Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G161600 Carya illinoinensis HOM05D005719 ORTHO05D007030 2.0e-297 1025.0 514 100.0
CiPaw.08G058000 Carya illinoinensis HOM05D005719 ORTHO05D007030 7.0e-218 760.8 476 80.0
QL12p040011 Quercus lobata HOM05D005719 ORTHO05D007030 7.7e-209 730.7 481 78.0
Haze_22505 Corylus avellana HOM05D005719 ORTHO05D007030 4.2e-207 724.9 504 73.8
Cfa013832 Carpinus fangiana HOM05D000446 ORTHO05D000321 2.9e-200 702.2 449 77.3
GSVIVG01009231001 Vitis vinifera HOM05D005719 ORTHO05D007030 3.4e-188 662.1 442 74.7
Manes.18G055200 Manihot esculenta HOM05D005719 ORTHO05D007030 1.7e-184 649.8 464 70.3
Sabra02G0085500 Salix brachista HOM05D005719 ORTHO05D007030 1.4e-181 640.2 470 68.9
Gohir.A05G217800 Gossypium hirsutum HOM05D005719 ORTHO05D007030 3.4e-180 635.6 474 69.4
Gorai.009G226700 Gossypium raimondii HOM05D005719 ORTHO05D007030 2.4e-178 629.4 467 68.7
CSS0009932 Camellia sinensis var. sinensis HOM05D005719 ORTHO05D007030 7.0e-178 627.9 447 70.2
TAR628G1450 Trochodendron aralioides HOM05D005719 ORTHO05D007030 4.6e-177 625.2 471 68.4
Duzib093G1837 Durio zibethinus HOM05D005719 ORTHO05D007030 1.3e-176 623.6 467 68.1
TWI56G1147 Tripterygium wilfordii HOM05D005719 ORTHO05D007030 2.3e-176 622.9 441 71.7
vmacro04622 Vaccinium macrocarpon HOM05D005719 ORTHO05D007030 3.0e-176 622.5 466 66.7
Gohir.D05G219700 Gossypium hirsutum HOM05D005719 ORTHO05D007030 3.9e-176 622.1 467 68.5
Thecc.08G076500 Theobroma cacao HOM05D005719 ORTHO05D007030 5.6e-175 618.2 468 68.2
MD15G1392600 Malus domestica HOM05D005719 ORTHO05D007030 7.3e-175 617.8 476 66.4
Prupe.1G540100 Prunus persica HOM05D005719 ORTHO05D007030 9.5e-175 617.5 501 64.5
Actinidia19605 Actinidia chinensis HOM05D005719 ORTHO05D007030 2.1e-174 616.3 469 66.7
MD08G1208600 Malus domestica HOM05D005719 ORTHO05D007030 2.8e-174 615.9 452 68.6
RcHm_v2.0_Chr7g0233191 Rosa chinensis HOM05D005719 ORTHO05D007030 2.3e-173 612.8 453 69.8
CANSAT21G2028 Cannabis sativa HOM05D005719 ORTHO05D007030 1.3e-168 597.0 444 67.1
ClCG11G014800 Citrullus lanatus HOM05D005719 ORTHO05D007030 3.3e-167 592.4 466 64.6
Sed0009724 Sechium edule HOM05D005719 ORTHO05D007030 4.3e-167 592.0 466 63.9
TAR381G0820 Trochodendron aralioides HOM05D005719 ORTHO05D007030 1.2e-166 590.5 442 68.1
FvH4_5g33860 Fragaria vesca HOM05D005719 ORTHO05D007030 3.6e-166 589.0 481 64.7
Glyma.06G092200 Glycine max HOM05D005719 ORTHO05D007030 1.1e-165 587.4 466 64.6
Hma1.2p1_0010F.1_g006360 Hydrangea macrophylla HOM05D005719 ORTHO05D007030 4.0e-165 585.5 443 67.9
Psat5g018640 Pisum sativum HOM05D005719 ORTHO05D007030 1.2e-164 583.9 465 63.0
arahy.Tifrunner.gnm1.ann1.SLT0HR Arachis hypogaea HOM05D005719 ORTHO05D007030 2.0e-164 583.2 441 67.1
Phvul.009G145500 Phaseolus vulgaris HOM05D005719 ORTHO05D007030 2.6e-164 582.8 466 64.4
Medtr3g111330 Medicago truncatula HOM05D005719 ORTHO05D007030 5.8e-164 581.6 451 64.1
