Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G174200 Carya illinoinensis HOM05D006323 ORTHO05D007827 5.6e-283 976.9 467 100.0
Haze_22429 Corylus avellana HOM05D006323 ORTHO05D007827 2.1e-221 772.3 469 80.8
Cfa013771 Carpinus fangiana HOM05D006323 ORTHO05D007827 7.0e-209 730.7 469 77.6
QL12p038177 Quercus lobata HOM05D006323 ORTHO05D007827 3.0e-204 715.3 472 74.8
Dinv44950 Davidia involucrata HOM05D006323 ORTHO05D007827 5.6e-198 694.5 463 73.9
ClCG08G016540 Citrullus lanatus HOM05D006323 ORTHO05D007827 2.5e-190 669.1 463 71.3
Hma1.2p1_0819F.1_g223630 Hydrangea macrophylla HOM05D006323 ORTHO05D007827 2.8e-189 665.6 462 71.6
Actinidia38108 Actinidia chinensis HOM05D006323 ORTHO05D007827 1.4e-188 663.3 470 71.1
MELO3C010800.2 Cucumis melo HOM05D006323 ORTHO05D007827 2.3e-188 662.5 469 68.9
CsaV3_2G026070 Cucumis sativus L. HOM05D006323 ORTHO05D007827 1.5e-187 659.8 469 69.1
Sed0007452 Sechium edule HOM05D006323 ORTHO05D007827 4.1e-185 651.7 468 69.7
TAR381G0342 Trochodendron aralioides HOM05D006323 ORTHO05D007827 5.1e-183 644.8 458 69.4
CSS0045238 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 6.6e-183 644.4 460 70.4
TAR381G1608 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.1e-182 643.7 458 69.2
CSS0024022 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.2e-181 640.2 460 70.0
Nn5g30609 Nelumbo nucifera HOM05D006323 ORTHO05D007827 4.0e-180 635.2 465 67.1
CSS0010458 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.2e-176 623.6 480 67.1
CSS0050369 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 2.3e-175 619.4 478 67.4
CANSAT25G0442 Cannabis sativa HOM05D006323 ORTHO05D007827 4.3e-174 615.1 466 65.9
Prupe.1G422100 Prunus persica HOM05D006323 ORTHO05D007827 3.6e-173 612.1 471 64.8
vmacro22049 Vaccinium macrocarpon HOM05D006323 ORTHO05D007827 6.2e-173 611.3 475 64.8
arahy.Tifrunner.gnm1.ann1.JK4I75 Arachis hypogaea HOM05D006323 ORTHO05D007827 3.9e-167 592.0 472 62.9
Eucgr.F00088 Eucalyptus grandis HOM05D006323 ORTHO05D007827 2.0e-163 579.7 454 63.2
Cpa.g.sc142.31 Carica papaya HOM05D006323 ORTHO05D007827 5.8e-163 578.2 467 60.4
Lalb_Chr14g0368151 Lupinus albus HOM05D006323 ORTHO05D007827 2.2e-162 576.2 469 63.1
Ca_13213_v3 Cicer arietinum L. HOM05D006323 ORTHO05D007827 3.8e-162 575.5 480 62.3
Cpa.g.sc142.34 Carica papaya HOM05D006323 ORTHO05D007827 7.1e-161 571.2 467 59.7
RcHm_v2.0_Chr6g0309741 Rosa chinensis HOM05D006323 ORTHO05D007827 7.1e-161 571.2 468 60.9
PSO675G0675 Papaver somniferum HOM05D006323 ORTHO05D007827 2.1e-160 569.7 477 60.2
Nitab4.5_0000497g0170 Nicotiana tabacum HOM05D006323 ORTHO05D007827 1.3e-159 567.0 466 59.7
FAN24G0652 Fragaria x ananassa HOM05D006323 ORTHO05D007827 1.7e-159 566.6 470 60.0
