Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G194300 Carya illinoinensis HOM05D007139 ORTHO05D009171 1.2e-92 343.2 176 100.0
Nn8g40530 Nelumbo nucifera HOM05D007139 ORTHO05D009171 3.2e-53 212.2 184 63.6
CiPaw.08G034800 Carya illinoinensis HOM05D007139 ORTHO05D009171 1.7e-51 206.5 186 64.0
FAN12G3123 Fragaria x ananassa HOM05D007139 ORTHO05D009171 1.6e-49 199.9 189 61.4
Potri.006G165800 Populus trichocarpa HOM05D007139 ORTHO05D009171 2.8e-49 199.1 185 62.7
FvH4_4g07780 Fragaria vesca HOM05D007139 ORTHO05D009171 4.7e-49 198.4 189 60.8
AUR62033234 Chenopodium quinoa HOM05D007139 ORTHO05D009171 1.2e-47 193.7 190 59.5
AUR62021317 Chenopodium quinoa HOM05D007139 ORTHO05D009171 1.7e-46 189.9 190 57.9
Sabra06G0127600 Salix brachista HOM05D007139 ORTHO05D009171 6.4e-46 188.0 195 56.4
RcHm_v2.0_Chr4g0400871 Rosa chinensis HOM05D007139 ORTHO05D009171 8.3e-46 187.6 194 57.7
CAN.G32.11 Capsicum annuum HOM05D007139 ORTHO05D009171 1.9e-45 186.4 187 59.4
FAN22G0146 Fragaria x ananassa HOM05D007139 ORTHO05D009171 3.2e-45 185.7 189 58.7
MELO3C004003.2 Cucumis melo HOM05D007139 ORTHO05D009171 4.6e-44 181.8 186 55.4
CDE07G0879 Ceratophyllum demersum HOM05D007139 ORTHO05D009171 1.3e-43 180.3 131 67.2
THA.LOC104813514 Tarenaya hassleriana HOM05D007139 ORTHO05D009171 3.9e-43 178.7 129 69.0
Ah.09g230020 Amaranthus hybridus HOM05D000263 ORTHO05D000213 5.0e-43 178.3 155 61.9
ATR0580G128 Amborella trichopoda HOM05D007139 ORTHO05D009171 6.6e-43 177.9 187 55.1
Ciclev10009657m.g Citrus clementina HOM05D007139 ORTHO05D009171 1.5e-42 176.8 186 57.5
TWI63G0338 Tripterygium wilfordii HOM05D007139 ORTHO05D009171 2.1e-41 172.9 186 57.5
QL11p005114 Quercus lobata HOM05D007139 ORTHO05D009171 2.8e-41 172.6 188 58.0
HPP92_017140 Vanilla planifolia HOM05D007139 ORTHO05D009171 1.4e-40 170.2 135 65.2
Psat0s3717g0080 Pisum sativum HOM05D007139 ORTHO05D009171 4.0e-40 168.7 193 54.4
GSVIVG01029235001 Vitis vinifera HOM05D007139 ORTHO05D009171 6.8e-40 167.9 187 54.5
MSTRG.6235 Avicennia marina HOM05D007139 ORTHO05D009171 8.9e-40 167.5 147 61.2
Thecc.09G178100 Theobroma cacao HOM05D007139 ORTHO05D009171 8.9e-40 167.5 186 55.9
Ah.14g083710 Amaranthus hybridus HOM05D007139 ORTHO05D009171 2.0e-39 166.4 188 51.6
Actinidia02506 Actinidia chinensis HOM05D007139 ORTHO05D009171 1.7e-38 163.3 194 53.1
COL.COLO4_06001 Corchorus olitorius HOM05D007139 ORTHO05D009171 1.7e-38 163.3 186 55.4
Manes.14G157565 Manihot esculenta HOM05D007139 ORTHO05D009171 1.7e-38 163.3 184 57.1
Cfa013405 Carpinus fangiana HOM05D007139 ORTHO05D009171 6.4e-38 161.4 188 55.3
ClCG11G011980 Citrullus lanatus HOM05D007139 ORTHO05D009171 6.4e-38 161.4 193 51.8
Cc06_g13070 Coffea canephora HOM05D007139 ORTHO05D009171 1.4e-37 160.2 161 59.0
Nitab4.5_0000055g0210 Nicotiana tabacum HOM05D007139 ORTHO05D009171 1.2e-36 157.1 186 53.2
Duzib168G1431 Durio zibethinus HOM05D007139 ORTHO05D009171 2.7e-36 156.0 184 53.8
Glyma.13G098100 Glycine max HOM05D007139 ORTHO05D009171 1.0e-35 154.1 188 53.2
