Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G172600 Carya illinoinensis HOM05D005471 ORTHO05D006170 2.4e-237 825.1 410 100.0
Cfa013748 Carpinus fangiana HOM05D005471 ORTHO05D006170 1.2e-199 699.9 412 86.4
CiPaw.08G051800 Carya illinoinensis HOM05D005471 ORTHO05D006170 4.0e-192 674.9 410 83.4
GSVIVG01009307001 Vitis vinifera HOM05D005471 ORTHO05D006170 6.2e-177 624.4 413 78.2
MD08G1078900 Malus domestica HOM05D005471 ORTHO05D006170 1.2e-172 610.1 412 76.0
MD15G1065900 Malus domestica HOM05D005471 ORTHO05D006170 1.6e-172 609.8 412 76.2
FvH4_2g32730 Fragaria vesca HOM05D005471 ORTHO05D006170 6.0e-172 607.8 412 76.2
FAN20G2694 Fragaria x ananassa HOM05D005471 ORTHO05D006170 5.1e-171 604.7 415 76.1
Manes.18G048900 Manihot esculenta HOM05D005471 ORTHO05D006170 1.9e-170 602.8 412 75.2
FAN15G0642 Fragaria x ananassa HOM05D005471 ORTHO05D006170 5.6e-170 601.3 415 75.4
Thecc.08G085200 Theobroma cacao HOM05D005471 ORTHO05D006170 9.6e-170 600.5 412 76.0
MELO3C010789.2 Cucumis melo HOM05D005471 ORTHO05D006170 2.8e-169 599.0 412 73.3
Dinv44934 Davidia involucrata HOM05D005471 ORTHO05D006170 8.1e-169 597.4 411 74.7
Glyma.06G048400 Glycine max HOM05D005471 ORTHO05D006170 1.1e-168 597.0 412 74.3
Gohir.D06G022300 Gossypium hirsutum HOM05D005471 ORTHO05D006170 1.1e-168 597.0 412 75.5
Gorai.010G026900 Gossypium raimondii HOM05D005471 ORTHO05D006170 1.1e-168 597.0 412 75.5
CsaV3_2G025960 Cucumis sativus L. HOM05D005471 ORTHO05D006170 2.0e-167 592.8 412 73.1
Prupe.1G419800 Prunus persica HOM05D005471 ORTHO05D006170 2.0e-167 592.8 404 76.0
Nn5g30656 Nelumbo nucifera HOM05D005471 ORTHO05D006170 2.6e-167 592.4 413 74.8
Atru.chr13.864 Acer truncatum HOM05D005471 ORTHO05D006170 4.5e-167 591.7 408 74.5
Phvul.009G073700 Phaseolus vulgaris HOM05D005471 ORTHO05D006170 4.5e-167 591.7 412 74.0
Gohir.A06G025200 Gossypium hirsutum HOM05D005471 ORTHO05D006170 9.9e-167 590.5 412 74.8
Medtr3g103350 Medicago truncatula HOM05D005471 ORTHO05D006170 1.3e-166 590.1 410 72.9
FAN27G0342 Fragaria x ananassa HOM05D005471 ORTHO05D006170 1.7e-166 589.7 429 73.0
Ciclev10001411m.g Citrus clementina HOM05D005471 ORTHO05D006170 2.2e-166 589.3 412 74.5
Lj1g0028245 Lotus japonicus HOM05D005471 ORTHO05D006170 8.4e-166 587.4 412 74.0
Manes.05G183100 Manihot esculenta HOM05D005471 ORTHO05D006170 8.4e-166 587.4 410 73.9
TPR.G30210 Trifolium pratense HOM05D005471 ORTHO05D006170 1.9e-165 586.3 414 73.2
FAN24G0217 Fragaria x ananassa HOM05D005471 ORTHO05D006170 2.4e-165 585.9 407 75.4
Sed0019663 Sechium edule HOM05D005471 ORTHO05D006170 2.4e-165 585.9 404 74.3
RcHm_v2.0_Chr6g0309951 Rosa chinensis HOM05D005471 ORTHO05D006170 1.6e-164 583.2 412 73.3
Hma1.2p1_1170F.1_g263420 Hydrangea macrophylla HOM05D005471 ORTHO05D006170 1.0e-163 580.5 415 73.0
Sc02g0008090 Simmondsia chinensis HOM05D005471 ORTHO05D006170 3.9e-163 578.6 410 70.7
Lalb_Chr08g0245201 Lupinus albus HOM05D005471 ORTHO05D006170 1.5e-162 576.6 412 73.1
CSS0040686 Camellia sinensis var. sinensis HOM05D005471 ORTHO05D006170 2.5e-162 575.9 413 72.6