TWI56G0563 Tripterygium wilfordii HOM05D006323 ORTHO05D007827 2.3e-159 566.2 458 60.9
Aqoxy6G02596 Aquilegia oxysepala HOM05D006323 ORTHO05D007827 3.0e-159 565.8 467 61.5
FvH4_2g32960 Fragaria vesca HOM05D006323 ORTHO05D007827 3.0e-159 565.8 457 61.1
PSO541G5960 Papaver somniferum HOM05D006323 ORTHO05D007827 3.0e-159 565.8 467 60.6
Rhsim07G0219300 Rhododendron simsii HOM05D006323 ORTHO05D007827 1.5e-158 563.5 462 62.6
Lj5g0017088 Lotus japonicus HOM05D006323 ORTHO05D007827 2.5e-158 562.8 472 62.1
FAN20G1244 Fragaria x ananassa HOM05D006323 ORTHO05D007827 5.6e-158 561.6 457 60.8
Nitab4.5_0003725g0070 Nicotiana tabacum HOM05D006323 ORTHO05D007827 7.3e-158 561.2 465 60.6
PGR083G0013 Punica granatum HOM05D006323 ORTHO05D007827 7.3e-158 561.2 467 61.7
PGSC0003DMG400010620 Solanum tuberosum HOM05D006323 ORTHO05D007827 1.6e-157 560.1 470 58.7
Oeu016579.1 Olea europaea HOM05D006323 ORTHO05D007827 2.1e-157 559.7 467 59.1
Sopen04g031380 Solanum pennellii HOM05D006323 ORTHO05D007827 8.1e-157 557.8 470 58.7
FAN15G2783 Fragaria x ananassa HOM05D006323 ORTHO05D007827 2.4e-156 556.2 459 61.4
Psat6g018000 Pisum sativum HOM05D006323 ORTHO05D007827 9.0e-156 554.3 489 59.5
TPR.G13155 Trifolium pratense HOM05D006323 ORTHO05D007827 1.2e-155 553.9 478 60.0
Thecc.08G088000 Theobroma cacao HOM05D006323 ORTHO05D007827 1.5e-155 553.5 468 60.0
FAN27G3326 Fragaria x ananassa HOM05D006323 ORTHO05D007827 2.0e-155 553.1 457 60.0
Medtr1g017940 Medicago truncatula HOM05D006323 ORTHO05D007827 9.9e-155 550.8 479 59.5
Manes.18G047100 Manihot esculenta HOM05D006323 ORTHO05D007827 7.1e-153 544.7 456 58.8
Potri.002G117900 Populus trichocarpa HOM05D006323 ORTHO05D007827 1.6e-152 543.5 461 58.6
Duzib093G0619 Durio zibethinus HOM05D006323 ORTHO05D007827 6.0e-152 541.6 462 59.5
Gohir.A05G210400 Gossypium hirsutum HOM05D006323 ORTHO05D007827 5.1e-151 538.5 469 59.9
GSVIVG01009337001 Vitis vinifera HOM05D006323 ORTHO05D007827 8.7e-151 537.7 470 60.4
CAN.G724.32 Capsicum annuum HOM05D006323 ORTHO05D007827 1.1e-150 537.3 458 57.0
Migut.N02786 Erythranthe guttata HOM05D006323 ORTHO05D007827 2.5e-150 536.2 451 57.4
SalBow2G0555 Salvia bowleyana HOM05D006323 ORTHO05D007827 2.5e-150 536.2 464 57.3
Gorai.009G220400 Gossypium raimondii HOM05D006323 ORTHO05D007827 1.6e-149 533.5 469 59.1
Hund05295 Selenicereus undatus HOM05D006323 ORTHO05D007827 2.1e-149 533.1 455 58.7
Gohir.D05G213700 Gossypium hirsutum HOM05D006323 ORTHO05D007827 3.1e-148 529.3 469 58.8
Sabra02G0092600 Salix brachista HOM05D006323 ORTHO05D007827 5.3e-148 528.5 461 57.7
EL10Ac1g02373 Beta vulgaris HOM05D006323 ORTHO05D007827 9.0e-148 527.7 468 59.4
Glyma.17G234600 Glycine max HOM05D006323 ORTHO05D007827 2.0e-147 526.6 467 57.0
