Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G216000 Carya illinoinensis HOM05D010003 ORTHO05D000001 8.9e-71 270.4 160 100.0
CiPaw.10G102300 Carya illinoinensis HOM05D000006 ORTHO05D000001 1.6e-56 223.0 163 78.5
CiPaw.06G091700 Carya illinoinensis HOM05D000006 ORTHO05D000001 3.6e-56 221.9 165 73.3
CiPaw.03G261000 Carya illinoinensis HOM05D000006 ORTHO05D000001 4.0e-55 218.4 163 72.4
CiPaw.16G041200 Carya illinoinensis HOM05D000006 ORTHO05D000001 5.2e-55 218.0 163 77.9
CiPaw.16G044200 Carya illinoinensis HOM05D000006 ORTHO05D000001 9.9e-54 213.8 163 77.3
CiPaw.01G148100 Carya illinoinensis HOM05D000006 ORTHO05D000001 2.7e-51 205.7 163 75.5
CiPaw.06G068400 Carya illinoinensis HOM05D000006 ORTHO05D000001 5.6e-49 198.0 156 75.0
CiPaw.06G034700 Carya illinoinensis HOM05D000006 ORTHO05D000001 5.1e-42 174.9 163 66.9
CiPaw.08G179300 Carya illinoinensis HOM05D000006 ORTHO05D000001 4.5e-30 135.2 90 75.6
CiPaw.03G219700 Carya illinoinensis HOM05D010003 ORTHO05D000001 2.2e-29 132.9 123 60.2
CiPaw.03G110400 Carya illinoinensis HOM05D010003 ORTHO05D000001 2.7e-27 125.9 84 75.0
MELO3C024084.2 Cucumis melo HOM05D011212 ORTHO05D013315 3.5e-19 99.0 162 40.7
Manes.18G120350 Manihot esculenta HOM05D000006 ORTHO05D000001 4.3e-17 92.0 158 38.0
Manes.14G166140 Manihot esculenta HOM05D010003 ORTHO05D000001 9.6e-17 90.9 162 35.2
Manes.17G033205 Manihot esculenta HOM05D000006 ORTHO05D000001 9.6e-17 90.9 155 37.4
Manes.16G039802 Manihot esculenta HOM05D010003 ORTHO05D000001 4.8e-16 88.6 162 35.8
ClCG07G007380 Citrullus lanatus HOM05D000006 ORTHO05D000001 8.2e-16 87.8 166 35.5
Manes.14G166180 Manihot esculenta HOM05D010003 ORTHO05D000001 8.2e-16 87.8 162 33.3
Manes.08G063666 Manihot esculenta HOM05D000006 ORTHO05D000001 9.0e-15 84.3 155 36.1
Manes.17G026196 Manihot esculenta HOM05D000006 ORTHO05D000001 3.4e-14 82.4 162 33.3
Manes.02G125950 Manihot esculenta HOM05D000006 ORTHO05D000001 5.8e-14 81.6 146 36.3
Manes.10G076205 Manihot esculenta HOM05D000006 ORTHO05D000001 5.8e-14 81.6 144 34.7
Manes.15G182401 Manihot esculenta HOM05D000006 ORTHO05D000001 5.8e-14 81.6 144 34.7
Manes.12G103911 Manihot esculenta HOM05D000006 ORTHO05D000001 1.0e-13 80.9 155 34.2
CANSAT01G2369 Cannabis sativa HOM05D000006 ORTHO05D000001 1.3e-13 80.5 160 36.2
CANSAT64G0321 Cannabis sativa HOM05D000006 ORTHO05D000001 3.8e-13 79.0 164 35.4
Ca_06821_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 4.9e-13 78.6 178 35.4
Ca_07385_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.1e-12 77.4 179 35.2
CANSAT01G2460 Cannabis sativa HOM05D000006 ORTHO05D000001 1.4e-12 77.0 163 35.0
Ca_02500_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 2.5e-12 76.3 179 34.1
Ca_27860_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 4.2e-12 75.5 179 33.5
CANSAT11G2182 Cannabis sativa HOM05D000006 ORTHO05D000001 5.5e-12 75.1 163 34.4
CANSAT21G0171 Cannabis sativa HOM05D000006 ORTHO05D000001 5.5e-12 75.1 163 35.6
TWI77G0097 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 5.5e-12 75.1 167 34.7
Duzib168G1730 Durio zibethinus HOM05D000006 ORTHO05D000001 7.1e-12 74.7 167 36.5
Ca_03879_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000001 9.3e-12 74.3 179 33.5
Ca_20347_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000001 9.3e-12 74.3 178 34.8
Ca_28113_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 9.3e-12 74.3 179 33.5
Manes.16G053115 Manihot esculenta HOM05D010003 ORTHO05D000001 1.2e-11 73.9 145 31.7
TWI08G0001 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 2.1e-11 73.2 165 34.5
TWI29G0001 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 2.1e-11 73.2 165 34.5
TWI72G0001 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 2.1e-11 73.2 165 34.5
TWI73G1285 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 2.1e-11 73.2 164 35.4
TWI84G0001 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 2.1e-11 73.2 165 34.5
Ca_08009_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 2.7e-11 72.8 178 36.5
Ca_11977_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000001 3.5e-11 72.4 179 33.0
TWI81G1093 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 6.1e-11 71.6 165 33.9
Ca_27695_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000001 1.0e-10 70.9 179 33.0
Manes.02G221966 Manihot esculenta HOM05D010003 ORTHO05D000001 1.3e-10 70.5 138 34.8
Ca_27908_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.8e-10 70.1 176 31.2
Manes.15G017450 Manihot esculenta HOM05D010003 ORTHO05D000001 1.8e-10 70.1 135 35.6
Atru.chr12.2495 Acer truncatum HOM05D000006 ORTHO05D000001 2.3e-10 69.7 117 39.3
Ca_27622_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 3.0e-10 69.3 179 33.5
Ca_27693_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 3.9e-10 68.9 179 33.5
Ca_28278_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 3.9e-10 68.9 178 33.7
TWI07G0001 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 3.9e-10 68.9 165 33.3
