Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G160300 Carya illinoinensis HOM05D005065 ORTHO05D005944 5.1e-111 404.4 208 100.0
Cfa013844 Carpinus fangiana HOM05D005065 ORTHO05D005944 2.2e-69 266.2 212 72.6
CiPaw.08G058800 Carya illinoinensis HOM05D005065 ORTHO05D005944 3.1e-68 262.3 211 69.7
Haze_22517 Corylus avellana HOM05D005065 ORTHO05D005944 1.5e-65 253.4 214 69.2
QL02p033454 Quercus lobata HOM05D005065 ORTHO05D005944 8.0e-56 221.1 203 64.5
Thecc.08G184600 Theobroma cacao HOM05D005065 ORTHO05D005944 1.1e-52 210.7 212 59.9
Duzib177G1167 Durio zibethinus HOM05D005065 ORTHO05D005944 8.6e-50 201.1 209 58.9
Lalb_Chr21g0305721 Lupinus albus HOM05D005065 ORTHO05D005944 1.1e-49 200.7 206 59.7
Potri.013G111700 Populus trichocarpa HOM05D005065 ORTHO05D005944 1.5e-49 200.3 210 58.1
Manes.18G101500 Manihot esculenta HOM05D005065 ORTHO05D005944 6.2e-48 194.9 209 59.3
Glyma.10G217400 Glycine max HOM05D005065 ORTHO05D005944 8.0e-48 194.5 209 57.9
Duzib211G0507 Durio zibethinus HOM05D005065 ORTHO05D005944 9.8e-46 187.6 210 55.7
Potri.019G082866 Populus trichocarpa HOM05D005065 ORTHO05D005944 1.7e-45 186.8 211 57.3
Lalb_Chr01g0010191 Lupinus albus HOM05D005065 ORTHO05D005944 2.2e-45 186.4 200 58.5
VMungo0720G1099 Vigna mungo HOM05D005065 ORTHO05D005944 2.2e-45 186.4 207 56.0
Phvul.007G088700 Phaseolus vulgaris HOM05D005065 ORTHO05D005944 1.4e-44 183.7 207 55.6
Ca_10622_v3 Cicer arietinum L. HOM05D005065 ORTHO05D005944 2.4e-44 183.0 188 59.0
Lj5g0001381 Lotus japonicus HOM05D005065 ORTHO05D005944 2.7e-43 179.5 208 53.4
TPR.G8826 Trifolium pratense HOM05D005065 ORTHO05D005944 6.0e-43 178.3 218 55.0
Lalb_Chr03g0036131 Lupinus albus HOM05D005065 ORTHO05D005944 1.2e-40 170.6 206 54.9
Psat6g187880 Pisum sativum HOM05D005065 ORTHO05D005944 1.2e-40 170.6 219 52.5
Gohir.A05G275300 Gossypium hirsutum HOM05D005065 ORTHO05D005944 1.6e-40 170.2 213 51.6
Lalb_Chr06g0162001 Lupinus albus HOM05D005065 ORTHO05D005944 6.2e-40 168.3 208 51.4
Gohir.A13G121100 Gossypium hirsutum HOM05D005065 ORTHO05D005944 8.1e-40 167.9 190 55.3
Gohir.D05G277400 Gossypium hirsutum HOM05D005065 ORTHO05D005944 8.1e-40 167.9 210 50.5
Gohir.D13G125200 Gossypium hirsutum HOM05D005065 ORTHO05D005944 1.8e-39 166.8 188 55.3
Gorai.013G140100 Gossypium raimondii HOM05D005065 ORTHO05D005944 1.8e-39 166.8 188 55.3
Gorai.009G290400 Gossypium raimondii HOM05D005065 ORTHO05D005944 3.1e-39 166.0 210 50.0
Ciclev10002433m.g Citrus clementina HOM05D005065 ORTHO05D005944 8.9e-39 164.5 217 50.2
Lalb_Chr02g0141751 Lupinus albus HOM05D005065 ORTHO05D005944 1.2e-38 164.1 139 62.6
TWI60G1480 Tripterygium wilfordii HOM05D005065 ORTHO05D005944 1.2e-38 164.1 199 54.3
Glyma.20G174600 Glycine max HOM05D005065 ORTHO05D005944 2.2e-37 159.8 142 63.4
Atru.chr13.1737 Acer truncatum HOM05D005065 ORTHO05D005944 1.4e-36 157.1 218 50.0
Manes.02G192500 Manihot esculenta HOM05D005065 ORTHO05D005944 4.1e-36 155.6 185 52.4
