Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G198700 Carya illinoinensis HOM05D005890 ORTHO05D006717 2.5e-213 745.3 424 100.0
Cfa013466 Carpinus fangiana HOM05D005890 ORTHO05D006717 1.0e-94 351.3 472 51.7
QL07p048247 Quercus lobata HOM05D005890 ORTHO05D006717 4.4e-85 319.3 470 47.9
CiPaw.08G031700 Carya illinoinensis HOM05D005890 ORTHO05D006717 8.4e-68 261.9 431 47.1
Dinv41195 Davidia involucrata HOM05D005890 ORTHO05D006717 2.4e-62 243.8 567 38.4
GSVIVG01029286001 Vitis vinifera HOM05D005890 ORTHO05D006717 3.4e-61 240.0 445 39.8
MD16G1246300 Malus domestica HOM05D005890 ORTHO05D006717 7.1e-59 232.3 464 42.0
Glyma.17G058000 Glycine max HOM05D005890 ORTHO05D006717 1.6e-58 231.1 417 41.2
Potri.018G140200 Populus trichocarpa HOM05D005890 ORTHO05D006717 1.6e-58 231.1 472 39.8
Dinv25461 Davidia involucrata HOM05D005890 ORTHO05D006717 1.3e-57 228.0 533 35.1
DCAR_018014 Daucus carota HOM05D005890 ORTHO05D006717 7.3e-56 222.2 472 39.6
FAN17G2561 Fragaria x ananassa HOM05D005890 ORTHO05D006717 1.6e-55 221.1 414 44.7
CANSAT01G0113 Cannabis sativa HOM05D005890 ORTHO05D006717 6.2e-55 219.2 412 44.4
FAN07G1770 Fragaria x ananassa HOM05D005890 ORTHO05D006717 1.1e-54 218.4 414 41.1
Lj4g0027857 Lotus japonicus HOM05D005890 ORTHO05D006717 2.4e-54 217.2 428 40.9
Eucgr.C02214 Eucalyptus grandis HOM05D005890 ORTHO05D006717 4.0e-54 216.5 481 37.4
FAN12G2329 Fragaria x ananassa HOM05D005890 ORTHO05D006717 9.0e-54 215.3 414 41.3
Sabra06G0054500 Salix brachista HOM05D005890 ORTHO05D006717 7.6e-53 212.2 484 41.1
Ciclev10008727m.g Citrus clementina HOM05D005890 ORTHO05D006717 1.7e-52 211.1 358 45.0
Thecc.09G191500 Theobroma cacao HOM05D005890 ORTHO05D006717 4.9e-52 209.5 458 38.6
Duzib170G1164 Durio zibethinus HOM05D005890 ORTHO05D006717 1.4e-51 208.0 494 36.8
Manes.06G017800 Manihot esculenta HOM05D005890 ORTHO05D006717 1.2e-50 204.9 430 38.4
Lalb_Chr13g0299851 Lupinus albus HOM05D005890 ORTHO05D006717 2.7e-50 203.8 417 41.5
Medtr4g127160 Medicago truncatula HOM05D005890 ORTHO05D006717 6.0e-50 202.6 424 39.4
Glyma.13G101600 Glycine max HOM05D005890 ORTHO05D006717 1.0e-49 201.8 417 37.6
RcHm_v2.0_Chr4g0398981 Rosa chinensis HOM05D005890 ORTHO05D006717 1.8e-49 201.1 474 36.3
ClCG06G013720 Citrullus lanatus HOM05D005890 ORTHO05D006717 2.3e-49 200.7 443 38.6
Potri.006G073100 Populus trichocarpa HOM05D005890 ORTHO05D006717 5.1e-49 199.5 455 39.3
MELO3C006422.2 Cucumis melo HOM05D005890 ORTHO05D006717 1.1e-48 198.4 441 37.9
VMungo1215G0729 Vigna mungo HOM05D005890 ORTHO05D006717 1.5e-48 198.0 407 39.1
Phvul.003G140452 Phaseolus vulgaris HOM05D005890 ORTHO05D006717 2.5e-48 197.2 410 38.8
TWI32G1283 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 3.3e-48 196.8 484 36.6
Hma1.2p1_0235F.1_g098760 Hydrangea macrophylla HOM05D005890 ORTHO05D006717 4.3e-48 196.4 456 36.8
