Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 4.5e-178 627.9 326 100.0
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 2.2e-145 519.2 326 83.4
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 6.1e-135 484.6 326 79.1
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 4.7e-127 458.4 327 75.5
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 4.7e-127 458.4 329 75.7
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 8.8e-126 454.1 331 74.0
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 2.0e-125 453.0 327 74.6
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 2.0e-125 453.0 326 74.5
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 9.8e-125 450.7 323 74.3
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 8.3e-124 447.6 327 72.8
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.8e-123 446.4 330 74.8
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 5.4e-123 444.9 325 75.1
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 5.4e-123 444.9 322 76.4
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 9.1e-123 444.1 330 74.5
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 1.6e-122 443.4 330 73.3
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 6.5e-121 438.0 326 73.0
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 1.1e-120 437.2 331 73.1
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 1.6e-119 433.3 320 73.1
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 1.6e-119 433.3 321 72.6
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 2.8e-119 432.6 327 71.9
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 3.6e-119 432.2 304 74.7
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 4.7e-119 431.8 327 71.3
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 6.1e-119 431.4 326 71.2
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 1.4e-118 430.3 327 70.3
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 1.4e-118 430.3 332 70.2
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 1.8e-118 429.9 325 68.6
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 3.0e-118 429.1 326 72.7
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 1.2e-117 427.2 333 70.3
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 1.2e-117 427.2 330 70.6
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 1.2e-117 427.2 332 69.6
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 2.6e-117 426.0 327 70.3
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 4.4e-117 425.2 331 69.8
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 7.5e-117 424.5 325 72.3
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 9.8e-117 424.1 332 68.4
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 8.3e-116 421.0 330 70.0
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 1.1e-115 420.6 324 71.3
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 1.4e-115 420.2 269 81.0
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 1.8e-115 419.9 322 70.8
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 1.8e-115 419.9 322 70.5
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 3.1e-115 419.1 293 74.7
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 7.0e-115 417.9 335 68.1
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 9.2e-115 417.5 348 66.7
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 1.2e-114 417.2 321 69.8
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 1.6e-114 416.8 283 78.4
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 2.0e-114 416.4 321 69.5
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 2.0e-114 416.4 333 69.1
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 2.7e-114 416.0 322 69.3
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 2.7e-114 416.0 261 80.5
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 3.5e-114 415.6 261 81.6
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 5.9e-114 414.8 291 75.9
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 5.9e-114 414.8 293 75.8
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 7.8e-114 414.5 327 68.5
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 2.3e-113 412.9 328 68.6
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 2.9e-113 412.5 352 66.5
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 2.9e-113 412.5 328 68.6
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 3.8e-113 412.1 325 68.6
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 5.0e-113 411.8 328 68.6
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 5.0e-113 411.8 291 75.6
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 1.1e-112 410.6 339 66.4
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 7.3e-112 407.9 371 63.1
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 4.7e-111 405.2 325 67.4
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 2.3e-110 402.9 327 67.0
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 2.3e-110 402.9 326 66.6
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 3.0e-110 402.5 326 67.8
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 3.0e-110 402.5 261 80.1
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 5.2e-110 401.7 326 69.0
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 1.2e-109 400.6 262 77.9
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 2.0e-109 399.8 324 67.3
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 2.6e-109 399.4 323 66.9
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 3.4e-109 399.1 249 81.9
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 9.8e-109 397.5 326 66.6
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 1.3e-108 397.1 325 66.5
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 1.3e-108 397.1 330 68.2
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 2.9e-108 396.0 343 65.6
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 3.7e-108 395.6 326 66.9
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 1.6e-106 390.2 331 67.7
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 2.7e-106 389.4 250 82.0
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 2.3e-105 386.3 236 84.3
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 1.9e-104 383.3 344 64.5
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 3.3e-104 382.5 294 68.0
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 2.8e-103 379.4 327 65.7
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 1.8e-102 376.7 353 61.5
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 1.2e-101 374.0 238 79.8
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 2.0e-101 373.2 316 64.9
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 7.8e-98 361.3 292 66.4
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 1.3e-97 360.5 261 75.1
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 5.6e-96 355.1 259 69.5
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 4.0e-94 349.0 250 72.8
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 7.5e-93 344.7 268 66.8
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 3.2e-91 339.3 328 59.1
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 4.1e-91 339.0 258 72.9
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 8.6e-89 331.3 221 76.0
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 8.6e-89 331.3 235 71.9
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 1.9e-88 330.1 231 74.0
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 4.7e-87 325.5 326 59.8
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 2.4e-86 323.2 271 65.3
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 1.3e-84 317.4 220 75.0
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 3.0e-81 306.2 216 69.4
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 7.3e-80 301.6 192 80.2
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 1.4e-78 297.4 189 79.9
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 3.9e-73 279.3 261 55.2
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 9.0e-70 268.1 260 53.8
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 3.2e-67 259.6 263 51.7
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 2.4e-62 243.4 263 48.7
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 7.6e-61 238.4 251 51.4
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.9e-59 233.8 253 49.8
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 7.9e-58 228.4 253 49.0
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.0e-57 228.0 249 52.2
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 4.5e-53 212.6 129 82.9
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 2.2e-47 193.7 258 42.2
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 7.2e-43 178.7 166 64.5
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 8.8e-41 171.8 249 42.6
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 2.8e-39 166.8 123 69.9
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 3.8e-36 156.4 246 36.6
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 3.6e-26 123.2 290 36.6
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 3.3e-24 116.7 244 31.1
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 7.2e-19 99.0 235 31.1
Atru.chr6.459 Acer truncatum HOM05D006532 ORTHO05D008570 4.4e-08 63.2 146 37.7
Hund03397 Selenicereus undatus HOM05D006532 ORTHO05D381031 2.8e-07 60.5 32 96.9
Sc11g0003830 Simmondsia chinensis HOM05D006532 ORTHO05D387458 4.8e-07 59.7 52 57.7
PGSC0003DMG401002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 4.8e-07 59.7 86 47.7


User provided reference genes

Program Settings