HanXRQChr10g0298611 Helianthus annuus HOM05D006323 ORTHO05D007827 1.3e-146 523.9 473 56.9
Ciclev10001174m.g Citrus clementina HOM05D006323 ORTHO05D007827 7.1e-145 518.1 456 58.6
arahy.Tifrunner.gnm1.ann1.694GR7 Arachis hypogaea HOM05D006323 ORTHO05D007827 3.5e-144 515.8 425 61.4
Phvul.001G028300 Phaseolus vulgaris HOM05D006323 ORTHO05D007827 2.3e-143 513.1 476 55.9
Atru.chr13.839 Acer truncatum HOM05D006323 ORTHO05D007827 2.8e-141 506.1 455 58.9
SGA_v2.0_scaffold28G11834 Striga asiatica HOM05D006323 ORTHO05D007827 3.7e-141 505.8 460 56.5
Glyma.14G089027 Glycine max HOM05D006323 ORTHO05D007827 1.1e-137 494.2 463 56.2
Lsat_1_v5_gn_1_1301 Lactuca sativa HOM05D006323 ORTHO05D007827 4.6e-136 488.8 474 54.2
QL05p065459 Quercus lobata HOM05D006323 ORTHO05D007827 2.6e-131 473.0 315 74.3
VMungo0647G1220 Vigna mungo HOM05D006323 ORTHO05D007827 5.9e-131 471.9 463 53.8
TAR625G0711 Trochodendron aralioides HOM05D006323 ORTHO05D007827 3.8e-130 469.2 442 56.1
AUR62022472 Chenopodium quinoa HOM05D006323 ORTHO05D007827 1.0e-127 461.1 473 53.5
THA.LOC104825780 Tarenaya hassleriana HOM05D006323 ORTHO05D007827 1.4e-127 460.7 449 52.3
CDE04G3275 Ceratophyllum demersum HOM05D006323 ORTHO05D007827 8.8e-127 458.0 457 51.2
HPP92_013407 Vanilla planifolia HOM05D006323 ORTHO05D007827 2.9e-122 443.0 461 50.1
Ah.05g167080 Amaranthus hybridus HOM05D006323 ORTHO05D007827 1.6e-120 437.2 460 51.7
Sc26g0004210 Simmondsia chinensis HOM05D006323 ORTHO05D007827 2.1e-120 436.8 407 54.8
Carub.0003s1171 Capsella rubella HOM05D006323 ORTHO05D007827 6.1e-120 435.3 456 49.8
Thhalv10028685m.g Eutrema salsugineum HOM05D006323 ORTHO05D007827 1.4e-119 434.1 452 52.0
Sp6g10510 Schrenkiella parvula HOM05D006323 ORTHO05D007827 3.0e-119 433.0 452 50.7
ATR0739G201 Amborella trichopoda HOM05D006323 ORTHO05D007827 1.8e-116 423.7 492 48.4
AT3G12350 Arabidopsis thaliana HOM05D006323 ORTHO05D007827 9.1e-116 421.4 455 49.7
AL3G24000 Arabidopsis lyrata HOM05D006323 ORTHO05D007827 1.2e-115 421.0 453 49.9
Lj4A71T64 Lonicera japonica HOM05D006323 ORTHO05D007827 1.3e-114 417.5 323 65.9
C03p33680 Brassica napus HOM05D006323 ORTHO05D007827 1.5e-110 404.1 454 48.5
BolC3t15688H Brassica oleracea HOM05D006323 ORTHO05D007827 1.5e-110 404.1 454 48.5
Aa31LG5G21510 Aethionema arabicum HOM05D006323 ORTHO05D007827 2.6e-110 403.3 448 48.2
CARHR287100 Cardamine hirsuta HOM05D006323 ORTHO05D007827 9.7e-110 401.4 451 47.9
CAN.G724.31 Capsicum annuum HOM05D006323 ORTHO05D007827 1.8e-108 397.1 455 45.3
BcaC01g04786 Brassica carinata HOM05D006323 ORTHO05D007827 1.7e-106 390.6 453 47.5
BcaB01g02882 Brassica carinata HOM05D006323 ORTHO05D007827 2.7e-104 383.3 454 46.3
AUR62037416 Chenopodium quinoa HOM05D006323 ORTHO05D007827 1.0e-103 381.3 454 47.1