Rhsim01G0114500 Rhododendron simsii HOM05D005890 ORTHO05D006717 4.3e-48 196.4 485 36.3
Gohir.A05G408300 Gossypium hirsutum HOM05D005890 ORTHO05D006717 5.6e-48 196.1 419 40.1
Atru.chr7.926 Acer truncatum HOM05D005890 ORTHO05D006717 7.4e-48 195.7 174 67.2
Cc03_g15250 Coffea canephora HOM05D005890 ORTHO05D006717 7.4e-48 195.7 457 37.2
Prupe.1G073000 Prunus persica HOM05D005890 ORTHO05D006717 1.3e-47 194.9 468 38.7
Atru.BG.17.p Acer truncatum HOM05D005890 ORTHO05D006717 4.8e-47 193.0 416 40.9
Peaxi162Scf00046g00417 Petunia axillaris HOM05D005890 ORTHO05D006717 4.0e-46 189.9 434 37.6
Gorai.012G008900 Gossypium raimondii HOM05D005890 ORTHO05D006717 6.9e-46 189.1 422 39.8
PGR044G2166 Punica granatum HOM05D005890 ORTHO05D006717 1.5e-45 188.0 460 39.1
CsaV3_3G012070 Cucumis sativus L. HOM05D005890 ORTHO05D006717 2.6e-45 187.2 434 37.8
Sed0014693 Sechium edule HOM05D005890 ORTHO05D006717 5.8e-45 186.0 450 35.1
CSS0049336 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 7.6e-45 185.7 404 38.9
Nn8g40670 Nelumbo nucifera HOM05D005890 ORTHO05D006717 2.9e-44 183.7 544 36.8
TWI34G1560 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 1.1e-43 181.8 446 38.3
CAN.G403.1 Capsicum annuum HOM05D005890 ORTHO05D006717 1.4e-43 181.4 429 35.9
ECA240G0208 Erigeron canadensis HOM05D005890 ORTHO05D006717 1.4e-43 181.4 510 33.3
Oeu063100.1 Olea europaea HOM05D005890 ORTHO05D006717 2.5e-43 180.6 153 67.3
PGSC0003DMG400019897 Solanum tuberosum HOM05D005890 ORTHO05D006717 7.1e-43 179.1 421 38.7
HanXRQChr03g0065401 Helianthus annuus HOM05D005890 ORTHO05D006717 9.3e-43 178.7 424 38.9
Nitab4.5_0000028g0410 Nicotiana tabacum HOM05D005890 ORTHO05D006717 9.3e-43 178.7 415 36.9
arahy.Tifrunner.gnm1.ann1.CB00ZF Arachis hypogaea HOM05D005890 ORTHO05D006717 4.6e-42 176.4 412 37.4
Sopen07g004220 Solanum pennellii HOM05D005890 ORTHO05D006717 1.0e-41 175.3 421 38.2
Sed0024384 Sechium edule HOM05D005890 ORTHO05D006717 1.8e-41 174.5 463 34.1
Aqoxy7G02888 Aquilegia oxysepala HOM05D005890 ORTHO05D006717 5.1e-41 172.9 133 72.2
Solyc07g008330.3 Solanum lycopersicum HOM05D005890 ORTHO05D006717 1.1e-40 171.8 421 38.0
Sp6g18850 Schrenkiella parvula HOM05D005890 ORTHO05D006717 1.9e-40 171.0 412 36.7
unitig_8.g3553 Utricularia gibba HOM05D005890 ORTHO05D006717 1.9e-40 171.0 434 35.9
Actinidia02494 Actinidia chinensis HOM05D005890 ORTHO05D006717 2.5e-40 170.6 461 33.4
THA.LOC104813501 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 3.3e-40 170.2 420 36.2
AUR62027422 Chenopodium quinoa HOM05D005890 ORTHO05D006717 5.6e-40 169.5 417 37.2
arahy.Tifrunner.gnm1.ann1.V3N0NP Arachis hypogaea HOM05D005890 ORTHO05D006717 9.6e-40 168.7 412 36.9
MSTRG.26556 Avicennia marina HOM05D005890 ORTHO05D006717 1.3e-39 168.3 443 32.3
Haze_22044 Corylus avellana HOM05D005890 ORTHO05D006717 2.1e-39 167.5 198 56.1