COL.COLO4_28470 Corchorus olitorius HOM05D005471 ORTHO05D006170 5.6e-162 574.7 406 74.1
Lalb_Chr11g0063001 Lupinus albus HOM05D005471 ORTHO05D006170 7.4e-162 574.3 412 71.8
Eucgr.F02230 Eucalyptus grandis HOM05D005471 ORTHO05D006170 1.4e-160 570.1 412 71.1
arahy.Tifrunner.gnm1.ann1.F72CPE Arachis hypogaea HOM05D005471 ORTHO05D006170 1.8e-160 569.7 410 71.7
TWI12G0997 Tripterygium wilfordii HOM05D005471 ORTHO05D006170 3.4e-159 565.5 411 71.3
Gorai.009G221700 Gossypium raimondii HOM05D005471 ORTHO05D006170 1.0e-158 563.9 412 72.1
ClCG08G016670 Citrullus lanatus HOM05D005471 ORTHO05D006170 2.2e-158 562.8 408 71.6
Dinv39207 Davidia involucrata HOM05D005471 ORTHO05D006170 4.9e-158 561.6 413 72.4
Gohir.D05G215000 Gossypium hirsutum HOM05D005471 ORTHO05D006170 1.4e-157 560.1 412 71.6
CSS0038926 Camellia sinensis var. sinensis HOM05D005471 ORTHO05D006170 9.3e-157 557.4 441 66.7
arahy.Tifrunner.gnm1.ann1.P8GEK4 Arachis hypogaea HOM05D005471 ORTHO05D006170 6.0e-156 554.7 439 67.7
ECA232G3342 Erigeron canadensis HOM05D005471 ORTHO05D006170 6.0e-156 554.7 411 70.6
Psat5g045040 Pisum sativum HOM05D005471 ORTHO05D006170 1.0e-155 553.9 412 69.9
Sabra14G0008300 Salix brachista HOM05D005471 ORTHO05D006170 1.0e-155 553.9 438 67.6
Aqoxy6G02473 Aquilegia oxysepala HOM05D005471 ORTHO05D006170 1.5e-154 550.1 415 68.4
HanXRQChr09g0254061 Helianthus annuus HOM05D005471 ORTHO05D006170 1.5e-154 550.1 412 68.9
HanXRQChr15g0493081 Helianthus annuus HOM05D005471 ORTHO05D006170 1.6e-153 546.6 411 69.1
Carub.0002s0591 Capsella rubella HOM05D005471 ORTHO05D006170 2.8e-153 545.8 410 68.0
CSS0014765 Camellia sinensis var. sinensis HOM05D005471 ORTHO05D006170 4.8e-153 545.0 413 70.5
CARHR283850 Cardamine hirsuta HOM05D005471 ORTHO05D006170 6.2e-153 544.7 410 68.3
AT1G59520 Arabidopsis thaliana HOM05D005471 ORTHO05D006170 1.1e-152 543.9 410 68.5
Sp2g05030 Schrenkiella parvula HOM05D005471 ORTHO05D006170 1.4e-152 543.5 410 68.5
Solyc04g077560.3 Solanum lycopersicum HOM05D005471 ORTHO05D006170 1.8e-152 543.1 411 68.4
Sopen04g031200 Solanum pennellii HOM05D005471 ORTHO05D006170 4.0e-152 542.0 411 68.1
Migut.C00408 Erythranthe guttata HOM05D005471 ORTHO05D006170 5.3e-152 541.6 412 67.7
PGSC0003DMG400004915 Solanum tuberosum HOM05D005471 ORTHO05D006170 6.9e-152 541.2 411 68.4
SGA_v2.0_scaffold74G24542 Striga asiatica HOM05D005471 ORTHO05D006170 2.6e-151 539.3 412 67.5
Duzib093G1789 Durio zibethinus HOM05D005471 ORTHO05D006170 7.6e-151 537.7 410 69.5
BcaC09g49476 Brassica carinata HOM05D005471 ORTHO05D006170 1.0e-150 537.3 410 67.6
MBI16_g27035_MAGBIO Magnolia biondii HOM05D005471 ORTHO05D006170 5.5e-149 531.6 458 63.1
THA.LOC104819922 Tarenaya hassleriana HOM05D005471 ORTHO05D006170 5.5e-149 531.6 411 65.2
Gohir.D06G026900 Gossypium hirsutum HOM05D005471 ORTHO05D006170 1.6e-148 530.0 366 75.1
VMungo1309G2773 Vigna mungo HOM05D005471 ORTHO05D006170 2.7e-148 529.3 410 67.3
A01p28660 Brassica napus HOM05D005471 ORTHO05D006170 3.5e-148 528.9 407 67.6
Cc10_g07570 Coffea canephora HOM05D005471 ORTHO05D006170 6.1e-148 528.1 413 68.5
