Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G186400 Carya illinoinensis HOM05D011714 ORTHO05D011286 1.1e-41 172.9 89 100.0
QL02p095571 Quercus lobata HOM05D013360 ORTHO05D011286 2.2e-26 122.1 88 72.7
Haze_22172 Corylus avellana HOM05D011714 ORTHO05D011286 8.5e-23 110.2 86 68.6
CiPaw.08G040500 Carya illinoinensis HOM05D011714 ORTHO05D011286 1.2e-21 106.3 90 71.1
Cfa013551 Carpinus fangiana HOM05D011714 ORTHO05D011286 1.1e-17 93.2 74 66.2
Atru.chr7.482 Acer truncatum HOM05D011714 ORTHO05D011286 7.2e-14 80.5 91 53.8
Prupe.1G097700 Prunus persica HOM05D022430 ORTHO05D011286 1.2e-13 79.7 91 50.5
TAR383G0052 Trochodendron aralioides HOM05D011714 ORTHO05D011286 2.1e-13 79.0 78 46.2
Lalb_Chr07g0180061 Lupinus albus HOM05D013360 ORTHO05D011286 8.0e-13 77.0 89 48.3
Thecc.09G160300 Theobroma cacao HOM05D011714 ORTHO05D011286 1.8e-12 75.9 87 54.0
COL.COLO4_06805 Corchorus olitorius HOM05D011714 ORTHO05D011286 1.2e-11 73.2 92 46.7
Duzib187G0715 Durio zibethinus HOM05D011714 ORTHO05D011286 1.3e-10 69.7 97 48.5
Lalb_Chr13g0300551 Lupinus albus HOM05D013360 ORTHO05D011286 6.3e-10 67.4 89 43.8
FAN08G1756 Fragaria x ananassa HOM05D022430 ORTHO05D011286 8.3e-10 67.0 92 46.7
RcHm_v2.0_Chr4g0404971 Rosa chinensis HOM05D022430 ORTHO05D011286 8.3e-10 67.0 92 47.8
Gohir.D04G086400 Gossypium hirsutum HOM05D011714 ORTHO05D011286 1.4e-09 66.2 87 51.7
Gorai.012G096300 Gossypium raimondii HOM05D011714 ORTHO05D011286 1.4e-09 66.2 87 51.7
Phvul.003G151400 Phaseolus vulgaris HOM05D013360 ORTHO05D011286 2.4e-09 65.5 81 44.4
Medtr4g129580 Medicago truncatula HOM05D013360 ORTHO05D011286 5.4e-09 64.3 81 44.4
Glyma.13G091400 Glycine max HOM05D013360 ORTHO05D011286 3.5e-08 61.6 85 44.7
FAN17G1930 Fragaria x ananassa HOM05D022430 ORTHO05D011286 4.5e-08 61.2 92 44.6
Nn2g12547 Nelumbo nucifera HOM05D011714 ORTHO05D011286 5.9e-08 60.8 87 39.1
Glyma.17G068900 Glycine max HOM05D013360 ORTHO05D011286 1.7e-07 59.3 85 43.5
Aqoxy7G03244 Aquilegia oxysepala HOM05D011714 ORTHO05D011286 2.3e-07 58.9 78 39.7
Rhsim01G0012500 Rhododendron simsii HOM05D022430 ORTHO05D011286 2.9e-07 58.5 71 43.7
Nn2g12542 Nelumbo nucifera HOM05D011714 ORTHO05D011286 8.6e-07 57.0 86 44.2
Nn2g12543 Nelumbo nucifera HOM05D011714 ORTHO05D011286 1.5e-06 56.2 85 48.2
Glyma.12G162954 Glycine max HOM05D013360 ORTHO05D011286 1.9e-06 55.8 74 44.6
Cpa.g.sc75.21 Carica papaya HOM05D013360 ORTHO05D011286 2.5e-06 55.5 89 39.3


User provided reference genes

Program Settings