Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G214800 Carya illinoinensis HOM05D000880 ORTHO05D009684 1.4e-137 494.2 333 100.0
Cfa013251 Carpinus fangiana HOM05D000880 ORTHO05D008158 2.8e-93 347.1 330 80.6
QL12p024656 Quercus lobata HOM05D000880 ORTHO05D009684 1.5e-83 314.7 314 78.3
Haze_21694 Corylus avellana HOM05D000880 ORTHO05D009684 8.4e-66 255.8 273 79.1
MD08G1133900 Malus domestica HOM05D000880 ORTHO05D009684 4.6e-64 250.0 319 68.3
Prupe.1G462500 Prunus persica HOM05D000880 ORTHO05D009684 5.6e-62 243.0 321 65.4
Cpa.g.sc10.206 Carica papaya HOM05D000880 ORTHO05D009684 3.4e-59 233.8 332 63.6
Dinv15656 Davidia involucrata HOM05D000880 ORTHO05D009684 2.2e-58 231.1 319 65.2
FAN24G3119 Fragaria x ananassa HOM05D000880 ORTHO05D009684 4.6e-56 223.4 333 63.1
Atru.chr7.2671 Acer truncatum HOM05D000880 ORTHO05D009684 3.9e-55 220.3 333 58.0
RcHm_v2.0_Chr6g0312241 Rosa chinensis HOM05D000880 ORTHO05D009684 5.1e-55 219.9 334 63.8
Actinidia06447 Actinidia chinensis HOM05D000880 ORTHO05D009684 1.1e-54 218.8 314 64.6
FAN20G2124 Fragaria x ananassa HOM05D000880 ORTHO05D009684 1.9e-54 218.0 333 63.1
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 2.8e-53 214.2 327 59.9
arahy.Tifrunner.gnm1.ann1.CHY0RW Arachis hypogaea HOM05D000880 ORTHO05D009684 1.4e-52 211.8 327 59.9
Lalb_Chr03g0032741 Lupinus albus HOM05D000880 ORTHO05D009684 9.0e-52 209.1 317 60.6
Rhsim04G0217100 Rhododendron simsii HOM05D000880 ORTHO05D009684 2.6e-51 207.6 326 61.0
Manes.07G088100 Manihot esculenta HOM05D000880 ORTHO05D009684 3.2e-49 200.7 308 62.0
CSS0007644 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D009684 1.8e-47 194.9 300 63.0
Ciclev10007859m.g Citrus clementina HOM05D000880 ORTHO05D009684 5.1e-47 193.4 313 62.9
FvH4_2g30660 Fragaria vesca HOM05D000880 ORTHO05D009684 9.6e-46 189.1 279 65.9
vmacro08195 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 6.2e-45 186.4 315 60.6
Haze_10332 Corylus avellana HOM05D000880 ORTHO05D009684 8.2e-45 186.0 216 81.5
TAR626G1204 Trochodendron aralioides HOM05D000880 ORTHO05D009684 1.1e-44 185.7 296 64.9
FAN27G3148 Fragaria x ananassa HOM05D000880 ORTHO05D009684 4.0e-44 183.7 260 67.3
CANSAT78G1387 Cannabis sativa HOM05D000880 ORTHO05D009684 4.5e-43 180.3 320 59.4
Potri.018G004400 Populus trichocarpa HOM05D000880 ORTHO05D009684 5.8e-43 179.9 335 54.9
Lj6C69T3 Lonicera japonica HOM05D000880 ORTHO05D009684 2.5e-41 174.5 313 60.1
Lj4A910T18 Lonicera japonica HOM05D000880 ORTHO05D009684 4.6e-40 170.2 312 59.3
Phvul.011G207000 Phaseolus vulgaris HOM05D000880 ORTHO05D009684 1.8e-39 168.3 316 58.9
Ca_12883_v3 Cicer arietinum L. HOM05D000880 ORTHO05D009684 7.4e-38 162.9 268 54.5
