Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G200900 Carya illinoinensis HOM05D008207 ORTHO05D010373 5.9e-191 670.6 319 100.0
Dinv41210 Davidia involucrata HOM05D008207 ORTHO05D010373 1.7e-129 466.5 308 71.4
FAN17G2040 Fragaria x ananassa HOM05D008207 ORTHO05D010373 1.9e-128 463.0 283 74.9
Glyma.13G103300 Glycine max HOM05D008207 ORTHO05D010373 1.9e-128 463.0 279 76.3
TAR625G1057 Trochodendron aralioides HOM05D008207 ORTHO05D010373 1.9e-128 463.0 304 72.4
RcHm_v2.0_Chr4g0398551 Rosa chinensis HOM05D008207 ORTHO05D010373 2.4e-128 462.6 313 70.3
GSVIVG01029258001 Vitis vinifera HOM05D008207 ORTHO05D010373 3.2e-128 462.2 291 74.6
VMungo1215G1326 Vigna mungo HOM05D008207 ORTHO05D010373 5.4e-128 461.5 278 76.6
arahy.Tifrunner.gnm1.ann1.PC6R8Z Arachis hypogaea HOM05D008207 ORTHO05D010373 8.6e-126 454.1 274 76.3
Hma1.2p1_0235F.1_g099000 Hydrangea macrophylla HOM05D008207 ORTHO05D010373 2.5e-125 452.6 290 74.5
Phvul.003G137466 Phaseolus vulgaris HOM05D008207 ORTHO05D010373 3.3e-125 452.2 277 75.8
Medtr4g126910 Medicago truncatula HOM05D008207 ORTHO05D010373 3.6e-124 448.7 297 73.1
TPR.G5411 Trifolium pratense HOM05D008207 ORTHO05D010373 6.2e-124 448.0 282 77.0
Ca_21275_v3 Cicer arietinum L. HOM05D008207 ORTHO05D010373 8.9e-123 444.1 288 73.3
CSS0025795 Camellia sinensis var. sinensis HOM05D008207 ORTHO05D010373 1.2e-122 443.7 277 75.1
FAN22G1797 Fragaria x ananassa HOM05D008207 ORTHO05D010373 2.0e-122 443.0 301 69.8
Lalb_Chr12g0199751 Lupinus albus HOM05D008207 ORTHO05D010373 1.3e-121 440.3 284 73.9
arahy.Tifrunner.gnm1.ann1.7T8Q8E Arachis hypogaea HOM05D008207 ORTHO05D010373 2.2e-121 439.5 289 72.0
MELO3C017404.2 Cucumis melo HOM05D008207 ORTHO05D010373 1.9e-120 436.4 287 70.7
Aqoxy7G02948 Aquilegia oxysepala HOM05D008207 ORTHO05D010373 1.0e-118 430.6 298 70.5
FAN07G0484 Fragaria x ananassa HOM05D008207 ORTHO05D010373 1.7e-118 429.9 283 70.3
Sed0019966 Sechium edule HOM05D008207 ORTHO05D010373 1.7e-118 429.9 285 70.2
Lj4g0004064 Lotus japonicus HOM05D008207 ORTHO05D010373 8.7e-118 427.6 280 73.6
CsaV3_1G032120 Cucumis sativus L. HOM05D008207 ORTHO05D010373 1.9e-117 426.4 285 69.5
MBI14_g19451_MAGBIO Magnolia biondii HOM05D008207 ORTHO05D010373 6.2e-116 421.4 309 64.7
Prupe.1G068900 Prunus persica HOM05D008207 ORTHO05D010373 3.1e-115 419.1 272 73.2
ClCG06G013910 Citrullus lanatus HOM05D008207 ORTHO05D010373 5.8e-114 414.8 305 64.9
Sabra12G0024900 Salix brachista HOM05D008207 ORTHO05D010373 2.2e-113 412.9 367 58.3
AUR62033242 Chenopodium quinoa HOM05D008207 ORTHO05D010373 8.4e-113 411.0 286 68.2
Eucgr.C00072 Eucalyptus grandis HOM05D008207 ORTHO05D010373 7.1e-112 407.9 285 66.7
PSO170G1964 Papaver somniferum HOM05D008207 ORTHO05D010373 1.2e-111 407.1 275 68.7
FAN12G1624 Fragaria x ananassa HOM05D008207 ORTHO05D000286 3.3e-109 399.1 272 70.2
Hund26321 Selenicereus undatus HOM05D008207 ORTHO05D010373 2.6e-106 389.4 281 65.5
