Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G174600 Carya illinoinensis HOM05D006958 ORTHO05D008814 3.6e-194 681.4 346 100.0
Cfa013775 Carpinus fangiana HOM05D006958 ORTHO05D008814 6.9e-161 570.9 347 83.0
Haze_22433 Corylus avellana HOM05D006958 ORTHO05D008814 4.6e-157 558.1 346 81.5
QL12p038133 Quercus lobata HOM05D006958 ORTHO05D008814 8.2e-146 520.8 345 75.9
Atru.chr13.835 Acer truncatum HOM05D006958 ORTHO05D008814 1.8e-132 476.5 345 70.7
Thecc.08G088500 Theobroma cacao HOM05D006958 ORTHO05D008814 1.7e-130 469.9 345 68.7
Manes.18G046700 Manihot esculenta HOM05D006958 ORTHO05D008814 1.8e-129 466.5 350 68.6
Prupe.1G422600 Prunus persica HOM05D006958 ORTHO05D008814 1.5e-128 463.4 348 67.5
TWI12G1073 Tripterygium wilfordii HOM05D006958 ORTHO05D008814 1.5e-128 463.4 348 67.0
Gorai.009G220300 Gossypium raimondii HOM05D006958 ORTHO05D008814 2.6e-128 462.6 345 67.0
CANSAT25G3409 Cannabis sativa HOM05D006958 ORTHO05D008814 1.3e-127 460.3 348 65.5
Gohir.D05G213600 Gossypium hirsutum HOM05D006958 ORTHO05D008814 3.8e-127 458.8 347 66.6
COL.COLO4_28503 Corchorus olitorius HOM05D006958 ORTHO05D008814 1.2e-125 453.8 343 67.3
MD15G1069100 Malus domestica HOM05D006958 ORTHO05D008814 6.1e-125 451.4 349 67.3
Duzib093G1923 Durio zibethinus HOM05D006958 ORTHO05D008814 7.9e-125 451.1 345 67.2
Actinidia10201 Actinidia chinensis HOM05D006958 ORTHO05D008814 2.3e-124 449.5 348 68.4
Dinv39219 Davidia involucrata HOM05D006958 ORTHO05D008814 1.1e-123 447.2 348 66.7
RcHm_v2.0_Chr6g0309651 Rosa chinensis HOM05D006958 ORTHO05D008814 1.3e-122 443.7 347 65.4
Ciclev10001733m.g Citrus clementina HOM05D006958 ORTHO05D008814 1.7e-122 443.4 343 66.5
ClCG08G016520 Citrullus lanatus HOM05D006958 ORTHO05D008814 2.4e-121 439.5 346 64.7
TAR376G0445 Trochodendron aralioides HOM05D006958 ORTHO05D008814 1.2e-120 437.2 355 64.2
Rhsim06G0062400 Rhododendron simsii HOM05D006958 ORTHO05D008814 1.5e-120 436.8 348 65.8
CsaV3_2G026090 Cucumis sativus L. HOM05D006958 ORTHO05D008814 1.2e-117 427.2 348 63.5
Potri.002G118300 Populus trichocarpa HOM05D006958 ORTHO05D008814 1.2e-117 427.2 345 64.1
FAN27G0228 Fragaria x ananassa HOM05D006958 ORTHO05D008814 3.6e-117 425.6 351 63.2
Actinidia22696 Actinidia chinensis HOM05D006958 ORTHO05D008814 8.0e-117 424.5 346 64.5
Eucgr.F02250 Eucalyptus grandis HOM05D006958 ORTHO05D008814 3.0e-116 422.5 349 61.0
Sed0002112 Sechium edule HOM05D006958 ORTHO05D008814 3.9e-116 422.2 346 63.0
FvH4_2g33060 Fragaria vesca HOM05D006958 ORTHO05D008814 5.2e-116 421.8 347 63.4
FAN15G0662 Fragaria x ananassa HOM05D006958 ORTHO05D008814 5.2e-116 421.8 347 63.1
FAN24G2490 Fragaria x ananassa HOM05D006958 ORTHO05D008814 6.7e-116 421.4 351 63.0
CSS0020437 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 4.4e-115 418.7 350 64.9
THA.LOC104816754 Tarenaya hassleriana HOM05D006958 ORTHO05D008814 1.3e-114 417.2 343 62.4
MELO3C010802.2 Cucumis melo HOM05D006958 ORTHO05D008814 5.3e-113 411.8 348 61.2
FAN20G1263 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.2e-112 410.6 363 60.3
PGR031G1511 Punica granatum HOM05D006958 ORTHO05D008814 2.6e-112 409.5 342 59.9
CSS0026693 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 5.5e-110 401.7 350 63.4
Lalb_Chr14g0368181 Lupinus albus HOM05D006958 ORTHO05D008814 4.7e-109 398.7 341 62.8
