Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G208400 Carya illinoinensis HOM05D006214 ORTHO05D007723 2.7e-97 358.6 173 100.0
QL12p026136 Quercus lobata HOM05D006214 ORTHO05D007723 8.1e-86 320.5 166 91.6
CiPaw.08G022500 Carya illinoinensis HOM05D006214 ORTHO05D007723 2.0e-84 315.8 167 89.2
Haze_21823 Corylus avellana HOM05D006214 ORTHO05D007723 9.9e-84 313.5 170 89.4
Cfa013332 Carpinus fangiana HOM05D006214 ORTHO05D007723 5.4e-82 307.8 170 87.6
Thecc.09G038200 Theobroma cacao HOM05D006214 ORTHO05D007723 1.2e-81 306.6 164 89.0
COL.COLO4_18710 Corchorus olitorius HOM05D006214 ORTHO05D007723 8.7e-80 300.4 169 84.6
Dinv30243 Davidia involucrata HOM05D006214 ORTHO05D007723 8.7e-80 300.4 164 85.4
TWI34G1412 Tripterygium wilfordii HOM05D006214 ORTHO05D007723 8.7e-80 300.4 164 85.4
Duzib150G0825 Durio zibethinus HOM05D006214 ORTHO05D007723 3.3e-79 298.5 165 87.3
Aqoxy7G01701 Aquilegia oxysepala HOM05D006214 ORTHO05D007723 5.6e-79 297.7 165 86.7
AUR62032401 Chenopodium quinoa HOM05D006214 ORTHO05D007723 7.3e-79 297.4 164 84.1
Oeu011261.1 Olea europaea HOM05D006214 ORTHO05D007723 2.1e-78 295.8 164 83.5
GSVIVG01035713001 Vitis vinifera HOM05D006214 ORTHO05D007723 3.6e-78 295.0 164 85.4
Sed0020806 Sechium edule HOM05D006214 ORTHO05D007723 6.2e-78 294.3 162 85.8
Oeu014655.1 Olea europaea HOM05D006214 ORTHO05D007723 2.4e-77 292.4 164 84.8
MELO3C011160.2 Cucumis melo HOM05D006214 ORTHO05D007723 3.1e-77 292.0 162 84.6
Gohir.D13G192400 Gossypium hirsutum HOM05D006214 ORTHO05D007723 3.1e-77 292.0 170 82.4
Cpa.g.sc205.8 Carica papaya HOM05D006214 ORTHO05D007723 4.0e-77 291.6 164 83.5
Gorai.013G218300 Gossypium raimondii HOM05D006214 ORTHO05D007723 4.0e-77 291.6 170 82.4
PGR044G2495 Punica granatum HOM05D006214 ORTHO05D007723 4.0e-77 291.6 165 84.2
Nn8g39214 Nelumbo nucifera HOM05D006214 ORTHO05D007723 5.3e-77 291.2 164 82.9
Potri.006G244300 Populus trichocarpa HOM05D006214 ORTHO05D007723 5.3e-77 291.2 164 84.1
Sc06g0000690 Simmondsia chinensis HOM05D006214 ORTHO05D007723 5.3e-77 291.2 161 84.5
PSO782G3114 Papaver somniferum HOM05D006214 ORTHO05D007723 6.9e-77 290.8 165 84.2
CSS0015630 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 9.0e-77 290.4 164 83.5
CSS0049547 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 9.0e-77 290.4 164 83.5
CsaV3_2G031100 Cucumis sativus L. HOM05D006214 ORTHO05D007723 1.2e-76 290.0 162 84.6
Lsat_1_v5_gn_6_11341 Lactuca sativa HOM05D006214 ORTHO05D007723 1.2e-76 290.0 165 83.6
Ciclev10009715m.g Citrus clementina HOM05D006214 ORTHO05D007723 1.5e-76 289.7 164 83.5
PSO063G0005 Papaver somniferum HOM05D006214 ORTHO05D007723 1.5e-76 289.7 165 84.2
Manes.03G064300 Manihot esculenta HOM05D006214 ORTHO05D007723 2.6e-76 288.9 164 82.9
Nitab4.5_0002393g0090 Nicotiana tabacum HOM05D006214 ORTHO05D007723 2.6e-76 288.9 164 82.3
Hma1.2p1_0003F.1_g003500 Hydrangea macrophylla HOM05D006214 ORTHO05D007723 3.4e-76 288.5 164 82.3