arahy.Tifrunner.gnm1.ann1.I1WLRD Arachis hypogaea HOM05D005719 ORTHO05D007030 2.9e-163 579.3 463 64.4
Ciclev10000979m.g Citrus clementina HOM05D005719 ORTHO05D007030 3.7e-163 578.9 444 65.5
Glyma.04G090400 Glycine max HOM05D005719 ORTHO05D007030 2.4e-162 576.2 464 64.2
Sc02g0008400 Simmondsia chinensis HOM05D005719 ORTHO05D007030 1.2e-161 573.9 442 63.6
Eucgr.F02170 Eucalyptus grandis HOM05D005719 ORTHO05D007030 2.1e-161 573.2 470 64.3
TPR.G12418 Trifolium pratense HOM05D005719 ORTHO05D007030 6.0e-161 571.6 442 64.5
CsaV3_3G048210 Cucumis sativus L. HOM05D005719 ORTHO05D007030 7.8e-161 571.2 460 63.5
Duzib041G0544 Durio zibethinus HOM05D005719 ORTHO05D007030 2.3e-160 569.7 468 64.1
Lalb_Chr11g0064791 Lupinus albus HOM05D005719 ORTHO05D007030 3.9e-160 568.9 465 63.0
PGR031G2819 Punica granatum HOM05D005719 ORTHO05D007030 5.6e-159 565.1 443 65.5
Atru.chr13.942 Acer truncatum HOM05D005719 ORTHO05D007030 6.8e-157 558.1 468 62.2
FAN08G1402 Fragaria x ananassa HOM05D005719 ORTHO05D007030 1.5e-156 557.0 549 56.5
Cpa.g.sc177.3 Carica papaya HOM05D005719 ORTHO05D007030 4.4e-156 555.4 418 66.0
EL10Ac1g02246 Beta vulgaris HOM05D005719 ORTHO05D007030 9.9e-156 554.3 477 59.3
COL.COLO4_35322 Corchorus olitorius HOM05D005719 ORTHO05D007030 2.9e-155 552.7 465 63.4
Lj1g0010479 Lotus japonicus HOM05D005719 ORTHO05D007030 1.4e-154 550.4 462 61.0
Cc10_g08220 Coffea canephora HOM05D005719 ORTHO05D007030 3.2e-154 549.3 451 62.1
Nitab4.5_0001608g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 9.3e-154 547.7 474 60.5
TPR.G21947 Trifolium pratense HOM05D005719 ORTHO05D007030 2.3e-152 543.1 411 65.2
PSO700G0171 Papaver somniferum HOM05D005719 ORTHO05D007030 3.0e-152 542.7 441 61.7
PSO761G0268 Papaver somniferum HOM05D005719 ORTHO05D007030 6.6e-152 541.6 441 61.7
VMungo1309G0989 Vigna mungo HOM05D005719 ORTHO05D007030 5.6e-151 538.5 438 64.4
Migut.C00296 Erythranthe guttata HOM05D005719 ORTHO05D007030 7.3e-151 538.1 448 60.0
Oeu035376.1 Olea europaea HOM05D005719 ORTHO05D007030 1.3e-150 537.3 447 59.5
Thhalv10004086m.g Eutrema salsugineum HOM05D005719 ORTHO05D007030 2.8e-150 536.2 468 59.2
Sp2g17320 Schrenkiella parvula HOM05D005719 ORTHO05D007030 4.8e-150 535.4 466 58.8
THA.LOC104823811 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 1.4e-149 533.9 478 56.9
HanXRQChr03g0065451 Helianthus annuus HOM05D005719 ORTHO05D007030 4.4e-148 528.9 478 57.7
Hund05222 Selenicereus undatus HOM05D005719 ORTHO05D007030 4.4e-148 528.9 475 58.9
BcaC06g30902 Brassica carinata HOM05D005719 ORTHO05D007030 9.9e-148 527.7 468 59.2
THA.LOC104805699 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 8.4e-147 524.6 471 56.9
CARHR286650 Cardamine hirsuta HOM05D005719 ORTHO05D007030 2.4e-146 523.1 461 58.8
MBI16_g44752_MAGBIO Magnolia biondii HOM05D005719 ORTHO05D007030 3.2e-146 522.7 435 61.8