Nitab4.5_0013636g0010 Nicotiana tabacum HOM05D007139 ORTHO05D009171 1.7e-35 153.3 186 52.7
FAN07G2196 Fragaria x ananassa HOM05D007139 ORTHO05D009171 8.6e-35 151.0 189 51.3
Peaxi162Scf01054g00025 Petunia axillaris HOM05D007139 ORTHO05D009171 8.6e-35 151.0 190 51.1
Cpa.g.c34934.2 Carica papaya HOM05D007139 ORTHO05D009171 1.1e-34 150.6 187 51.3
SEGI_32174 Sequoiadendron giganteum HOM05D007139 ORTHO05D009171 1.1e-34 150.6 141 56.7
Carub.0008s1786 Capsella rubella HOM05D007139 ORTHO05D009171 3.3e-34 149.1 191 49.7
FAN17G0841 Fragaria x ananassa HOM05D007139 ORTHO05D009171 3.3e-34 149.1 189 52.4
PSO063G4029 Papaver somniferum HOM05D007139 ORTHO05D009171 5.6e-34 148.3 199 49.2
A02p08570 Brassica napus HOM05D007139 ORTHO05D009171 7.3e-34 147.9 183 53.6
BraA02t05926Z Brassica rapa HOM05D007139 ORTHO05D009171 7.3e-34 147.9 183 53.6
Medtr4g127690 Medicago truncatula HOM05D007139 ORTHO05D009171 9.5e-34 147.5 177 50.8
Zm00001eb226320 Zea mays HOM05D007139 ORTHO05D009171 1.2e-33 147.1 195 50.3
CANSAT11G2567 Cannabis sativa HOM05D007139 ORTHO05D009171 1.6e-33 146.7 188 50.5
Ca_21240_v3 Cicer arietinum L. HOM05D007139 ORTHO05D009171 2.8e-33 146.0 117 69.2
TAR383G0430 Trochodendron aralioides HOM05D007139 ORTHO05D009171 3.6e-33 145.6 188 53.2
Lju50A10T16 Lonicera japonica HOM05D007139 ORTHO05D009171 4.7e-33 145.2 115 63.5
MD13G1247100 Malus domestica HOM05D007139 ORTHO05D009171 8.1e-33 144.4 180 52.8
PSO170G0255 Papaver somniferum HOM05D007139 ORTHO05D009171 1.4e-32 143.7 199 47.7
Rhsim01G0002000 Rhododendron simsii HOM05D007139 ORTHO05D009171 8.9e-32 141.0 189 51.3
EL10Ac8g18300 Beta vulgaris HOM05D007139 ORTHO05D009171 1.7e-30 136.7 186 46.2
Hma1.2p1_1086F.1_g255460 Hydrangea macrophylla HOM05D007139 ORTHO05D009171 1.7e-30 136.7 186 50.5
Eucgr.C02387 Eucalyptus grandis HOM05D007139 ORTHO05D009171 2.9e-30 136.0 131 58.8
Hund09038 Selenicereus undatus HOM05D007139 ORTHO05D009171 8.4e-30 134.4 179 44.7
TPR.G5382 Trifolium pratense HOM05D007139 ORTHO05D009171 1.1e-29 134.0 115 64.3
Gohir.A08G019100 Gossypium hirsutum HOM05D007139 ORTHO05D009171 1.4e-29 133.7 187 48.7
Migut.J01499 Erythranthe guttata HOM05D007139 ORTHO05D009171 2.4e-29 132.9 194 45.9
Atru.chr7.836 Acer truncatum HOM05D007139 ORTHO05D009171 7.1e-29 131.3 136 60.3
Glyma.17G061600 Glycine max HOM05D007139 ORTHO05D009171 7.1e-29 131.3 179 48.6
VMungo1215G0446 Vigna mungo HOM05D007139 ORTHO05D009171 7.1e-29 131.3 161 50.9
Hund09039 Selenicereus undatus HOM05D007139 ORTHO05D009171 9.2e-29 131.0 188 46.3
Gohir.D08G029700 Gossypium hirsutum HOM05D007139 ORTHO05D009171 1.6e-28 130.2 187 48.7
Gorai.004G027200 Gossypium raimondii HOM05D007139 ORTHO05D009171 1.6e-28 130.2 187 48.7
Aqoxy7G02982 Aquilegia oxysepala HOM05D007139 ORTHO05D009171 2.7e-28 129.4 185 47.6
Haze_21948 Corylus avellana HOM05D007139 ORTHO05D009171 6.0e-28 128.3 102 70.6
Dinv19561 Davidia involucrata HOM05D007139 ORTHO05D009171 7.8e-28 127.9 188 50.0
Lalb_Chr12g0199481 Lupinus albus HOM05D007139 ORTHO05D009171 1.3e-27 127.1 191 49.2
