Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G205600 Carya illinoinensis HOM05D003951 ORTHO05D005378 7.6e-42 173.3 82 100.0
Cfa013355 Carpinus fangiana HOM05D003951 ORTHO05D005378 1.3e-33 146.0 81 80.2
Haze_16526 Corylus avellana HOM05D003951 ORTHO05D005378 1.7e-33 145.6 81 80.2
CiPaw.08G024600 Carya illinoinensis HOM05D003951 ORTHO05D005378 3.8e-33 144.4 81 81.5
QL12p029450 Quercus lobata HOM05D003951 ORTHO05D005378 6.4e-33 143.7 82 82.9
VMungo1309G1090 Vigna mungo HOM05D003951 ORTHO05D005378 1.0e-30 136.3 82 76.8
Phvul.009G107800 Phaseolus vulgaris HOM05D003951 ORTHO05D005378 1.3e-30 136.0 82 75.6
TPR.G1335 Trifolium pratense HOM05D003951 ORTHO05D005378 1.7e-30 135.6 82 78.0
CSS0015540 Camellia sinensis var. sinensis HOM05D003951 ORTHO05D005378 2.3e-30 135.2 82 74.4
Dinv30270 Davidia involucrata HOM05D003951 ORTHO05D005378 2.3e-30 135.2 82 73.2
Glyma.06G083700 Glycine max HOM05D003951 ORTHO05D005378 3.9e-30 134.4 82 75.6
COL.COLO4_18674 Corchorus olitorius HOM05D003951 ORTHO05D005378 6.6e-30 133.7 82 75.6
Dinv14244 Davidia involucrata HOM05D003951 ORTHO05D005378 6.6e-30 133.7 82 75.6
Glyma.04G082000 Glycine max HOM05D003951 ORTHO05D005378 8.7e-30 133.3 82 75.6
Psat5g022720 Pisum sativum HOM05D003951 ORTHO05D005378 8.7e-30 133.3 82 74.4
Duzib187G0774 Durio zibethinus HOM05D003951 ORTHO05D005378 1.1e-29 132.9 82 75.6
Manes.03G061800 Manihot esculenta HOM05D003951 ORTHO05D005378 1.1e-29 132.9 82 74.4
Medtr3g110090 Medicago truncatula HOM05D003951 ORTHO05D005378 2.5e-29 131.7 82 75.6
Medtr3g110140 Medicago truncatula HOM05D003951 ORTHO05D005378 2.5e-29 131.7 82 75.6
arahy.Tifrunner.gnm1.ann1.6KB6B4 Arachis hypogaea HOM05D003951 ORTHO05D005378 3.3e-29 131.3 82 73.2
arahy.Tifrunner.gnm1.ann1.ZA6ZKK Arachis hypogaea HOM05D003951 ORTHO05D005378 3.3e-29 131.3 82 73.2
GSVIVG01035648001 Vitis vinifera HOM05D003951 ORTHO05D005378 3.3e-29 131.3 82 74.4
Ca_15606_v3 Cicer arietinum L. HOM05D003951 ORTHO05D005378 7.3e-29 130.2 82 74.4
Actinidia14667 Actinidia chinensis HOM05D003951 ORTHO05D005378 9.6e-29 129.8 82 74.4
TWI32G0786 Tripterygium wilfordii HOM05D003951 ORTHO05D005378 9.6e-29 129.8 82 69.5
Thecc.09G042400 Theobroma cacao HOM05D003951 ORTHO05D005378 1.3e-28 129.4 82 73.2
RcHm_v2.0_Chr6g0305971 Rosa chinensis HOM05D003951 ORTHO05D005378 2.1e-28 128.6 82 73.2
Aa31LG3G15640 Aethionema arabicum HOM05D003951 ORTHO05D005378 2.8e-28 128.3 82 68.3
Gohir.A13G186000 Gossypium hirsutum HOM05D003951 ORTHO05D005378 2.8e-28 128.3 82 73.2
Gorai.013G218700 Gossypium raimondii HOM05D003951 ORTHO05D005378 2.8e-28 128.3 82 73.2
Sed0007642 Sechium edule HOM05D003951 ORTHO05D005378 2.8e-28 128.3 81 70.4
FAN15G0863 Fragaria x ananassa HOM05D003951 ORTHO05D005378 3.6e-28 127.9 82 70.7
FvH4_2g35850 Fragaria vesca HOM05D003951 ORTHO05D005378 4.8e-28 127.5 82 69.5
FAN27G3265 Fragaria x ananassa HOM05D003951 ORTHO05D005378 4.8e-28 127.5 82 69.5