AL5G18300 Arabidopsis lyrata HOM05D005719 ORTHO05D007030 5.4e-146 521.9 467 58.5
Aa31LG2G4530 Aethionema arabicum HOM05D005719 ORTHO05D007030 7.1e-146 521.5 455 60.2
Dinv44886 Davidia involucrata HOM05D005719 ORTHO05D007030 7.1e-146 521.5 396 67.9
Lsat_1_v5_gn_7_55820 Lactuca sativa HOM05D005719 ORTHO05D007030 9.3e-146 521.2 491 57.2
Carub.0005s0719 Capsella rubella HOM05D005719 ORTHO05D007030 3.5e-145 519.2 445 60.2
AT3G28670 Arabidopsis thaliana HOM05D005719 ORTHO05D007030 7.9e-145 518.1 468 56.8
ECA240G4523 Erigeron canadensis HOM05D005719 ORTHO05D007030 1.3e-144 517.3 444 60.4
Sopen02g003330 Solanum pennellii HOM05D005719 ORTHO05D007030 1.7e-144 516.9 453 59.2
FAN18G0583 Fragaria x ananassa HOM05D005719 ORTHO05D007030 5.1e-144 515.4 427 63.9
Solyc02g014380.3 Solanum lycopersicum HOM05D005719 ORTHO05D007030 5.1e-144 515.4 453 58.7
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 1.5e-143 513.8 440 59.8
MSTRG.25002 Avicennia marina HOM05D005719 ORTHO05D007030 9.0e-141 504.6 451 57.9
Manes.05G187400 Manihot esculenta HOM05D005719 ORTHO05D007030 1.2e-140 504.2 365 67.4
C07p37630 Brassica napus HOM05D005719 ORTHO05D007030 1.3e-139 500.7 444 59.0
Ca_15541_v3 Cicer arietinum L. HOM05D005719 ORTHO05D007030 1.7e-139 500.4 464 57.1
BcaC06g33632 Brassica carinata HOM05D005719 ORTHO05D007030 2.9e-139 499.6 444 58.8
A06p40410 Brassica napus HOM05D005719 ORTHO05D007030 2.4e-138 496.5 469 55.7
BraA06t26959Z Brassica rapa HOM05D005719 ORTHO05D007030 2.4e-138 496.5 469 55.7
BolC7t44279H Brassica oleracea HOM05D005719 ORTHO05D007030 3.2e-138 496.1 445 58.9
Nn1g05685 Nelumbo nucifera HOM05D005719 ORTHO05D007030 3.9e-136 489.2 468 55.6
CAN.G1751.8 Capsicum annuum HOM05D005719 ORTHO05D007030 6.7e-136 488.4 429 57.8
Rhsim07G0214600 Rhododendron simsii HOM05D005719 ORTHO05D007030 1.3e-131 474.2 365 66.8
AUR62035419 Chenopodium quinoa HOM05D005719 ORTHO05D007030 7.1e-130 468.4 526 50.0
unitig_749.g13864 Utricularia gibba HOM05D005719 ORTHO05D000442 1.8e-128 463.8 472 51.3
Nitab4.5_0000681g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 3.0e-128 463.0 442 56.3
SGA_v2.0_scaffold14G07072 Striga asiatica HOM05D005719 ORTHO05D007030 1.3e-126 457.6 503 50.5
MELO3C003498.2 Cucumis melo HOM05D005719 ORTHO05D007030 2.1e-126 456.8 362 64.4
CAN.G1921.11 Capsicum annuum HOM05D005719 ORTHO05D007030 1.4e-125 454.1 454 53.3
PGSC0003DMG400019103 Solanum tuberosum HOM05D005719 ORTHO05D007030 4.3e-119 432.6 452 53.3
Peaxi162Scf01397g00011 Petunia axillaris HOM05D005719 ORTHO05D007030 4.1e-117 426.0 359 60.2
HPP92_028121 Vanilla planifolia HOM05D005719 ORTHO05D007030 1.7e-115 420.6 436 49.1
HPP92_020868 Vanilla planifolia HOM05D005719 ORTHO05D007030 2.2e-115 420.2 455 47.9
Ah.00g000110 Amaranthus hybridus HOM05D005719 ORTHO05D007030 1.4e-112 411.0 351 59.5
SalBow7G1913 Salvia bowleyana HOM05D005719 ORTHO05D007030 1.8e-104 384.0 399 51.4