ATR0580G068 Amborella trichopoda HOM05D008207 ORTHO05D010373 1.2e-103 380.6 314 59.6
Rhsim01G0002700 Rhododendron simsii HOM05D008207 ORTHO05D010373 4.9e-97 358.6 213 76.5
Aqoxy5G03535 Aquilegia oxysepala HOM05D008207 ORTHO05D010373 2.3e-94 349.7 257 68.9
AUR62021326 Chenopodium quinoa HOM05D008207 ORTHO05D010373 2.3e-94 349.7 280 61.4
DCAR_009922 Daucus carota HOM05D008207 ORTHO05D010373 2.3e-94 349.7 294 59.5
CDE05G0633 Ceratophyllum demersum HOM05D008207 ORTHO05D010373 2.6e-90 336.3 299 56.5
Psat4g014640 Pisum sativum HOM05D008207 ORTHO05D010373 2.2e-89 333.2 226 71.2
Haze_22076 Corylus avellana HOM05D008207 ORTHO05D010373 8.4e-89 331.3 192 80.7
vmacro13136 Vaccinium macrocarpon HOM05D008207 ORTHO05D010373 3.2e-88 329.3 309 56.0
EL10Ac8g18310 Beta vulgaris HOM05D008207 ORTHO05D010373 2.7e-87 326.2 263 62.7
Pp3c22_15400 Physcomitrium patens HOM05D008207 ORTHO05D010373 3.1e-83 312.8 315 50.2
FvH4_4g06651 Fragaria vesca HOM05D008207 ORTHO05D010373 7.2e-80 301.6 191 72.8
MD16G1242100 Malus domestica HOM05D008207 ORTHO05D010373 4.5e-74 282.3 217 64.5
Mapoly0010s0073 Marchantia polymorpha HOM05D008207 ORTHO05D010373 5.1e-70 268.9 242 54.1
Eucgr.L03679 Eucalyptus grandis HOM05D008207 ORTHO05D010373 8.0e-55 218.4 164 62.2
Potri.012G036400 Populus trichocarpa HOM05D008207 ORTHO05D010373 6.3e-52 208.8 145 69.0
SMO351G0474 Selaginella moellendorffii HOM05D008207 ORTHO05D010373 5.0e-49 199.1 278 42.8
Actinidia01309 Actinidia chinensis HOM05D008207 ORTHO05D010373 7.2e-48 195.3 113 77.9
Actinidia01310 Actinidia chinensis HOM05D008207 ORTHO05D010373 8.0e-47 191.8 122 73.0
Os02g0462401 Oryza sativa ssp. japonica HOM05D008207 ORTHO05D010373 7.3e-40 168.7 113 67.3
MD16G1242000 Malus domestica HOM05D008207 ORTHO05D010373 3.2e-35 153.3 112 67.9
Glyma.16G118000 Glycine max HOM05D008207 ORTHO05D010373 3.5e-34 149.8 92 77.2
arahy.Tifrunner.gnm1.ann1.G9LR05 Arachis hypogaea HOM05D008207 ORTHO05D010373 1.5e-32 144.4 95 69.5
Psat0s6286g0080 Pisum sativum HOM05D008207 ORTHO05D010373 3.3e-32 143.3 95 71.6
Glyma.02G093251 Glycine max HOM05D008207 ORTHO05D010373 5.0e-25 119.4 70 80.0
arahy.Tifrunner.gnm1.ann1.QBT4P1 Arachis hypogaea HOM05D008207 ORTHO05D010373 8.6e-25 118.6 103 57.3
MCO11G473 Micromonas commoda HOM05D008207 ORTHO05D010373 1.9e-24 117.5 276 31.9
Haze_22075 Corylus avellana HOM05D008207 ORTHO05D010373 4.3e-24 116.3 59 84.7
SEGI_04181 Sequoiadendron giganteum HOM05D008207 ORTHO05D010373 5.6e-24 115.9 72 70.8
SEGI_33506 Sequoiadendron giganteum HOM05D008207 ORTHO05D010373 1.6e-23 114.4 116 48.3
Os02g0462300 Oryza sativa ssp. japonica HOM05D008207 ORTHO05D010373 3.7e-20 103.2 79 58.2
Psat0s6286g0040 Pisum sativum HOM05D003133 ORTHO05D010373 1.1e-19 101.7 74 67.6
SEGI_16784 Sequoiadendron giganteum HOM05D008207 ORTHO05D010373 7.3e-16 89.0 52 67.3
Sabra15G0023300 Salix brachista HOM05D001936 ORTHO05D002296 1.2e-07 61.6 41 63.4


User provided reference genes

Program Settings