Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 2.8e-287 991.1 461 100.0
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 5.8e-264 913.7 476 88.7
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 1.1e-262 909.4 461 91.1
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 3.2e-262 907.9 461 90.7
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 1.6e-261 905.6 461 90.7
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.0e-260 902.9 461 88.9
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 2.3e-260 901.7 461 88.9
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 5.0e-260 900.6 461 88.7
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 6.6e-260 900.2 461 89.8
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 8.6e-260 899.8 461 89.2
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.5e-259 899.0 461 88.7
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 7.3e-259 896.7 461 90.0
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 7.3e-259 896.7 461 90.2
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 2.1e-258 895.2 461 88.7
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 3.6e-258 894.4 461 89.8
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 6.2e-258 893.6 462 89.6
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 1.8e-257 892.1 461 89.6
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 4.0e-257 891.0 461 89.8
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 5.2e-257 890.6 461 89.2
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 6.8e-257 890.2 460 88.7
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 6.8e-257 890.2 460 88.7
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 8.9e-257 889.8 461 87.4
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 8.9e-257 889.8 461 90.0
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 8.9e-257 889.8 461 89.6
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 1.2e-256 889.4 461 90.0
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 2.0e-256 888.6 461 89.4
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 3.4e-256 887.9 461 87.6
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 4.4e-256 887.5 461 88.7
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 5.8e-256 887.1 462 88.5
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 5.8e-256 887.1 461 88.9
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 5.8e-256 887.1 461 88.1
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 2.2e-255 885.2 461 89.4
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 2.2e-255 885.2 461 87.6
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 2.9e-255 884.8 461 88.1
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 6.4e-255 883.6 461 87.2
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 5.4e-254 880.6 461 87.9
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 6.6e-252 873.6 461 88.3
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 9.5e-251 869.8 482 84.6
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 1.6e-250 869.0 461 85.7
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 1.6e-250 869.0 461 85.7
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 4.0e-249 864.4 461 87.0
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 2.0e-248 862.1 461 86.3
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 1.3e-247 859.4 461 87.2
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 8.4e-247 856.7 459 84.5
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 8.4e-247 856.7 461 83.7
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 8.4e-247 856.7 461 83.9
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 2.4e-246 855.1 461 86.3
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 2.1e-245 852.0 461 83.5
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 2.1e-245 852.0 461 83.5
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 5.1e-244 847.4 461 83.3
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 6.6e-244 847.0 462 82.9
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 2.5e-243 845.1 461 83.5
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 1.6e-242 842.4 458 83.2
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 2.1e-242 842.0 462 83.5
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 2.8e-242 841.6 461 82.9
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 6.2e-242 840.5 461 82.6
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 6.2e-242 840.5 461 85.7
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 8.1e-242 840.1 461 83.1
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 4.0e-241 837.8 461 82.4
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 5.2e-241 837.4 460 82.8
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 6.8e-241 837.0 461 82.4
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 6.8e-241 837.0 461 82.6
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 4.9e-239 830.9 461 82.0
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 8.4e-239 830.1 459 81.5
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 9.3e-238 826.6 461 81.6
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 2.7e-237 825.1 456 82.2
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 2.3e-236 822.0 461 83.3
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 6.6e-236 820.5 461 80.9
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 4.3e-235 817.8 461 82.0
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 9.6e-235 816.6 461 82.2
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 1.3e-234 816.2 459 80.8
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 1.6e-234 815.8 461 81.1
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 2.1e-234 815.5 461 83.1
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 4.8e-234 814.3 488 77.0
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 6.9e-233 810.4 443 82.2
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 3.4e-232 808.1 461 82.9
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 7.6e-232 807.0 499 77.0
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 2.7e-229 798.5 461 79.4
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 1.6e-226 789.3 461 80.3
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 8.4e-223 776.9 465 75.7
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 1.2e-221 773.1 464 75.9
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 2.1e-221 772.3 461 77.7
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 1.5e-208 729.6 499 69.3
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 5.0e-207 724.5 458 74.2
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 5.1e-204 714.5 461 73.1
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 7.2e-198 694.1 393 80.2
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 5.1e-196 688.0 458 67.7
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 2.5e-195 685.6 341 93.3
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.0e-191 673.7 338 91.1
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.1e-190 670.2 451 65.6
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.0e-188 663.7 339 90.3
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.4e-188 663.3 451 65.6
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.9e-188 661.8 339 90.3
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 6.7e-188 661.0 338 89.9
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 2.6e-187 659.1 456 64.9
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 1.1e-185 653.7 342 89.2
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 1.1e-185 653.7 342 89.2
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 2.7e-181 639.0 323 90.4
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 1.0e-180 637.1 468 60.7
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 2.2e-178 629.4 338 85.5
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 9.1e-177 624.0 337 84.6
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.4e-172 610.1 311 90.4
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 2.2e-170 602.8 337 81.9
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 8.8e-164 580.9 462 55.4
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 7.0e-153 544.7 292 87.3
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 1.6e-152 543.5 337 76.3
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 2.7e-152 542.7 295 84.4
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 2.7e-152 542.7 291 84.5
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 1.9e-150 536.6 309 81.6
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 3.9e-143 512.3 277 82.7
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 1.9e-137 493.4 339 64.6
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 4.0e-132 475.7 280 77.9
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 4.5e-107 392.5 450 40.9
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 1.9e-97 360.5 488 37.1
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 1.2e-75 288.1 161 80.7
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.5e-59 233.4 110 96.4
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.5e-59 233.4 110 96.4
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 7.7e-59 232.3 110 95.5
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 2.0e-54 217.6 163 63.8
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 7.3e-41 172.6 98 82.7
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 1.9e-12 78.2 40 85.0


User provided reference genes

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