AUR62031274 Chenopodium quinoa HOM05D005890 ORTHO05D006717 3.7e-39 166.8 152 61.8
Aa31LG3G13020 Aethionema arabicum HOM05D005890 ORTHO05D006717 6.2e-39 166.0 413 39.7
Nitab4.5_0004916g0020 Nicotiana tabacum HOM05D005890 ORTHO05D006717 8.2e-39 165.6 419 36.8
Hund24378 Selenicereus undatus HOM05D005890 ORTHO05D006717 8.2e-39 165.6 449 35.6
Migut.L01872 Erythranthe guttata HOM05D005890 ORTHO05D006717 1.4e-38 164.9 418 32.5
TPR.G5393 Trifolium pratense HOM05D005890 ORTHO05D006717 5.3e-38 162.9 412 36.4
vmacro20806 Vaccinium macrocarpon HOM05D005890 ORTHO05D006717 9.0e-38 162.2 582 32.3
Thhalv10013871m.g Eutrema salsugineum HOM05D005890 ORTHO05D006717 2.0e-37 161.0 415 37.3
HanXRQChr10g0308981 Helianthus annuus HOM05D005890 ORTHO05D006717 2.0e-37 161.0 143 62.9
Os12g0613500 Oryza sativa ssp. japonica HOM05D005890 ORTHO05D006717 3.4e-37 160.2 423 34.3
ECA234G0353 Erigeron canadensis HOM05D005890 ORTHO05D006717 5.8e-37 159.5 408 39.7
EL10Ac8g19296 Beta vulgaris HOM05D005890 ORTHO05D006717 2.2e-36 157.5 434 36.4
SGA_v2.0_scaffold41G15805 Striga asiatica HOM05D005890 ORTHO05D006717 2.2e-36 157.5 470 32.6
Psat4g014480 Pisum sativum HOM05D005890 ORTHO05D006717 2.9e-36 157.1 150 61.3
ATR1098G092 Amborella trichopoda HOM05D005890 ORTHO05D006717 4.9e-36 156.4 557 30.9
COL.COLO4_08570 Corchorus olitorius HOM05D005890 ORTHO05D006717 8.4e-36 155.6 545 31.2
BcaC03g14182 Brassica carinata HOM05D005890 ORTHO05D006717 1.1e-35 155.2 117 70.9
C02p14590 Brassica napus HOM05D005890 ORTHO05D006717 1.1e-35 155.2 117 70.9
BolC2t07586H Brassica oleracea HOM05D005890 ORTHO05D006717 1.1e-35 155.2 117 70.9
BcaB08g36002 Brassica carinata HOM05D005890 ORTHO05D006717 1.9e-35 154.5 119 68.9
CDE02G0471 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 1.9e-35 154.5 422 32.2
THA.LOC104817770 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 2.5e-35 154.1 441 34.9
TAR637G0001 Trochodendron aralioides HOM05D005890 ORTHO05D006717 2.5e-35 154.1 88 81.8
MBI18_g10586_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 4.2e-35 153.3 494 32.8
CARHR270890 Cardamine hirsuta HOM05D005890 ORTHO05D006717 7.1e-35 152.5 127 66.9
Lsat_1_v5_gn_7_55781 Lactuca sativa HOM05D005890 ORTHO05D006717 1.6e-34 151.4 415 35.7
BcaB05g22318 Brassica carinata HOM05D005890 ORTHO05D006717 3.5e-34 150.2 125 66.4
SGA_v2.0_scaffold392G50652 Striga asiatica HOM05D005890 ORTHO05D006717 3.5e-34 150.2 376 37.0
PSO170G0082 Papaver somniferum HOM05D005890 ORTHO05D006717 1.0e-33 148.7 122 63.1
BraA02t05941Z Brassica rapa HOM05D005890 ORTHO05D006717 1.8e-33 147.9 126 65.9
BcaC04g20011 Brassica carinata HOM05D005890 ORTHO05D006717 3.0e-33 147.1 120 66.7
A02p08710 Brassica napus HOM05D005890 ORTHO05D006717 3.0e-33 147.1 123 66.7
C09p48820 Brassica napus HOM05D005890 ORTHO05D006717 3.0e-33 147.1 120 66.7
BolC9t57729H Brassica oleracea HOM05D005890 ORTHO05D006717 3.0e-33 147.1 120 66.7