CiPaw.16G057200 Carya illinoinensis HOM05D000006 ORTHO05D000001 6.7e-10 68.2 51 66.7
Oeu021271.1 Olea europaea HOM05D000006 ORTHO05D000001 6.7e-10 68.2 164 31.7
TPR.G14373 Trifolium pratense HOM05D000006 ORTHO05D000001 6.7e-10 68.2 169 33.1
TWI23G1018 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 6.7e-10 68.2 167 35.9
Manes.07G085550 Manihot esculenta HOM05D010003 ORTHO05D000001 8.7e-10 67.8 128 34.4
Ca_27710_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.1e-09 67.4 122 37.7
MELO3C031908.2 Cucumis melo HOM05D011212 ORTHO05D013315 1.5e-09 67.0 140 36.4
Manes.04G060401 Manihot esculenta HOM05D010003 ORTHO05D000001 1.5e-09 67.0 128 35.2
Ca_19749_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.9e-09 66.6 178 33.1
Manes.05G118952 Manihot esculenta HOM05D010003 ORTHO05D000001 1.9e-09 66.6 130 31.5
Ca_27838_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 2.5e-09 66.2 162 33.3
Manes.16G044501 Manihot esculenta HOM05D010003 ORTHO05D000001 3.3e-09 65.9 89 40.4
Actinidia09879 Actinidia chinensis HOM05D000006 ORTHO05D000001 4.3e-09 65.5 155 36.8
Ca_27013_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000001 4.3e-09 65.5 179 31.8
Ca_06976_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 7.4e-09 64.7 174 32.2
Ca_11996_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 9.7e-09 64.3 149 34.9
Manes.10G085602 Manihot esculenta HOM05D027326 ORTHO05D000001 9.7e-09 64.3 166 34.9
TPR.G10854 Trifolium pratense HOM05D000006 ORTHO05D000001 9.7e-09 64.3 173 30.1
Ca_20124_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.3e-08 63.9 168 33.3
Ca_23375_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.3e-08 63.9 169 35.5
Manes.16G069201 Manihot esculenta HOM05D010003 ORTHO05D000001 1.3e-08 63.9 86 40.7
Phvul.006G014800 Phaseolus vulgaris HOM05D000006 ORTHO05D000001 1.3e-08 63.9 176 29.5
Ca_02458_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.6e-08 63.5 169 33.7
Ca_20724_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.6e-08 63.5 122 36.1
Oeu057440.1 Olea europaea HOM05D000006 ORTHO05D000001 1.6e-08 63.5 163 29.4
Thecc.09G212600 Theobroma cacao HOM05D000006 ORTHO05D000001 1.6e-08 63.5 180 28.3
Ca_01743_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 2.2e-08 63.2 170 30.6
Manes.07G074101 Manihot esculenta HOM05D010003 ORTHO05D000001 2.2e-08 63.2 162 34.6
Ca_27807_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 2.8e-08 62.8 185 29.7
Ca_27553_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 3.7e-08 62.4 121 38.8
Ca_22884_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 6.3e-08 61.6 160 34.4
Ca_23500_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000001 6.3e-08 61.6 121 38.8
Ca_27268_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 8.2e-08 61.2 160 33.8
Ca_27300_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 8.2e-08 61.2 122 33.6
Ca_27205_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.1e-07 60.8 165 32.7
Thecc.05G127300 Theobroma cacao HOM05D010003 ORTHO05D000001 1.1e-07 60.8 97 42.3
Ca_26539_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.4e-07 60.5 157 32.5
Ca_27343_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.4e-07 60.5 184 29.9
Ca_14002_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.8e-07 60.1 175 28.6
Manes.18G143201 Manihot esculenta HOM05D000006 ORTHO05D000001 1.8e-07 60.1 144 31.2
Ca_05540_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 2.4e-07 59.7 118 36.4
Thecc.09G203000 Theobroma cacao HOM05D000006 ORTHO05D000001 3.1e-07 59.3 82 43.9
Ca_19633_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 4.1e-07 58.9 179 30.2
Ca_27756_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000001 4.1e-07 58.9 168 32.1
Ca_07096_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 6.9e-07 58.2 167 29.3
Ca_11328_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 6.9e-07 58.2 121 36.4
MELO3C020194.2 Cucumis melo HOM05D011212 ORTHO05D013315 6.9e-07 58.2 131 34.4
Ca_19635_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 9.0e-07 57.8 179 28.5
CANSAT54G2669 Cannabis sativa HOM05D000006 ORTHO05D000001 1.2e-06 57.4 128 33.6
TWI82G0001 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 1.2e-06 57.4 157 31.2
TWI82G0002 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 1.2e-06 57.4 157 31.2
TWI82G0003 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 1.2e-06 57.4 157 31.2
Ca_04990_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.5e-06 57.0 144 35.4
Ca_02252_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 2.6e-06 56.2 165 31.5
Ca_26112_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 2.6e-06 56.2 171 28.7
Manes.17G026529 Manihot esculenta HOM05D010003 ORTHO05D000001 4.5e-06 55.5 89 37.1
Ca_12125_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000001 7.7e-06 54.7 178 34.3
TPR.G19193 Trifolium pratense HOM05D000006 ORTHO05D000001 7.7e-06 54.7 180 35.6


User provided reference genes

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