MELO3C011151.2 Cucumis melo HOM05D003951 ORTHO05D005378 6.2e-28 127.1 81 69.1
Gohir.D08G272000 Gossypium hirsutum HOM05D003951 ORTHO05D005378 8.1e-28 126.7 82 72.0
Gorai.004G290400 Gossypium raimondii HOM05D003951 ORTHO05D005378 8.1e-28 126.7 82 72.0
Lalb_Chr23g0269551 Lupinus albus HOM05D003951 ORTHO05D005378 8.1e-28 126.7 81 70.4
BcaNung01934 Brassica carinata HOM05D003951 ORTHO05D005378 1.1e-27 126.3 81 67.9
Sp6g32040 Schrenkiella parvula HOM05D003951 ORTHO05D005378 1.1e-27 126.3 81 67.9
Carub.0006s1003 Capsella rubella HOM05D003951 ORTHO05D005378 1.4e-27 125.9 81 69.1
CsaV3_2G030980 Cucumis sativus L. HOM05D003951 ORTHO05D005378 1.4e-27 125.9 81 67.9
Gohir.D13G192700 Gossypium hirsutum HOM05D003951 ORTHO05D005378 1.4e-27 125.9 82 72.0
Thhalv10012570m.g Eutrema salsugineum HOM05D003951 ORTHO05D005378 1.8e-27 125.6 81 66.7
Sed0024259 Sechium edule HOM05D003951 ORTHO05D005378 1.8e-27 125.6 81 66.7
vmacro10453 Vaccinium macrocarpon HOM05D003951 ORTHO05D005378 1.8e-27 125.6 82 70.7
ClCG08G012310 Citrullus lanatus HOM05D003951 ORTHO05D005378 2.4e-27 125.2 80 70.0
Lj1g0011830 Lotus japonicus HOM05D003951 ORTHO05D005378 2.4e-27 125.2 82 69.5
Prupe.1G450600 Prunus persica HOM05D003951 ORTHO05D005378 2.4e-27 125.2 82 68.3
AL6G22230 Arabidopsis lyrata HOM05D003951 ORTHO05D005378 3.1e-27 124.8 81 67.9
AT5G11560 Arabidopsis thaliana HOM05D003951 ORTHO05D005378 3.1e-27 124.8 81 67.9
Lalb_Chr08g0243161 Lupinus albus HOM05D003951 ORTHO05D005378 3.1e-27 124.8 81 70.4
BcaC04g19214 Brassica carinata HOM05D003951 ORTHO05D005378 4.0e-27 124.4 81 66.7
C09p65250 Brassica napus HOM05D003951 ORTHO05D005378 4.0e-27 124.4 81 66.7
BcaB08g37043 Brassica carinata HOM05D003951 ORTHO05D005378 5.3e-27 124.0 81 66.7
BcaC03g13375 Brassica carinata HOM05D003951 ORTHO05D005378 5.3e-27 124.0 81 66.7
TAR383G0035 Trochodendron aralioides HOM05D003951 ORTHO05D005378 5.3e-27 124.0 82 68.3
FAN20G1017 Fragaria x ananassa HOM05D003951 ORTHO05D005378 6.9e-27 123.6 82 67.1
A10p26200 Brassica napus HOM05D003951 ORTHO05D005378 9.0e-27 123.2 81 65.4
BraA10t44677Z Brassica rapa HOM05D003951 ORTHO05D005378 9.0e-27 123.2 81 65.4
MD15G1095600 Malus domestica HOM05D003951 ORTHO05D005378 9.0e-27 123.2 82 69.5
Hma1.2p1_0590F.1_g185010 Hydrangea macrophylla HOM05D003951 ORTHO05D005378 1.2e-26 122.9 82 65.9
CARHR201660 Cardamine hirsuta HOM05D003951 ORTHO05D005378 1.5e-26 122.5 81 65.4
DCAR_004489 Daucus carota HOM05D003951 ORTHO05D005378 2.6e-26 121.7 82 67.1
Gohir.A06G094100 Gossypium hirsutum HOM05D003951 ORTHO05D005378 2.6e-26 121.7 82 67.1
Gohir.A08G250500 Gossypium hirsutum HOM05D003951 ORTHO05D005378 2.6e-26 121.7 82 68.3
Gohir.D06G093700 Gossypium hirsutum HOM05D003951 ORTHO05D005378 2.6e-26 121.7 82 65.9
Gorai.010G108200 Gossypium raimondii HOM05D003951 ORTHO05D005378 2.6e-26 121.7 82 65.9
BolC9t59353H Brassica oleracea HOM05D003951 ORTHO05D005378 3.4e-26 121.3 81 65.4