A03p27900 Brassica napus HOM05D006323 ORTHO05D007827 1.8e-103 380.6 452 46.2
BraA03t12002Z Brassica rapa HOM05D006323 ORTHO05D007827 9.8e-102 374.8 452 45.6
HPP92_013383 Vanilla planifolia HOM05D006323 ORTHO05D007827 4.0e-95 352.8 371 49.9
BcaC01g04794 Brassica carinata HOM05D006323 ORTHO05D007827 4.4e-94 349.4 453 44.6
TAR628G0857 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.1e-81 308.1 287 55.7
Cc10_g05020 Coffea canephora HOM05D006323 ORTHO05D007827 5.6e-81 305.8 280 57.5
ECA247G3150 Erigeron canadensis HOM05D006323 ORTHO05D007827 3.6e-80 303.1 323 53.9
COL.COLO4_28496 Corchorus olitorius HOM05D006323 ORTHO05D007827 3.4e-78 296.6 255 57.6
Mapoly0007s0129 Marchantia polymorpha HOM05D006323 ORTHO05D007827 1.7e-69 267.7 496 33.9
SEGI_30290 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 1.5e-62 244.6 328 42.7
unitig_8.g4874 Utricularia gibba HOM05D006323 ORTHO05D007827 4.6e-59 233.0 237 54.9
Os12g0511000 Oryza sativa ssp. japonica HOM05D006323 ORTHO05D007827 1.3e-58 231.5 386 37.8
Pp3c15_12240 Physcomitrium patens HOM05D006323 ORTHO05D007827 1.9e-52 211.1 524 30.2
AagrBONN_evm.TU.Sc2ySwM_362.2944 Anthoceros agrestis HOM05D006323 ORTHO05D007827 1.3e-45 188.3 360 35.8
Eucgr.L02719 Eucalyptus grandis HOM05D006323 ORTHO05D007827 7.1e-44 182.6 150 60.7
HPP92_013381 Vanilla planifolia HOM05D006323 ORTHO05D007827 3.4e-38 163.7 204 45.1
FvH4_3g44630 Fragaria vesca HOM05D006323 ORTHO05D007827 2.3e-34 151.0 101 67.3
TAR623G1714 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.5e-33 148.3 99 66.7
MD08G1081200 Malus domestica HOM05D006323 ORTHO05D007827 4.9e-29 133.3 122 54.9
CBR_g25752 Chara braunii HOM05D006323 ORTHO05D007827 1.1e-28 132.1 552 23.4
COL.COLO4_28497 Corchorus olitorius HOM05D006323 ORTHO05D007827 2.5e-28 131.0 136 49.3
QL04p027551 Quercus lobata HOM05D006323 ORTHO05D007827 1.5e-25 121.7 85 65.9
Eucgr.C01112 Eucalyptus grandis HOM05D006323 ORTHO05D007827 4.8e-24 116.7 91 61.5
Lj5P501T7 Lonicera japonica HOM05D006323 ORTHO05D007827 1.5e-22 111.7 92 70.7
unitig_8.g4875 Utricularia gibba HOM05D006323 ORTHO05D007827 2.2e-21 107.8 106 50.0
Lj1P1160T24 Lonicera japonica HOM05D006323 ORTHO05D007827 5.0e-21 106.7 78 69.2
Zm00001eb264620 Zea mays HOM05D006323 ORTHO05D007827 8.4e-21 105.9 320 29.1
SEGI_04434 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 5.5e-20 103.2 166 37.3
TAR623G1335 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.8e-18 98.2 65 64.6
HPP92_006886 Vanilla planifolia HOM05D003519 ORTHO05D004443 4.1e-07 60.5 133 26.3
Oeu037483.1 Olea europaea HOM05D006323 ORTHO05D007827 2.0e-06 58.2 142 34.5


User provided reference genes

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