Prupe.1G454300 Prunus persica HOM05D006214 ORTHO05D007723 3.4e-76 288.5 169 81.7
Nitab4.5_0000250g0190 Nicotiana tabacum HOM05D006214 ORTHO05D007723 4.4e-76 288.1 164 82.3
CANSAT25G2048 Cannabis sativa HOM05D006214 ORTHO05D007723 9.9e-76 287.0 166 83.7
Eucgr.C02883 Eucalyptus grandis HOM05D006214 ORTHO05D007723 9.9e-76 287.0 164 82.3
Hund25645 Selenicereus undatus HOM05D006214 ORTHO05D007723 1.7e-75 286.2 164 82.3
HanXRQChr07g0192221 Helianthus annuus HOM05D006214 ORTHO05D007723 2.9e-75 285.4 165 81.8
Lalb_Chr22g0361001 Lupinus albus HOM05D006214 ORTHO05D007723 2.9e-75 285.4 155 86.5
PGSC0003DMG400014492 Solanum tuberosum HOM05D006214 ORTHO05D007723 6.4e-75 284.3 164 81.1
Actinidia31216 Actinidia chinensis HOM05D006214 ORTHO05D007723 1.1e-74 283.5 164 82.9
Cc08_g08530 Coffea canephora HOM05D006214 ORTHO05D007723 1.4e-74 283.1 161 83.9
Migut.A00249 Erythranthe guttata HOM05D006214 ORTHO05D007723 1.4e-74 283.1 163 81.6
Solyc08g068070.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 1.4e-74 283.1 164 80.5
DCAR_001036 Daucus carota HOM05D006214 ORTHO05D007723 3.2e-74 282.0 164 82.9
Medtr1g008700 Medicago truncatula HOM05D006214 ORTHO05D007723 4.2e-74 281.6 164 81.1
Sp7g30450 Schrenkiella parvula HOM05D006214 ORTHO05D007723 1.2e-73 280.0 168 80.4
Thhalv10026389m.g Eutrema salsugineum HOM05D006214 ORTHO05D007723 4.6e-73 278.1 168 79.8
THA.LOC104803814 Tarenaya hassleriana HOM05D006214 ORTHO05D007723 4.6e-73 278.1 167 79.0
Rhsim02G0184100 Rhododendron simsii HOM05D006214 ORTHO05D007723 6.0e-73 277.7 159 82.4
RcHm_v2.0_Chr6g0305591 Rosa chinensis HOM05D006214 ORTHO05D007723 1.3e-72 276.6 160 83.8
Actinidia13304 Actinidia chinensis HOM05D006214 ORTHO05D007723 3.9e-72 275.0 151 85.4
Duzib168G0494 Durio zibethinus HOM05D006214 ORTHO05D007723 3.9e-72 275.0 164 80.5
Manes.16G067000 Manihot esculenta HOM05D006214 ORTHO05D007723 5.1e-72 274.6 164 78.7
Sopen08g021960 Solanum pennellii HOM05D006214 ORTHO05D007723 5.1e-72 274.6 166 78.9
SGA_v2.0_scaffold27G11530 Striga asiatica HOM05D006214 ORTHO05D007723 5.1e-72 274.6 179 75.4
A01p05650 Brassica napus HOM05D003889 ORTHO05D004407 6.6e-72 274.2 155 83.2
Aa31LG2G16930 Aethionema arabicum HOM05D006214 ORTHO05D007723 8.7e-72 273.9 168 78.0
VMungo0647G2273 Vigna mungo HOM05D006214 ORTHO05D007723 8.7e-72 273.9 163 81.0
arahy.Tifrunner.gnm1.ann1.72Y1Y4 Arachis hypogaea HOM05D006214 ORTHO05D007723 1.1e-71 273.5 163 80.4
C01p06220 Brassica napus HOM05D003889 ORTHO05D004407 1.5e-71 273.1 167 79.0
CARHR240670 Cardamine hirsuta HOM05D006214 ORTHO05D007723 1.5e-71 273.1 161 80.7
FAN15G3028 Fragaria x ananassa HOM05D006214 ORTHO05D007723 1.9e-71 272.7 151 84.8
AL7G19050 Arabidopsis lyrata HOM05D006214 ORTHO05D007723 2.5e-71 272.3 170 77.6
BolC1t00620H Brassica oleracea HOM05D006214 ORTHO05D007723 2.5e-71 272.3 169 78.1
Carub.0007s0784 Capsella rubella HOM05D006214 ORTHO05D007723 4.3e-71 271.6 161 79.5