Lj4g0008370 Lotus japonicus HOM05D007139 ORTHO05D009171 3.9e-27 125.6 169 47.9
PGR044G0070 Punica granatum HOM05D007139 ORTHO05D009171 3.9e-27 125.6 189 45.5
Oeu025690.1 Olea europaea HOM05D007139 ORTHO05D009171 6.6e-27 124.8 182 47.8
Phvul.003G143600 Phaseolus vulgaris HOM05D007139 ORTHO05D009171 1.9e-26 123.2 186 45.2
MBI14_g08139_MAGBIO Magnolia biondii HOM05D007139 ORTHO05D009171 4.3e-26 122.1 184 43.5
arahy.Tifrunner.gnm1.ann1.832R2S Arachis hypogaea HOM05D007139 ORTHO05D009171 1.1e-24 117.5 165 45.5
Gorai.009G004000 Gossypium raimondii HOM05D007139 ORTHO05D009171 5.2e-24 115.2 168 45.2
Thhalv10014766m.g Eutrema salsugineum HOM05D007139 ORTHO05D009171 6.9e-24 114.8 183 43.7
Sopen07g006630 Solanum pennellii HOM05D007139 ORTHO05D009171 9.0e-24 114.4 186 44.6
A10p14810 Brassica napus HOM05D007139 ORTHO05D009171 1.2e-23 114.0 117 57.3
ECA234G0508 Erigeron canadensis HOM05D007139 ORTHO05D009171 1.5e-23 113.6 193 44.6
Gohir.D05G004250 Gossypium hirsutum HOM05D007139 ORTHO05D009171 2.0e-23 113.2 180 42.8
Sc18g0007530 Simmondsia chinensis HOM05D007139 ORTHO05D009171 2.0e-23 113.2 137 49.6
vmacro13142 Vaccinium macrocarpon HOM05D007139 ORTHO05D009171 7.6e-23 111.3 189 43.4
Sed0022431 Sechium edule HOM05D007139 ORTHO05D009171 2.2e-22 109.8 188 44.1
AL8G33320 Arabidopsis lyrata HOM05D007139 ORTHO05D009171 6.4e-22 108.2 186 43.5
AT5G57345 Arabidopsis thaliana HOM05D007139 ORTHO05D009171 8.4e-22 107.8 186 44.6
CARHR271140 Cardamine hirsuta HOM05D007139 ORTHO05D009171 1.4e-21 107.1 185 44.3
BcaB05g22339 Brassica carinata HOM05D007139 ORTHO05D009171 1.9e-21 106.7 185 43.2
arahy.Tifrunner.gnm1.ann1.N1BBZF Arachis hypogaea HOM05D007139 ORTHO05D009171 2.4e-21 106.3 150 45.3
CsaV3_2G008540 Cucumis sativus L. HOM05D007139 ORTHO05D009171 2.1e-20 103.2 129 51.9
Duzib150G0167 Durio zibethinus HOM05D007139 ORTHO05D009171 2.1e-20 103.2 184 44.0
SGA_v2.0_scaffold66G22428 Striga asiatica HOM05D007139 ORTHO05D009171 2.1e-20 103.2 193 41.5
Aa31LG3G13220 Aethionema arabicum HOM05D007139 ORTHO05D009171 3.5e-20 102.4 125 53.6
Lsat_1_v5_gn_5_85520 Lactuca sativa HOM05D007139 ORTHO05D009171 2.3e-19 99.8 195 42.6
HanXRQChr12g0384691 Helianthus annuus HOM05D007139 ORTHO05D009171 6.6e-19 98.2 194 42.8
Os06g0694800 Oryza sativa ssp. japonica HOM05D007139 ORTHO05D009171 1.5e-18 97.1 177 41.2
BcaC03g14161 Brassica carinata HOM05D007139 ORTHO05D009171 2.5e-18 96.3 186 43.0
DCAR_020130 Daucus carota HOM05D007139 ORTHO05D009171 5.6e-18 95.1 132 48.5
Gohir.A05G003850 Gossypium hirsutum HOM05D007139 ORTHO05D009171 4.2e-13 79.0 114 47.4
Lsat_1_v5_gn_1_19521 Lactuca sativa HOM05D007139 ORTHO05D009171 4.2e-13 79.0 127 39.4
BraA10t43560Z Brassica rapa HOM05D007139 ORTHO05D009171 5.1e-11 72.0 51 66.7
CBR_g22376 Chara braunii HOM05D007139 ORTHO05D009171 9.6e-10 67.8 123 39.0
Haze_21949 Corylus avellana HOM05D007139 ORTHO05D009171 1.2e-07 60.8 81 45.7


User provided reference genes

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