Cc06_g04830 Coffea canephora HOM05D003951 ORTHO05D005378 3.4e-26 121.3 82 68.3
Sabra06G0187900 Salix brachista HOM05D003951 ORTHO05D005378 3.4e-26 121.3 82 69.5
C02p05210 Brassica napus HOM05D003951 ORTHO05D005378 5.8e-26 120.6 81 65.4
Lj8A588G18 Lonicera japonica HOM05D003951 ORTHO05D005378 5.8e-26 120.6 82 67.1
A02p01070 Brassica napus HOM05D003951 ORTHO05D005378 9.9e-26 119.8 81 64.2
BraA02t05087Z Brassica rapa HOM05D003951 ORTHO05D005378 9.9e-26 119.8 81 64.2
Sabra18G0039700 Salix brachista HOM05D003951 ORTHO05D005378 2.2e-25 118.6 82 68.3
Potri.006G240300 Populus trichocarpa HOM05D003951 ORTHO05D005378 2.9e-25 118.2 82 69.5
Potri.018G039800 Populus trichocarpa HOM05D003951 ORTHO05D005378 2.9e-25 118.2 81 69.1
Migut.J00480 Erythranthe guttata HOM05D003951 ORTHO05D005378 3.8e-25 117.9 80 61.2
Ciclev10007348m.g Citrus clementina HOM05D003951 ORTHO05D005378 4.9e-25 117.5 82 63.4
Hund19527 Selenicereus undatus HOM05D003951 ORTHO05D005378 6.4e-25 117.1 82 63.4
MD08G1115900 Malus domestica HOM05D003951 ORTHO05D005378 8.4e-25 116.7 82 64.6
Nn2g11661 Nelumbo nucifera HOM05D003951 ORTHO05D005378 1.4e-24 115.9 82 65.9
Atru.chr7.2135 Acer truncatum HOM05D003951 ORTHO05D005378 1.9e-24 115.5 82 63.4
CANSAT25G2930 Cannabis sativa HOM05D003951 ORTHO05D005378 2.4e-24 115.2 82 64.6
Cpa.g.sc7.257 Carica papaya HOM05D003951 ORTHO05D005378 2.4e-24 115.2 82 65.9
MSTRG.19211 Avicennia marina HOM05D003951 ORTHO05D005378 4.2e-24 114.4 81 63.0
EL10Ac2g04048 Beta vulgaris HOM05D003951 ORTHO05D005378 7.1e-24 113.6 82 58.5
Nitab4.5_0010350g0010 Nicotiana tabacum HOM05D003951 ORTHO05D005378 7.1e-24 113.6 82 58.5
BolC2t06471H Brassica oleracea HOM05D003951 ORTHO05D005378 9.3e-24 113.2 81 61.7
Nitab4.5_0008726g0020 Nicotiana tabacum HOM05D003951 ORTHO05D005378 1.2e-23 112.8 82 58.5
SalBow3G1921 Salvia bowleyana HOM05D003951 ORTHO05D005378 2.7e-23 111.7 81 63.0
ECA233G3193 Erigeron canadensis HOM05D003951 ORTHO05D005378 7.9e-23 110.2 82 62.2
Nitab4.5_0004281g0080 Nicotiana tabacum HOM05D003951 ORTHO05D005378 7.9e-23 110.2 82 57.3
AUR62009306 Chenopodium quinoa HOM05D003951 ORTHO05D005378 1.3e-22 109.4 82 56.1
Eucgr.C02905 Eucalyptus grandis HOM05D003951 ORTHO05D005378 1.3e-22 109.4 81 59.3
Sopen09g003410 Solanum pennellii HOM05D003951 ORTHO05D005378 1.8e-22 109.0 82 56.1
CANSAT56G0789 Cannabis sativa HOM05D003951 ORTHO05D005378 3.0e-22 108.2 81 61.7
CANSAT56G2409 Cannabis sativa HOM05D003951 ORTHO05D005378 3.0e-22 108.2 82 62.2
AUR62041721 Chenopodium quinoa HOM05D003951 ORTHO05D005378 3.0e-22 108.2 82 56.1
AUR62043518 Chenopodium quinoa HOM05D003951 ORTHO05D005378 3.0e-22 108.2 82 56.1
Lj7A704G78 Lonicera japonica HOM05D003951 ORTHO05D005378 3.0e-22 108.2 82 61.0
Sc23g0005190 Simmondsia chinensis HOM05D003951 ORTHO05D005378 3.0e-22 108.2 82 59.8
PGSC0003DMG400012982 Solanum tuberosum HOM05D003951 ORTHO05D005378 3.0e-22 108.2 82 56.1
Lsat_1_v5_gn_6_63741 Lactuca sativa HOM05D003951 ORTHO05D005378 5.1e-22 107.5 81 61.7