PSO063G0609 Papaver somniferum HOM05D005890 ORTHO05D006717 3.9e-33 146.7 407 36.4
Cpa.g.sc115.65 Carica papaya HOM05D005890 ORTHO05D006717 1.1e-32 145.2 143 57.3
Lsat_1_v5_gn_5_83860 Lactuca sativa HOM05D005890 ORTHO05D006717 1.5e-32 144.8 426 31.0
HPP92_018699 Vanilla planifolia HOM05D005890 ORTHO05D006717 3.3e-32 143.7 477 31.7
Ca_21262_v3 Cicer arietinum L. HOM05D005890 ORTHO05D006717 4.3e-32 143.3 419 32.0
MBI14_g15782_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 5.7e-32 142.9 187 49.7
SEGI_20539 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 7.4e-32 142.5 110 66.4
CDE05G3513 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 2.2e-31 141.0 410 32.0
Ah.14g085350 Amaranthus hybridus HOM05D005890 ORTHO05D006717 2.8e-31 140.6 411 30.9
Zm00001eb136110 Zea mays HOM05D005890 ORTHO05D006717 2.2e-28 131.0 490 28.0
Pp3c3_34440 Physcomitrium patens HOM05D005890 ORTHO05D006717 8.5e-28 129.0 124 57.3
Pp3c3_34441 Physcomitrium patens HOM05D005890 ORTHO05D006717 8.5e-28 129.0 124 57.3
Sabra18G0114500 Salix brachista HOM05D005890 ORTHO05D006717 1.6e-26 124.8 429 30.5
MD13G1240600 Malus domestica HOM05D005890 ORTHO05D006717 1.0e-25 122.1 439 35.5
AT5G57120 Arabidopsis thaliana HOM05D005890 ORTHO05D006717 1.1e-24 118.6 125 56.0
AagrBONN_evm.TU.Sc2ySwM_368.973 Anthoceros agrestis HOM05D005890 ORTHO05D006717 3.3e-24 117.1 177 41.2
CSS0049604 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 3.3e-24 117.1 229 41.9
Mapoly0009s0141 Marchantia polymorpha HOM05D005890 ORTHO05D006717 4.3e-24 116.7 127 48.0
Zm00001eb172010 Zea mays HOM05D005890 ORTHO05D006717 7.4e-24 115.9 140 52.1
FvH4_4g06950 Fragaria vesca HOM05D005890 ORTHO05D006717 3.7e-23 113.6 358 33.5
Carub.0008s1762 Capsella rubella HOM05D005890 ORTHO05D006717 1.8e-22 111.3 133 52.6
CBR_g20282 Chara braunii HOM05D000019 ORTHO05D000002 9.1e-22 109.0 73 67.1
AL8G33040 Arabidopsis lyrata HOM05D005890 ORTHO05D006717 2.0e-21 107.8 125 52.8
SEGI_22268 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 2.2e-20 104.4 60 78.3
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 1.9e-19 101.3 136 47.1
Gohir.D04G007200 Gossypium hirsutum HOM05D005890 ORTHO05D006717 2.8e-15 87.4 365 30.7
Cre01.g055400 Chlamydomonas reinhardtii HOM05D005890 ORTHO05D006717 9.1e-14 82.4 97 56.7
MCO09G065 Micromonas commoda HOM05D005890 ORTHO05D006717 3.8e-12 77.0 80 58.8
Zm00001eb394450 Zea mays HOM05D014690 ORTHO05D006717 5.0e-12 76.6 55 67.3
DCAR_029041 Daucus carota HOM05D005890 ORTHO05D006717 1.5e-11 75.1 209 32.5
A10p14440 Brassica napus HOM05D005890 ORTHO05D006717 3.3e-08 63.9 34 85.3
BraA10t43535Z Brassica rapa HOM05D005890 ORTHO05D006717 3.3e-08 63.9 34 85.3
Cpa.g.c33129.1 Carica papaya HOM05D005890 ORTHO05D006717 2.8e-07 60.8 93 43.0


User provided reference genes

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