Psat6g005800 Pisum sativum HOM05D006214 ORTHO05D007723 5.6e-71 271.2 163 78.5
BcaC09g52063 Brassica carinata HOM05D003889 ORTHO05D004407 9.6e-71 270.4 167 79.0
BraA01t00535Z Brassica rapa HOM05D003889 ORTHO05D004407 1.3e-70 270.0 153 83.0
TPR.G12079 Trifolium pratense HOM05D006214 ORTHO05D007723 1.3e-70 270.0 163 78.5
ATR1120G189 Amborella trichopoda HOM05D006214 ORTHO05D007723 2.1e-70 269.2 164 77.4
AT4G32690 Arabidopsis thaliana HOM05D006214 ORTHO05D007723 2.1e-70 269.2 170 76.5
TAR624G0931 Trochodendron aralioides HOM05D006214 ORTHO05D007723 2.8e-70 268.9 165 78.8
Lj1g0018426 Lotus japonicus HOM05D006214 ORTHO05D007723 6.2e-70 267.7 167 77.8
arahy.Tifrunner.gnm1.ann1.8TR5WT Arachis hypogaea HOM05D006214 ORTHO05D007723 1.1e-69 266.9 163 77.9
Ca_12821_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 1.1e-69 266.9 163 77.3
Ca_12822_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 1.1e-69 266.9 163 77.3
Peaxi162Scf00105g00059 Petunia axillaris HOM05D006214 ORTHO05D007723 2.4e-69 265.8 164 76.2
VMungo1309G2769 Vigna mungo HOM05D006214 ORTHO05D007723 2.4e-69 265.8 170 74.7
Glyma.14G140400 Glycine max HOM05D006214 ORTHO05D007723 6.9e-69 264.2 166 76.5
Solyc08g068090.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 9.0e-69 263.8 163 77.9
Sopen08g021970 Solanum pennellii HOM05D006214 ORTHO05D007723 2.0e-68 262.7 165 77.0
MD15G1099500 Malus domestica HOM05D006214 ORTHO05D007723 2.6e-68 262.3 156 80.1
Phvul.009G104900 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 5.8e-68 261.2 165 74.5
Psat0s1478g0160 Pisum sativum HOM05D006214 ORTHO05D007723 5.8e-68 261.2 160 79.4
Ah.12g061040 Amaranthus hybridus HOM05D006214 ORTHO05D007723 7.6e-68 260.8 166 76.5
Lalb_Chr08g0243361 Lupinus albus HOM05D006214 ORTHO05D007723 1.3e-67 260.0 162 78.4
Lj1g0018927 Lotus japonicus HOM05D006214 ORTHO05D007723 1.7e-67 259.6 164 75.6
Phvul.001G060001 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 2.2e-67 259.2 164 76.8
Lj8A606G25 Lonicera japonica HOM05D006214 ORTHO05D007723 4.9e-67 258.1 188 69.7
FvH4_2g36290 Fragaria vesca HOM05D006214 ORTHO05D007723 8.4e-67 257.3 151 81.5
SEGI_02532 Sequoiadendron giganteum HOM05D006214 ORTHO05D007723 1.4e-66 256.5 155 78.1
FAN20G2536 Fragaria x ananassa HOM05D006214 ORTHO05D007723 1.9e-66 256.1 151 80.8
Ca_15627_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 3.2e-66 255.4 163 76.1
Medtr3g109420 Medicago truncatula HOM05D006214 ORTHO05D007723 4.2e-66 255.0 160 78.1
FAN27G2409 Fragaria x ananassa HOM05D006214 ORTHO05D007723 7.1e-66 254.2 151 80.8
Glyma.04G079200 Glycine max HOM05D006214 ORTHO05D007723 7.1e-66 254.2 170 72.4
Atru.chr7.2182 Acer truncatum HOM05D006214 ORTHO05D007723 1.6e-65 253.1 139 84.2
Atru.chr7.2299 Acer truncatum HOM05D006214 ORTHO05D007723 1.6e-65 253.1 139 84.2
TPR.G1342 Trifolium pratense HOM05D006214 ORTHO05D007723 7.9e-65 250.8 162 77.2