MBI04_g14936_MAGBIO Magnolia biondii HOM05D003951 ORTHO05D005378 5.1e-22 107.5 82 56.1
Nitab4.5_0000132g0420 Nicotiana tabacum HOM05D003951 ORTHO05D005378 5.1e-22 107.5 82 57.3
CAN.G1759.1 Capsicum annuum HOM05D003951 ORTHO05D005378 8.7e-22 106.7 82 57.3
PSO210G7231 Papaver somniferum HOM05D003951 ORTHO05D005378 8.7e-22 106.7 81 61.7
Solyc09g008610.4 Solanum lycopersicum HOM05D003951 ORTHO05D005378 8.7e-22 106.7 82 54.9
Oeu017004.2 Olea europaea HOM05D003951 ORTHO05D005378 1.1e-21 106.3 81 58.0
PSO210G0075 Papaver somniferum HOM05D003951 ORTHO05D005378 1.9e-21 105.5 81 60.5
THA.LOC104814774 Tarenaya hassleriana HOM05D003951 ORTHO05D005378 1.9e-21 105.5 80 58.8
Ah.16g105420 Amaranthus hybridus HOM05D003951 ORTHO05D005378 3.3e-21 104.8 81 56.8
Ah.16g105540 Amaranthus hybridus HOM05D003951 ORTHO05D005378 3.3e-21 104.8 81 56.8
Peaxi162Scf01195g00118 Petunia axillaris HOM05D003951 ORTHO05D005378 4.3e-21 104.4 82 58.5
Ah.16g105530 Amaranthus hybridus HOM05D003951 ORTHO05D005378 5.6e-21 104.0 81 56.8
Oeu038879.1 Olea europaea HOM05D003951 ORTHO05D005378 7.4e-21 103.6 81 56.8
SGA_v2.0_scaffold40G15445 Striga asiatica HOM05D003951 ORTHO05D005378 9.6e-21 103.2 81 58.0
SGA_v2.0_scaffold657G53382 Striga asiatica HOM05D003951 ORTHO05D005378 9.6e-21 103.2 81 58.0
PGR044G0887 Punica granatum HOM05D003951 ORTHO05D005378 1.3e-20 102.8 82 54.9
Ah.10g035090 Amaranthus hybridus HOM05D003951 ORTHO05D005378 4.8e-20 100.9 82 50.0
Aqoxy7G01531 Aquilegia oxysepala HOM05D003951 ORTHO05D005378 4.8e-20 100.9 81 55.6
CDE09G1231 Ceratophyllum demersum HOM05D003951 ORTHO05D005378 4.8e-20 100.9 80 58.8
ATR0315G102 Amborella trichopoda HOM05D003951 ORTHO05D005378 2.4e-19 98.6 82 54.9
TAR626G1339 Trochodendron aralioides HOM05D003951 ORTHO05D005378 9.0e-19 96.7 64 67.2
HanXRQChr08g0221151 Helianthus annuus HOM05D003951 ORTHO05D005378 1.5e-18 95.9 81 56.8
Os05g0230600 Oryza sativa ssp. japonica HOM05D003951 ORTHO05D005378 1.5e-18 95.9 81 48.1
SHI18663 Sapria himalayana HOM05D003951 ORTHO05D005378 7.6e-18 93.6 83 51.8
Zm00001eb284300 Zea mays HOM05D003951 ORTHO05D005378 2.2e-17 92.0 82 45.1
Zm00001eb350390 Zea mays HOM05D003951 ORTHO05D005378 2.9e-17 91.7 81 44.4
vmacro07087 Vaccinium macrocarpon HOM05D003951 ORTHO05D005378 4.8e-12 74.3 48 70.8
Actinidia31233 Actinidia chinensis HOM05D006865 ORTHO05D009005 5.8e-10 67.4 41 73.2
Pp3c24_6940 Physcomitrium patens HOM05D003951 ORTHO05D005378 4.2e-08 61.2 85 38.8
SMO361G0709 Selaginella moellendorffii HOM05D003951 ORTHO05D005378 2.1e-07 58.9 82 31.7
AagrBONN_evm.TU.Sc2ySwM_228.1359 Anthoceros agrestis HOM05D003951 ORTHO05D005378 3.5e-07 58.2 84 31.0
HPP92_003925 Vanilla planifolia HOM05D003951 ORTHO05D005378 1.3e-06 56.2 52 53.8
Mapoly0001s0045 Marchantia polymorpha HOM05D003951 ORTHO05D005378 1.8e-06 55.8 85 28.2


User provided reference genes

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