Ah.05g166980 Amaranthus hybridus HOM05D005471 ORTHO05D006170 1.3e-147 526.9 417 65.7
CDE02G4131 Ceratophyllum demersum HOM05D005471 ORTHO05D006170 2.3e-147 526.2 410 66.3
EL10Ac1g02354 Beta vulgaris HOM05D005471 ORTHO05D006170 6.7e-147 524.6 410 64.9
BraA01t03038Z Brassica rapa HOM05D005471 ORTHO05D006170 8.7e-147 524.2 414 66.7
C01p36310 Brassica napus HOM05D005471 ORTHO05D006170 1.5e-146 523.5 403 67.5
Rhsim06G0064300 Rhododendron simsii HOM05D005471 ORTHO05D006170 2.5e-146 522.7 404 68.8
BolC1t03588H Brassica oleracea HOM05D005471 ORTHO05D006170 7.4e-146 521.2 414 66.4
MSTRG.25028 Avicennia marina HOM05D005471 ORTHO05D006170 1.3e-145 520.4 412 66.3
Ca_15890_v3 Cicer arietinum L. HOM05D005471 ORTHO05D006170 1.3e-145 520.4 414 68.4
Glyma.04G047500 Glycine max HOM05D005471 ORTHO05D006170 1.4e-141 506.9 418 66.0
Gohir.A05G211700 Gossypium hirsutum HOM05D005471 ORTHO05D006170 1.4e-141 506.9 412 66.5
ATR0739G016 Amborella trichopoda HOM05D005471 ORTHO05D006170 3.2e-141 505.8 401 65.1
PSO017G6379 Papaver somniferum HOM05D005471 ORTHO05D006170 3.2e-141 505.8 407 66.1
unitig_37.g13113 Utricularia gibba HOM05D005471 ORTHO05D006170 2.1e-140 503.1 417 63.1
BcaC09g49477 Brassica carinata HOM05D005471 ORTHO05D006170 2.0e-138 496.5 401 66.3
PSO170G6612 Papaver somniferum HOM05D005471 ORTHO05D006170 2.0e-138 496.5 407 65.4
PSO675G5405 Papaver somniferum HOM05D005471 ORTHO05D006170 2.0e-138 496.5 414 63.3
Thhalv10023553m.g Eutrema salsugineum HOM05D005471 ORTHO05D006170 5.7e-138 495.0 410 63.2
PSO541G0412 Papaver somniferum HOM05D005471 ORTHO05D006170 4.8e-137 491.9 414 63.5
PGR031G3068 Punica granatum HOM05D005471 ORTHO05D006170 4.2e-133 478.8 413 63.4
Aa31LG2G10610 Aethionema arabicum HOM05D005471 ORTHO05D006170 6.1e-132 474.9 428 61.0
Nitab4.5_0001426g0050 Nicotiana tabacum HOM05D005471 ORTHO05D006170 7.4e-130 468.0 446 58.3
HPP92_007709 Vanilla planifolia HOM05D005471 ORTHO05D006170 1.6e-124 450.3 407 58.7
TAR625G0189 Trochodendron aralioides HOM05D005471 ORTHO05D006170 3.9e-123 445.7 318 72.6
Os07g0248800 Oryza sativa ssp. japonica HOM05D005471 ORTHO05D006170 8.8e-123 444.5 405 57.0
Os10g0102900 Oryza sativa ssp. japonica HOM05D005471 ORTHO05D006170 2.6e-122 443.0 405 57.0
Os04g0183100 Oryza sativa ssp. japonica HOM05D005471 ORTHO05D006170 4.1e-120 435.6 408 55.9
BcaB04g20211 Brassica carinata HOM05D005471 ORTHO05D006170 5.3e-120 435.3 410 58.3
DCAR_019346 Daucus carota HOM05D005471 ORTHO05D006170 1.2e-119 434.1 410 59.0
Lj4A753G30 Lonicera japonica HOM05D005471 ORTHO05D006170 7.7e-119 431.4 392 61.2
Nitab4.5_0002796g0080 Nicotiana tabacum HOM05D005471 ORTHO05D006170 1.3e-118 430.6 430 56.5
QL12p038448 Quercus lobata HOM05D005471 ORTHO05D006170 3.6e-116 422.5 307 71.0
Zm00001eb025640 Zea mays HOM05D005471 ORTHO05D006170 2.3e-115 419.9 409 55.0
Lsat_1_v5_gn_1_56140 Lactuca sativa HOM05D001400 ORTHO05D001795 3.0e-115 419.5 400 58.0
AUR62035006 Chenopodium quinoa HOM05D005471 ORTHO05D006170 1.6e-111 407.1 414 55.3
Lsat_1_v5_gn_2_90520 Lactuca sativa HOM05D005471 ORTHO05D006170 1.3e-110 404.1 409 58.2