Cpa.g.sc66.33 Carica papaya HOM05D005065 ORTHO05D005944 9.2e-36 154.5 198 52.5
Prupe.8G058900 Prunus persica HOM05D005065 ORTHO05D005944 9.2e-36 154.5 235 50.2
Dinv15081 Davidia involucrata HOM05D005065 ORTHO05D005944 1.6e-35 153.7 191 53.4
Actinidia02576 Actinidia chinensis HOM05D005065 ORTHO05D005944 4.6e-35 152.1 165 53.9
Eucgr.F02608 Eucalyptus grandis HOM05D005065 ORTHO05D005944 6.6e-34 148.3 175 50.3
Hma1.2p1_0937F.1_g239030 Hydrangea macrophylla HOM05D005065 ORTHO05D005944 6.6e-34 148.3 194 47.4
Cc00_g13630 Coffea canephora HOM05D005065 ORTHO05D005944 1.9e-33 146.7 185 54.6
Oeu029996.1 Olea europaea HOM05D005065 ORTHO05D005944 3.3e-33 146.0 193 51.8
Dinv41716 Davidia involucrata HOM05D005065 ORTHO05D005944 1.6e-32 143.7 195 45.6
Lalb_Chr19g0129461 Lupinus albus HOM05D005065 ORTHO05D005944 2.1e-32 143.3 210 49.5
MSTRG.25443 Avicennia marina HOM05D005065 ORTHO05D005944 2.8e-32 142.9 175 51.4
Rhsim06G0094100 Rhododendron simsii HOM05D005065 ORTHO05D005944 4.7e-32 142.1 168 53.6
Sabra19G0094300 Salix brachista HOM05D005065 ORTHO05D005944 8.1e-32 141.4 173 56.6
Actinidia23336 Actinidia chinensis HOM05D005065 ORTHO05D005944 1.1e-31 141.0 145 52.4
MSTRG.1526 Avicennia marina HOM05D005065 ORTHO05D005944 1.1e-31 141.0 205 48.3
Gorai.006G130800 Gossypium raimondii HOM05D005065 ORTHO05D005944 1.4e-31 140.6 184 46.7
MD05G1042300 Malus domestica HOM05D005065 ORTHO05D005944 4.0e-31 139.0 213 48.8
Sabra13G0095100 Salix brachista HOM05D005065 ORTHO05D005944 5.2e-31 138.7 184 50.5
PGR042G0986 Punica granatum HOM05D005065 ORTHO05D005944 2.0e-30 136.7 191 48.2
Gohir.D09G113300 Gossypium hirsutum HOM05D005065 ORTHO05D005944 4.4e-30 135.6 184 46.2
ClCG11G008090 Citrullus lanatus HOM05D005065 ORTHO05D005944 7.6e-30 134.8 199 48.2
Peaxi162Scf00268g00105 Petunia axillaris HOM05D005065 ORTHO05D005944 1.7e-29 133.7 209 45.5
Nn1g08370 Nelumbo nucifera HOM05D005065 ORTHO05D005944 2.9e-29 132.9 220 45.0
RcHm_v2.0_Chr6g0270871 Rosa chinensis HOM05D005065 ORTHO05D005944 6.4e-29 131.7 224 46.4
Gohir.A09G116200 Gossypium hirsutum HOM05D005065 ORTHO05D005944 8.4e-29 131.3 184 45.7
MELO3C008125.2 Cucumis melo HOM05D005065 ORTHO05D005944 1.1e-28 131.0 199 47.7
FAN15G3279 Fragaria x ananassa HOM05D005065 ORTHO05D005944 1.1e-28 131.0 204 48.5
Sed0021334 Sechium edule HOM05D005065 ORTHO05D005944 4.2e-28 129.0 190 46.8
Rhsim11G0058500 Rhododendron simsii HOM05D005065 ORTHO05D005944 2.7e-27 126.3 177 48.6
MSTRG.22454 Avicennia marina HOM05D005065 ORTHO05D005944 3.5e-27 125.9 169 50.9
Nn5g27677 Nelumbo nucifera HOM05D005065 ORTHO05D005944 4.6e-27 125.6 216 41.7
Oeu017883.1 Olea europaea HOM05D005065 ORTHO05D005944 7.8e-27 124.8 196 43.4
Hma1.2p1_0060F.1_g032900 Hydrangea macrophylla HOM05D005065 ORTHO05D005944 1.0e-26 124.4 207 43.0
TAR624G0039 Trochodendron aralioides HOM05D005065 ORTHO05D005944 3.9e-26 122.5 216 42.6
BcaB03g14918 Brassica carinata HOM05D005065 ORTHO05D005944 8.7e-26 121.3 225 44.0
