.6
SEGI_04420 Sequoiadendron giganteum HOM05D007019 ORTHO05D008398 2.4e-135 486.5 513 55.8
TAR636G0280 Trochodendron aralioides HOM05D007019 ORTHO05D008398 2.3e-133 479.9 345 72.5
Dinv03401 Davidia involucrata HOM05D007019 ORTHO05D008398 5.6e-132 475.3 364 73.1
Hma1.2p1_0737F.1_g210800 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 4.3e-124 449.1 330 73.0
Mapoly0067s0020 Marchantia polymorpha HOM05D007019 ORTHO05D008398 1.9e-108 397.1 513 47.8
Pp3c21_5730 Physcomitrium patens HOM05D007019 ORTHO05D008398 7.7e-105 385.2 516 45.0
SMO116G0382 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 1.1e-103 381.3 503 49.1
Dinv10229 Davidia involucrata HOM05D007019 ORTHO05D008398 5.3e-98 362.5 353 61.8
SHI21092 Sapria himalayana HOM05D007019 ORTHO05D008398 1.0e-96 358.2 579 41.5
GSVIVG01036005001 Vitis vinifera HOM05D007019 ORTHO05D008398 1.5e-76 291.2 189 77.2
AagrBONN_evm.TU.Sc2ySwM_117.1463 Anthoceros agrestis HOM05D007019 ORTHO05D008398 4.5e-65 253.1 363 43.3
CBR_g30106 Chara braunii HOM05D007019 ORTHO05D008398 6.8e-61 239.2 561 36.5
SalBow6G1623 Salvia bowleyana HOM05D007019 ORTHO05D008398 7.3e-47 192.6 190 57.4
Peaxi162Scf01419g00115 Petunia axillaris HOM05D007019 ORTHO05D008398 9.5e-39 165.6 146 57.5
SMO116G0105 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 1.5e-36 158.3 325 39.1
SMO269G0003 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 3.4e-28 130.6 327 35.8
Os02g0793000 Oryza sativa ssp. japonica HOM05D007019 ORTHO05D008398 5.8e-28 129.8 108 62.0
AagrBONN_evm.TU.Sc2ySwM_117.1462 Anthoceros agrestis HOM05D007019 ORTHO05D008398 1.7e-19 101.7 148 43.9
Nn2g12259 Nelumbo nucifera HOM05D004574 ORTHO05D005612 7.4e-07 59.7 71 42.3
CSS0028433 Camellia sinensis var. sinensis HOM05D004574 ORTHO05D005612 9.6e-07 59.3 79 41.8
Actinidia04251 Actinidia chinensis HOM05D004574 ORTHO05D005612 2.1e-06 58.2 76 46.1
TAR636G2565 Trochodendron aralioides HOM05D007019 ORTHO05D008398 2.1e-06 58.2 40 80.0
Oeu040778.1 Olea europaea HOM05D004574 ORTHO05D005612 6.2e-06 56.6 68 47.1


User provided reference genes

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