Zm00001eb386050 Zea mays HOM05D006214 ORTHO05D007723 1.0e-64 250.4 166 72.9
Os06g0591600 Oryza sativa ssp. japonica HOM05D006214 ORTHO05D007723 1.3e-64 250.0 168 72.6
Eucgr.L03669 Eucalyptus grandis HOM05D006214 ORTHO05D007723 8.7e-64 247.3 164 73.8
HPP92_005176 Vanilla planifolia HOM05D006214 ORTHO05D007723 1.8e-61 239.6 186 64.5
SMO164G0258 Selaginella moellendorffii HOM05D006214 ORTHO05D007723 2.6e-60 235.7 150 74.7
arahy.Tifrunner.gnm1.ann1.LJ0T63 Arachis hypogaea HOM05D006214 ORTHO05D007723 5.5e-58 228.0 142 78.9
Pp3c1_3380 Physcomitrium patens HOM05D006214 ORTHO05D007723 5.5e-58 228.0 148 73.6
Sabra06G0191200 Salix brachista HOM05D006214 ORTHO05D007723 6.0e-57 224.6 165 71.5
Gohir.D05G051050 Gossypium hirsutum HOM05D006214 ORTHO05D007723 1.8e-56 223.0 177 65.5
AagrBONN_evm.TU.Sc2ySwM_368.1910 Anthoceros agrestis HOM05D006214 ORTHO05D007723 2.5e-55 219.2 157 69.4
AUR62024819 Chenopodium quinoa HOM05D006214 ORTHO05D007723 1.3e-54 216.9 119 82.4
Pp3c6_250 Physcomitrium patens HOM05D006214 ORTHO05D007723 1.3e-54 216.9 150 67.3
unitig_0.g2807 Utricularia gibba HOM05D006435 ORTHO05D008262 1.3e-54 216.9 141 74.5
ECA233G3302 Erigeron canadensis HOM05D006214 ORTHO05D007723 1.4e-53 213.4 305 43.9
CAN.G886.7 Capsicum annuum HOM05D006214 ORTHO05D007723 3.1e-53 212.2 134 78.4
Gorai.009G052700 Gossypium raimondii HOM05D006214 ORTHO05D007723 3.5e-49 198.7 110 84.5
EL10Ac2g02522 Beta vulgaris HOM05D006214 ORTHO05D007723 4.5e-44 181.8 174 58.0
ClCG08G012410 Citrullus lanatus HOM05D006214 ORTHO05D007723 4.8e-38 161.8 203 47.3
MBI04_g08934_MAGBIO Magnolia biondii HOM05D006214 ORTHO05D003073 4.8e-38 161.8 302 37.4
TAR636G1550 Trochodendron aralioides HOM05D006214 ORTHO05D007723 1.0e-35 154.1 212 45.8
CSS0020447 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 4.1e-29 132.1 84 79.8
Potri.018G036200 Populus trichocarpa HOM05D006214 ORTHO05D007723 7.2e-26 121.3 75 72.0
Lsat_1_v5_gn_6_11301 Lactuca sativa HOM05D006214 ORTHO05D007723 1.6e-25 120.2 67 85.1
CSS0007395 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 8.8e-24 114.4 67 73.1
C01p47490 Brassica napus HOM05D006214 ORTHO05D007723 4.5e-20 102.1 79 59.5
BolC1t04720H Brassica oleracea HOM05D006214 ORTHO05D007723 6.3e-14 81.6 44 77.3
HanXRQChr07g0195131 Helianthus annuus HOM05D006214 ORTHO05D007723 3.5e-12 75.9 81 55.6
Glyma.06G080700 Glycine max HOM05D006214 ORTHO05D007723 1.3e-11 73.9 67 49.3
Peaxi162Scf00105g00513 Petunia axillaris HOM05D006214 ORTHO05D007723 8.5e-11 71.2 88 43.2
arahy.Tifrunner.gnm1.ann1.YGZX15 Arachis hypogaea HOM05D000254 ORTHO05D000165 2.1e-09 66.6 119 34.5
SMO164G0257 Selaginella moellendorffii HOM05D014720 ORTHO05D377594 1.3e-06 57.4 47 63.8
Nitab4.5_0000250g0200 Nicotiana tabacum HOM05D006214 ORTHO05D007723 1.7e-06 57.0 38 65.8


User provided reference genes

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