Cpa.g.sc142.28 Carica papaya HOM05D006958 ORTHO05D008814 1.8e-108 396.7 277 70.0
Gohir.A05G210300 Gossypium hirsutum HOM05D006958 ORTHO05D008814 4.4e-107 392.1 279 68.8
arahy.Tifrunner.gnm1.ann1.JFD9T8 Arachis hypogaea HOM05D006958 ORTHO05D008814 9.7e-107 391.0 338 61.5
Thhalv10023590m.g Eutrema salsugineum HOM05D006958 ORTHO05D008814 1.1e-105 387.5 344 59.6
CARHR283790 Cardamine hirsuta HOM05D006958 ORTHO05D008814 5.9e-104 381.7 345 59.4
MBI16_g23890_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D008814 5.9e-104 381.7 354 58.8
Migut.N02783 Erythranthe guttata HOM05D006958 ORTHO05D008814 7.7e-104 381.3 344 59.0
Sc02g0007890 Simmondsia chinensis HOM05D006958 ORTHO05D008814 2.2e-103 379.8 341 58.7
SGA_v2.0_scaffold28G11833 Striga asiatica HOM05D006958 ORTHO05D008814 2.9e-103 379.4 348 58.3
AT1G59600 Arabidopsis thaliana HOM05D006958 ORTHO05D008814 1.5e-102 377.1 345 58.6
AL2G17470 Arabidopsis lyrata HOM05D006958 ORTHO05D008814 1.9e-102 376.7 345 59.1
Sopen04g031420 Solanum pennellii HOM05D006958 ORTHO05D008814 2.5e-102 376.3 346 57.2
Nitab4.5_0002484g0050 Nicotiana tabacum HOM05D006958 ORTHO05D008814 5.5e-102 375.2 344 57.6
Sp2g04980 Schrenkiella parvula HOM05D006958 ORTHO05D008814 2.1e-101 373.2 344 57.3
Nitab4.5_0004654g0020 Nicotiana tabacum HOM05D006958 ORTHO05D008814 2.7e-101 372.9 344 57.3
Solyc04g077820.4 Solanum lycopersicum HOM05D006958 ORTHO05D008814 4.7e-101 372.1 344 56.7
Carub.0002s0585 Capsella rubella HOM05D006958 ORTHO05D008814 2.3e-100 369.8 345 58.8
Hund05299 Selenicereus undatus HOM05D006958 ORTHO05D008814 2.6e-99 366.3 352 58.2
C01p36350 Brassica napus HOM05D006958 ORTHO05D008814 3.4e-99 365.9 342 56.7
Lj5g0000926 Lotus japonicus HOM05D006958 ORTHO05D008814 1.3e-98 364.0 337 57.3
TPR.G37796 Trifolium pratense HOM05D006958 ORTHO05D008814 2.2e-98 363.2 342 57.9
Lj4A758G77 Lonicera japonica HOM05D006958 ORTHO05D008814 3.7e-98 362.5 386 52.3
BolC1t03593H Brassica oleracea HOM05D006958 ORTHO05D008814 6.3e-98 361.7 343 56.6
Aa31LG2G10550 Aethionema arabicum HOM05D006958 ORTHO05D008814 5.4e-97 358.6 427 48.5
A01p28700 Brassica napus HOM05D006958 ORTHO05D008814 5.4e-97 358.6 348 56.0
Ca_13215_v3 Cicer arietinum L. HOM05D006958 ORTHO05D008814 5.4e-97 358.6 348 56.9
MSTRG.24376 Avicennia marina HOM05D006958 ORTHO05D008814 7.0e-97 358.2 346 55.2
BraA01t03033Z Brassica rapa HOM05D006958 ORTHO05D008814 2.0e-96 356.7 348 55.7
PGSC0003DMG400010608 Solanum tuberosum HOM05D006958 ORTHO05D008814 2.9e-95 352.8 357 54.1
arahy.Tifrunner.gnm1.ann1.8TQ0W2 Arachis hypogaea HOM05D006958 ORTHO05D008814 6.6e-95 351.7 337 57.9
CAN.G724.27 Capsicum annuum HOM05D006958 ORTHO05D008814 1.5e-94 350.5 337 55.5
Glyma.14G089018 Glycine max HOM05D006958 ORTHO05D008814 9.5e-94 347.8 336 58.6
HanXRQChr08g0229631 Helianthus annuus HOM05D006958 ORTHO05D008814 2.1e-93 346.7 346 56.4
Lsat_1_v5_gn_6_110920 Lactuca sativa HOM05D006958 ORTHO05D008814 2.8e-93 346.3 358 55.0
PSO541G2153 Papaver somniferum HOM05D006958 ORTHO05D008814 1.0e-92 344.4 351 52.7
Phvul.001G028000 Phaseolus vulgaris HOM05D006958 ORTHO05D008814 2.3e-92 343.2 337 56.4
BcaB04g20216 Brassica carinata HOM05D006958 ORTHO05D008814 6.8e-92 341.7 347 54.5
ATR0739G011 Amborella trichopoda HOM05D006958 ORTHO05D008814 8.9e-92 341.3 350 54.0
PSO675G0096 Papaver somniferum HOM05D006958 ORTHO05D008814 2.0e-91 340.1 353 51.6