Aqoxy5G01876 Aquilegia oxysepala HOM05D000880 ORTHO05D009684 2.8e-37 161.0 320 59.1
Nitab4.5_0000502g0180 Nicotiana tabacum HOM05D000880 ORTHO05D009684 2.8e-37 161.0 314 57.0
Thecc.09G004700 Theobroma cacao HOM05D000880 ORTHO05D009684 2.8e-37 161.0 179 49.2
ClCG08G012780 Citrullus lanatus HOM05D006422 ORTHO05D007992 1.1e-36 159.1 304 58.6
Nn8g39798 Nelumbo nucifera HOM05D000880 ORTHO05D009684 1.8e-36 158.3 301 58.5
Lj3g0007027 Lotus japonicus HOM05D000880 ORTHO05D009684 2.4e-36 157.9 324 43.8
Aa31LG10G9610 Aethionema arabicum HOM05D000880 ORTHO05D009684 6.9e-36 156.4 349 48.7
Cc08_g06370 Coffea canephora HOM05D000880 ORTHO05D009684 9.0e-36 156.0 319 58.0
VMungo1127G1257 Vigna mungo HOM05D000880 ORTHO05D009684 2.6e-35 154.5 244 68.9
Sabra18G0010100 Salix brachista HOM05D000880 ORTHO05D009684 3.4e-35 154.1 319 55.5
Sed0004667 Sechium edule HOM05D000880 ORTHO05D009684 5.9e-35 153.3 299 53.5
CsaV3_2G031530 Cucumis sativus L. HOM05D000880 ORTHO05D009684 7.7e-35 152.9 265 62.3
Solyc03g120070.4 Solanum lycopersicum HOM05D000880 ORTHO05D009684 7.7e-35 152.9 318 57.2
Psat6g031840 Pisum sativum HOM05D000880 ORTHO05D009684 2.2e-34 151.4 323 53.9
Sabra18G0001200 Salix brachista HOM05D000880 ORTHO05D009684 2.2e-34 151.4 318 55.3
PGR044G0315 Punica granatum HOM05D000880 ORTHO05D009684 2.9e-34 151.0 312 55.1
TPR.G12115 Trifolium pratense HOM05D000880 ORTHO05D009684 3.8e-34 150.6 319 50.5
MELO3C011202.2 Cucumis melo HOM05D000880 ORTHO05D009684 1.1e-33 149.1 304 57.6
CiPaw.15G081300 Carya illinoinensis HOM05D000880 ORTHO05D009684 1.4e-33 148.7 78 88.5
Glyma.13G197400 Glycine max HOM05D000880 ORTHO05D009684 1.4e-33 148.7 236 61.4
Hund04480 Selenicereus undatus HOM05D000880 ORTHO05D009684 2.5e-33 147.9 249 64.3
vmacro08192 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 5.5e-33 146.7 319 50.2
Aa31LG10G9680 Aethionema arabicum HOM05D000880 ORTHO05D009684 7.2e-33 146.4 353 51.6
Sopen03g038940 Solanum pennellii HOM05D000880 ORTHO05D009684 1.6e-32 145.2 318 56.0
PGSC0003DMG400005692 Solanum tuberosum HOM05D000880 ORTHO05D009684 7.9e-32 142.9 318 55.3
GSVIVG01003996001 Vitis vinifera HOM05D000880 ORTHO05D009684 1.0e-31 142.5 214 73.4
Medtr1g010020 Medicago truncatula HOM05D000880 ORTHO05D009684 1.7e-29 135.2 301 53.8
Thhalv10003880m.g Eutrema salsugineum HOM05D000880 ORTHO05D009684 2.8e-29 134.4 308 55.8
Peaxi162Scf00288g01016 Petunia axillaris HOM05D000880 ORTHO05D009684 2.4e-28 131.3 321 54.5
Sp2g22620 Schrenkiella parvula HOM05D000880 ORTHO05D009684 1.0e-26 125.9 311 55.6
Carub.0006s2268 Capsella rubella HOM05D000880 ORTHO05D009684 1.3e-26 125.6 309 55.3
CARHR188620 Cardamine hirsuta HOM05D000880 ORTHO05D009684 1.3e-26 125.6 308 55.5