CDE07G0720 Ceratophyllum demersum HOM05D005719 ORTHO05D007030 5.1e-104 382.5 435 47.6
Os08g0101400 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 8.8e-104 381.7 473 45.2
Potri.002G108700 Populus trichocarpa HOM05D005719 ORTHO05D007030 8.2e-102 375.2 250 74.8
Actinidia29649 Actinidia chinensis HOM05D005719 ORTHO05D007030 2.4e-101 373.6 354 56.8
PGSC0003DMG400019007 Solanum tuberosum HOM05D005719 ORTHO05D007030 7.0e-93 345.5 454 46.5
Pp3c26_6510 Physcomitrium patens HOM05D005719 ORTHO05D007030 5.9e-76 289.3 459 38.3
Mapoly0053s0027 Marchantia polymorpha HOM05D005719 ORTHO05D007030 9.5e-74 282.0 431 38.5
AUR62035705 Chenopodium quinoa HOM05D005719 ORTHO05D007030 2.9e-70 270.4 267 50.9
TAR381G0292 Trochodendron aralioides HOM05D005719 ORTHO05D007030 1.0e-67 261.9 188 70.2
Os10g0188900 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 2.1e-65 254.2 276 49.3
TAR381G1016 Trochodendron aralioides HOM05D005719 ORTHO05D007030 1.1e-61 241.9 199 62.8
Lju279A4T8 Lonicera japonica HOM05D005719 ORTHO05D007030 3.3e-58 230.3 173 65.9
BcaB04g19478 Brassica carinata HOM05D005719 ORTHO05D007030 1.2e-55 221.9 267 48.7
HanXRQChr16g0499811 Helianthus annuus HOM05D005719 ORTHO05D007030 1.2e-55 221.9 359 40.4
SMO118G0237 Selaginella moellendorffii HOM05D005719 ORTHO05D007030 1.4e-53 214.9 412 36.7
Zm00001eb198670 Zea mays HOM05D005719 ORTHO05D007030 1.1e-50 205.3 271 41.3
ATR0144G003 Amborella trichopoda HOM05D005719 ORTHO05D007030 2.4e-45 187.6 189 50.3
AUR62035707 Chenopodium quinoa HOM05D005719 ORTHO05D007030 1.8e-40 171.4 135 63.0
Duzib116G0315 Durio zibethinus HOM05D005719 ORTHO05D007030 2.6e-39 167.5 135 62.2
AagrBONN_evm.TU.Sc2ySwM_369.438 Anthoceros agrestis HOM05D005719 ORTHO05D007030 7.6e-39 166.0 281 37.0
Lju170A15T23 Lonicera japonica HOM05D005719 ORTHO05D007030 6.0e-36 156.4 110 70.0
Oeu035375.1 Olea europaea HOM05D005719 ORTHO05D007030 5.6e-34 149.8 129 58.1
CBR_g38241 Chara braunii HOM05D005719 ORTHO05D007030 1.3e-33 148.7 412 27.7
Hund16029 Selenicereus undatus HOM05D005719 ORTHO05D007030 1.1e-32 145.6 259 38.6
ATR0800G070 Amborella trichopoda HOM05D005719 ORTHO05D007030 1.8e-32 144.8 131 55.7
COL.COLO4_23153 Corchorus olitorius HOM05D005719 ORTHO05D007030 1.6e-28 131.7 167 50.3
Lju170A15T24 Lonicera japonica HOM05D005719 ORTHO05D007030 1.0e-27 129.0 109 63.3
SEGI_36882 Sequoiadendron giganteum HOM05D005719 ORTHO05D007030 3.3e-26 124.0 140 47.1
Peaxi162Scf01397g00010 Petunia axillaris HOM05D005719 ORTHO05D007030 2.4e-24 117.9 109 56.0
Lju279C4T1 Lonicera japonica HOM05D005719 ORTHO05D007030 2.2e-14 84.7 109 46.8
SEGI_23985 Sequoiadendron giganteum HOM05D005719 ORTHO05D007030 1.6e-12 78.6 111 35.1
C05p32060 Brassica napus HOM05D005719 ORTHO05D007030 4.3e-10 70.5 88 50.0
BolC5t31933H Brassica oleracea HOM05D005719 ORTHO05D007030 4.3e-10 70.5 88 50.0


User provided reference genes

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