Peaxi162Scf00081g02114 Petunia axillaris HOM05D006958 ORTHO05D008814 2.0e-91 340.1 346 52.3
DCAR_020049 Daucus carota HOM05D006958 ORTHO05D008814 2.0e-88 330.1 337 55.2
Medtr1g018000 Medicago truncatula HOM05D006958 ORTHO05D008814 2.0e-88 330.1 342 54.4
Aqoxy6G02602 Aquilegia oxysepala HOM05D006958 ORTHO05D008814 2.9e-87 326.2 345 51.9
EL10Ac1g02379 Beta vulgaris HOM05D006958 ORTHO05D008814 5.0e-87 325.5 279 59.5
PSO541G3524 Papaver somniferum HOM05D006958 ORTHO05D008814 1.1e-86 324.3 306 54.9
VMungo0647G0836 Vigna mungo HOM05D006958 ORTHO05D008814 5.2e-84 315.5 335 51.6
HPP92_009523 Vanilla planifolia HOM05D006958 ORTHO05D008814 2.9e-82 309.7 343 50.4
ECA246G2880 Erigeron canadensis HOM05D006958 ORTHO05D008814 1.2e-80 304.3 287 57.5
unitig_744.g24127 Utricularia gibba HOM05D006958 ORTHO05D008814 2.7e-80 303.1 341 50.1
GSVIVG01009341001 Vitis vinifera HOM05D006958 ORTHO05D008814 3.0e-79 299.7 212 73.6
Cc10_g05800 Coffea canephora HOM05D006958 ORTHO05D008814 8.3e-74 281.6 212 68.4
Zm00001eb325900 Zea mays HOM05D006958 ORTHO05D008814 4.6e-72 275.8 343 44.9
CDE04G0359 Ceratophyllum demersum HOM05D006958 ORTHO05D008814 2.3e-55 220.3 239 52.7
Psat6g018160 Pisum sativum HOM05D006958 ORTHO05D008814 1.4e-49 201.1 301 45.8
AUR62022479 Chenopodium quinoa HOM05D006958 ORTHO05D008814 7.1e-49 198.7 176 56.2
Oeu049903.1 Olea europaea HOM05D006958 ORTHO05D008814 1.7e-47 194.1 179 54.7
Pp3c12_1620 Physcomitrium patens HOM05D006958 ORTHO05D008814 7.3e-46 188.7 325 35.4
HPP92_009559 Vanilla planifolia HOM05D006958 ORTHO05D008814 7.1e-41 172.2 185 50.8
arahy.Tifrunner.gnm1.ann1.D1UQZZ Arachis hypogaea HOM05D006958 ORTHO05D008814 1.6e-40 171.0 271 42.1
Cfa010280 Carpinus fangiana HOM05D006958 ORTHO05D008814 1.5e-35 154.5 93 80.6
Os01g0593100 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 9.9e-35 151.8 197 45.2
Os07g0586000 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 7.1e-33 145.6 168 45.2
SMO334G0101 Selaginella moellendorffii HOM05D006958 ORTHO05D008814 3.0e-31 140.2 268 33.6
CBR_g51257 Chara braunii HOM05D006958 ORTHO05D008814 1.1e-28 131.7 346 31.8
SEGI_02529 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 2.6e-27 127.1 168 38.7
BolC4t24190H Brassica oleracea HOM05D006958 ORTHO05D008814 5.8e-27 125.9 132 54.5
AUR62022480 Chenopodium quinoa HOM05D006958 ORTHO05D008814 1.1e-25 121.7 128 53.9
MBI15_g25904_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D017181 1.3e-23 114.8 125 55.2
C04p26140 Brassica napus HOM05D006958 ORTHO05D008814 6.9e-20 102.4 110 51.8
BcaC02g10644 Brassica carinata HOM05D006958 ORTHO05D008814 1.5e-19 101.3 208 37.0
Psat7g107960 Pisum sativum HOM05D006958 ORTHO05D008814 2.7e-16 90.5 98 46.9
Glyma.07G264001 Glycine max HOM05D006958 ORTHO05D008814 1.8e-12 77.8 75 56.0
SEGI_26692 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 1.8e-12 77.8 90 44.4
EL10Ac1g02376 Beta vulgaris HOM05D006958 ORTHO05D008814 1.2e-08 65.1 66 57.6
Nn5g30604 Nelumbo nucifera HOM05D006958 ORTHO05D008814 2.3e-07 60.8 74 48.6
Psat0s3396g0160 Pisum sativum HOM05D006958 ORTHO05D008814 6.7e-07 59.3 40 65.0
Ah.09g227430 Amaranthus hybridus HOM05D006958 ORTHO05D008814 8.8e-07 58.9 70 44.3
HPP92_009560 Vanilla planifolia HOM05D001084 ORTHO05D001275 2.0e-06 57.8 55 54.5


User provided reference genes

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