Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 2.3e-254 881.7 441 100.0
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 4.2e-171 605.1 374 79.4
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 9.0e-166 587.4 367 79.8
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 2.0e-157 559.7 386 72.0
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 6.5e-156 554.7 384 71.4
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 1.4e-155 553.5 387 73.4
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 6.7e-153 544.7 384 70.1
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 1.1e-152 543.9 386 70.2
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 4.4e-152 542.0 394 69.8
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 1.1e-150 537.3 391 71.4
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 1.4e-150 537.0 366 71.0
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 1.8e-150 536.6 389 69.2
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 9.1e-150 534.3 376 71.5
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 3.5e-149 532.3 385 69.1
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 1.3e-148 530.4 387 69.0
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 9.4e-147 524.2 386 68.7
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 1.4e-145 520.4 385 69.1
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 5.2e-145 518.5 385 68.6
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 3.3e-144 515.8 368 69.0
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 7.4e-144 514.6 371 69.3
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 2.8e-143 512.7 383 68.4
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 3.1e-142 509.2 388 66.5
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 4.1e-142 508.8 388 66.5
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 5.3e-142 508.4 383 66.8
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 1.2e-141 507.3 397 65.7
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 3.5e-141 505.8 386 67.4
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 3.5e-141 505.8 383 68.7
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 3.5e-141 505.8 385 68.1
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 3.2e-139 499.2 387 63.6
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 3.2e-139 499.2 372 67.7
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 5.5e-139 498.4 295 82.7
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 1.2e-138 497.3 389 65.8
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 8.0e-138 494.6 405 63.7
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 1.0e-137 494.2 385 64.9
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 1.2e-136 490.7 386 64.8
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 1.2e-136 490.7 385 63.4
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 1.2e-136 490.7 371 68.7
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 2.2e-135 486.5 374 66.3
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 2.8e-135 486.1 391 64.5
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 2.4e-134 483.0 381 65.1
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 7.0e-134 481.5 312 77.2
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 1.6e-133 480.3 385 64.7
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 7.7e-133 478.0 380 64.5
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 2.9e-132 476.1 393 63.6
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 5.0e-132 475.3 383 64.8
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 7.2e-131 471.5 393 59.8
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 2.1e-130 469.9 353 66.3
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 3.6e-130 469.2 380 63.9
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 4.4e-128 462.2 386 63.0
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 5.7e-128 461.8 375 62.7
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 9.8e-128 461.1 373 63.8
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 1.3e-127 460.7 381 61.4
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 1.3e-127 460.7 380 63.7
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 1.4e-126 457.2 391 62.1
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 4.1e-126 455.7 374 63.6
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 9.1e-126 454.5 438 56.4
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 1.6e-125 453.8 369 64.5
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 1.0e-124 451.1 372 63.2
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 3.3e-123 446.0 372 62.1
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 9.5e-123 444.5 378 58.2
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 1.6e-122 443.7 372 62.1
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 2.1e-122 443.4 372 62.4
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 4.7e-122 442.2 355 62.5
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 1.4e-121 440.7 363 60.3
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 8.9e-121 438.0 359 60.4
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 2.8e-119 433.0 389 55.5
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 3.7e-119 432.6 368 60.9
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 1.1e-118 431.0 369 61.2
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 1.4e-118 430.6 381 61.4
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 1.8e-118 430.3 369 60.4
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 3.2e-118 429.5 369 61.2
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 7.0e-118 428.3 368 59.8
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 9.2e-118 427.9 368 60.3
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 9.2e-118 427.9 364 59.9
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 1.2e-117 427.6 368 60.3
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 3.5e-117 426.0 358 60.1
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 4.5e-117 425.6 368 60.1
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 1.0e-116 424.5 376 59.3
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 1.7e-116 423.7 371 58.8
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 3.9e-116 422.5 346 62.7
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 1.2e-114 417.5 365 58.6
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 1.2e-114 417.5 378 58.7
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 1.6e-114 417.2 335 63.0
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 1.4e-113 414.1 370 57.3
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 5.8e-112 408.7 354 57.9
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 1.1e-110 404.4 356 57.9
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 2.4e-110 403.3 447 50.8
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 2.0e-109 400.2 291 67.7
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.3e-108 397.5 275 72.0
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 1.8e-105 387.1 262 72.9
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 1.5e-104 384.0 280 67.5
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 1.6e-101 374.0 238 76.9
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 2.5e-99 366.7 287 63.1
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 7.3e-99 365.2 281 63.7
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 3.6e-98 362.8 395 48.9
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 2.2e-95 353.6 312 60.3
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 2.7e-93 346.7 238 72.7
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 5.6e-91 339.0 253 67.6
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 2.8e-90 336.7 303 55.4
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 1.3e-87 327.8 369 49.3
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 4.6e-85 319.3 337 48.1
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 3.0e-84 316.6 181 79.6
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 2.2e-79 300.4 171 80.1
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 6.4e-79 298.9 303 51.8
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 2.4e-78 297.0 341 49.6
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 5.1e-76 289.3 304 53.3
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 1.6e-61 241.1 186 65.6
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 1.9e-59 234.2 254 47.6
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 1.3e-47 194.9 137 64.2
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 8.5e-47 192.2 274 42.0
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 3.9e-44 183.3 263 40.7
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 6.5e-39 166.0 140 60.7
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 1.9e-38 164.5 188 47.3
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 2.8e-34 150.6 204 41.7
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 5.3e-25 119.8 71 81.7
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 4.7e-21 106.7 116 50.0
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 1.2e-11 75.5 55 65.5
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 7.5e-11 72.8 67 52.2
Nn2g16007 Nelumbo nucifera HOM05D006491 ORTHO05D008412 1.9e-06 58.2 58 60.3


User provided reference genes

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