Potri.014G013500 Populus trichocarpa HOM05D005471 ORTHO05D006170 6.5e-110 401.7 284 72.5
Peaxi162Scf00340g00069 Petunia axillaris HOM05D005471 ORTHO05D006170 9.8e-106 387.9 459 51.0
Mapoly0067s0099 Marchantia polymorpha HOM05D005471 ORTHO05D006170 2.6e-98 363.2 407 50.1
Cpa.g.sc142.57 Carica papaya HOM05D005471 ORTHO05D006170 1.8e-96 357.1 321 62.0
Pp3c17_20680 Physcomitrium patens HOM05D005471 ORTHO05D006170 4.7e-92 342.4 401 47.6
Nitab4.5_0006888g0020 Nicotiana tabacum HOM05D005471 ORTHO05D006170 6.2e-92 342.0 440 48.2
AagrBONN_evm.TU.Sc2ySwM_368.1412 Anthoceros agrestis HOM05D005471 ORTHO05D006170 4.6e-87 325.9 407 46.2
SMO117G0302 Selaginella moellendorffii HOM05D005471 ORTHO05D006170 2.3e-83 313.5 395 45.6
Haze_22399 Corylus avellana HOM05D005471 ORTHO05D006170 1.6e-79 300.8 432 45.8
vmacro21421 Vaccinium macrocarpon HOM05D005471 ORTHO05D006170 2.5e-77 293.5 306 53.3
Haze_22407 Corylus avellana HOM05D005471 ORTHO05D006170 2.8e-76 290.0 446 44.2
CBR_g49495 Chara braunii HOM05D005471 ORTHO05D006170 1.1e-75 288.1 436 41.3
DCAR_020058 Daucus carota HOM05D005471 ORTHO05D006170 7.8e-71 271.9 248 60.1
AUR62037460 Chenopodium quinoa HOM05D005471 ORTHO05D006170 1.4e-56 224.6 251 49.4
Psat5g037200 Pisum sativum HOM05D005471 ORTHO05D006170 4.2e-56 223.0 159 67.3
vmacro21420 Vaccinium macrocarpon HOM05D005471 ORTHO05D006170 5.1e-54 216.1 165 70.9
Gohir.D04G027975 Gossypium hirsutum HOM05D005471 ORTHO05D006170 9.6e-37 158.7 121 71.9
Gorai.012G030800 Gossypium raimondii HOM05D005471 ORTHO05D006170 2.8e-36 157.1 121 71.1
Gohir.D12G192766 Gossypium hirsutum HOM05D005471 ORTHO05D006170 4.8e-36 156.4 121 71.9
QL12p038454 Quercus lobata HOM05D005471 ORTHO05D006170 6.9e-35 152.5 117 71.8
Gohir.A12G016250 Gossypium hirsutum HOM05D005471 ORTHO05D006170 3.4e-34 150.2 121 69.4
Cpa.g.sc142.58 Carica papaya HOM05D005471 ORTHO05D006170 6.3e-28 129.4 89 73.0
DCAR_020059 Daucus carota HOM05D005471 ORTHO05D006170 5.3e-27 126.3 98 71.4
SHI08425 Sapria himalayana HOM05D005471 ORTHO05D006170 6.9e-27 125.9 129 51.9
Hund05280 Selenicereus undatus HOM05D005471 ORTHO05D006170 1.4e-24 118.2 103 58.3
Peaxi162Scf00448g00027 Petunia axillaris HOM05D005471 ORTHO05D006170 6.1e-23 112.8 118 59.3
Gorai.001G227100 Gossypium raimondii HOM05D005471 ORTHO05D006170 2.5e-21 107.5 68 79.4
Phvul.009G072300 Phaseolus vulgaris HOM05D005471 ORTHO05D000997 4.8e-20 103.2 83 66.3
SEGI_08278 Sequoiadendron giganteum HOM05D005471 ORTHO05D006170 1.4e-14 85.1 97 47.4
Cre07.g320250 Chlamydomonas reinhardtii HOM05D005471 ORTHO05D006170 3.9e-14 83.6 351 26.5
Gohir.D11G128350 Gossypium hirsutum HOM05D005471 ORTHO05D006170 1.7e-12 78.2 52 73.1
SEGI_29276 Sequoiadendron giganteum HOM05D005471 ORTHO05D006170 2.8e-12 77.4 83 54.2
CAN.G213.23 Capsicum annuum HOM05D005471 ORTHO05D006170 2.0e-10 71.2 74 48.6
Actinidia31832 Actinidia chinensis HOM05D006494 ORTHO05D007787 1.3e-09 68.6 64 57.8
Phvul.009G072333 Phaseolus vulgaris HOM05D005471 ORTHO05D006170 1.5e-08 65.1 44 65.9


User provided reference genes

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