A06p35600 Brassica napus HOM05D000880 ORTHO05D009684 2.2e-26 124.8 312 55.1
Migut.E01433 Erythranthe guttata HOM05D000880 ORTHO05D009684 3.8e-26 124.0 321 52.6
SGA_v2.0_scaffold121G33022 Striga asiatica HOM05D000880 ORTHO05D009684 3.8e-26 124.0 338 43.8
BraA06t26485Z Brassica rapa HOM05D000880 ORTHO05D009684 2.5e-25 121.3 316 54.4
C07p42940 Brassica napus HOM05D000880 ORTHO05D009684 3.2e-25 120.9 311 54.3
AT5G24830 Arabidopsis thaliana HOM05D000880 ORTHO05D009684 1.6e-24 118.6 306 55.2
BolC7t44823H Brassica oleracea HOM05D000880 ORTHO05D009684 2.7e-24 117.9 308 54.2
Glyma.15G236000 Glycine max HOM05D000880 ORTHO05D009684 2.3e-23 114.8 198 61.6
Eucgr.H00073 Eucalyptus grandis HOM05D000880 ORTHO05D009684 5.1e-23 113.6 310 51.0
MBI13_g01685_MAGBIO Magnolia biondii HOM05D000880 ORTHO05D001950 1.5e-22 112.1 156 41.0
Nitab4.5_0001956g0020 Nicotiana tabacum HOM05D000880 ORTHO05D009684 1.5e-22 112.1 254 59.1
SalBow8G2909 Salvia bowleyana HOM05D004918 ORTHO05D005706 1.5e-22 112.1 247 58.7
Lsat_1_v5_gn_5_33201 Lactuca sativa HOM05D000880 ORTHO05D009684 1.3e-21 109.0 169 39.6
MD15G1110300 Malus domestica HOM05D000880 ORTHO05D009684 2.8e-21 107.8 192 68.8
AL6G36470 Arabidopsis lyrata HOM05D000880 ORTHO05D009684 3.7e-21 107.5 312 52.9
Ah.02g121750 Amaranthus hybridus HOM05D000880 ORTHO05D009684 1.1e-20 105.9 234 61.1
Sc07g0001710 Simmondsia chinensis HOM05D000880 ORTHO05D009684 1.8e-20 105.1 116 44.8
ECA232G0576 Erigeron canadensis HOM05D000880 ORTHO05D009684 2.4e-20 104.8 116 46.6
Oeu040613.1 Olea europaea HOM05D000880 ORTHO05D009684 1.5e-19 102.1 165 41.8
EL10Ac6g15284 Beta vulgaris HOM05D000880 ORTHO05D009684 3.5e-19 100.9 225 61.8
AUR62017906 Chenopodium quinoa HOM05D000880 ORTHO05D009684 1.7e-18 98.6 229 49.3
HanXRQChr07g0202221 Helianthus annuus HOM05D000880 ORTHO05D009684 8.5e-18 96.3 175 37.7
MSTRG.13951 Avicennia marina HOM05D000880 ORTHO05D009684 1.5e-17 95.5 208 65.4
ECA236G3570 Erigeron canadensis HOM05D000705 ORTHO05D002970 2.5e-17 94.7 103 48.5
AUR62003593 Chenopodium quinoa HOM05D000880 ORTHO05D009684 9.4e-17 92.8 216 51.9
BcaNung01260 Brassica carinata HOM05D000880 ORTHO05D009684 1.4e-15 89.0 177 35.6
CSS0003109 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D009684 1.3e-13 82.4 96 45.8
PSO017G1147 Papaver somniferum HOM05D000880 ORTHO05D001950 1.7e-13 82.0 150 36.7
DCAR_017077 Daucus carota HOM05D000880 ORTHO05D009684 1.6e-11 75.5 68 54.4
Cpa.g.sc10.208 Carica papaya HOM05D000880 ORTHO05D009684 5.5e-09 67.0 184 70.7
HPP92_017364 Vanilla planifolia HOM05D003382 ORTHO05D003930 5.7e-06 57.0 177 25.4


User provided reference genes

Program Settings