DCAR_011533 Daucus carota HOM05D005065 ORTHO05D005944 8.7e-26 121.3 205 42.9
Migut.C01259 Erythranthe guttata HOM05D005065 ORTHO05D005944 1.9e-25 120.2 185 44.9
PGSC0003DMG400014033 Solanum tuberosum HOM05D005065 ORTHO05D005944 3.3e-25 119.4 186 44.1
BcaB05g24697 Brassica carinata HOM05D005065 ORTHO05D005944 4.3e-25 119.0 210 44.3
BraA07t30683Z Brassica rapa HOM05D005065 ORTHO05D005944 9.6e-25 117.9 202 44.6
Peaxi162Scf01013g00001 Petunia axillaris HOM05D005065 ORTHO05D005944 1.2e-24 117.5 183 47.5
PSO782G1863 Papaver somniferum HOM05D005065 ORTHO05D005944 2.8e-24 116.3 179 45.8
A07p30470 Brassica napus HOM05D005065 ORTHO05D005944 3.6e-24 115.9 202 44.1
SalBow7G0321 Salvia bowleyana HOM05D005065 ORTHO05D005944 8.1e-24 114.8 188 45.7
BcaC03g15318 Brassica carinata HOM05D005065 ORTHO05D005944 1.1e-23 114.4 202 42.1
C02p29260 Brassica napus HOM05D005065 ORTHO05D005944 1.1e-23 114.4 202 42.1
BolC2t08977H Brassica oleracea HOM05D005065 ORTHO05D005944 1.1e-23 114.4 202 42.1
BraA07t31379Z Brassica rapa HOM05D005065 ORTHO05D005944 1.1e-23 114.4 229 42.8
CARHR064790 Cardamine hirsuta HOM05D005065 ORTHO05D005944 1.1e-23 114.4 209 48.3
PGSC0003DMG400026113 Solanum tuberosum HOM05D005065 ORTHO05D005944 2.4e-23 113.2 183 47.0
BolC6t38629H Brassica oleracea HOM05D005065 ORTHO05D005944 3.1e-23 112.8 216 43.1
Eucgr.F04121 Eucalyptus grandis HOM05D005065 ORTHO05D005944 4.0e-23 112.5 150 42.7
Lsat_1_v5_gn_1_10621 Lactuca sativa HOM05D005065 ORTHO05D005944 5.3e-23 112.1 143 51.0
Medtr1g096610 Medicago truncatula HOM05D005065 ORTHO05D005944 5.3e-23 112.1 213 40.8
Solyc06g065340.1 Solanum lycopersicum HOM05D005065 ORTHO05D005944 5.3e-23 112.1 186 45.7
CAN.G199.8 Capsicum annuum HOM05D005065 ORTHO05D005944 6.9e-23 111.7 166 42.8
Thhalv10019856m.g Eutrema salsugineum HOM05D005065 ORTHO05D005944 9.0e-23 111.3 205 43.9
EL10Ac1g00090 Beta vulgaris HOM05D005065 ORTHO05D005944 1.2e-22 110.9 202 42.1
BcaC08g46641 Brassica carinata HOM05D005065 ORTHO05D005944 2.0e-22 110.2 221 42.1
C06p35230 Brassica napus HOM05D005065 ORTHO05D005944 2.0e-22 110.2 218 42.7
SGA_v2.0_scaffold149G36582 Striga asiatica HOM05D005065 ORTHO05D005944 2.6e-22 109.8 186 41.9
A02p17610 Brassica napus HOM05D005065 ORTHO05D005944 3.4e-22 109.4 198 41.9
BraA02t06807Z Brassica rapa HOM05D005065 ORTHO05D005944 3.4e-22 109.4 198 41.9
HanXRQChr04g0107491 Helianthus annuus HOM05D005065 ORTHO05D005944 3.4e-22 109.4 165 47.9
Solyc11g018710.1 Solanum lycopersicum HOM05D005065 ORTHO05D005944 3.4e-22 109.4 190 41.1
Sopen11g009740 Solanum pennellii HOM05D005065 ORTHO05D005944 3.4e-22 109.4 190 41.6
AL2G31580 Arabidopsis lyrata HOM05D005065 ORTHO05D005944 4.4e-22 109.0 209 44.0
BolC6t39660H Brassica oleracea HOM05D005065 ORTHO05D005944 7.6e-22 108.2 208 42.3
C06p46070 Brassica napus HOM05D005065 ORTHO05D005944 9.9e-22 107.8 221 41.6
CSS0016137 Camellia sinensis var. sinensis HOM05D005065 ORTHO05D005944 9.9e-22 107.8 203 42.4
Carub.0002s1875 Capsella rubella HOM05D005065 ORTHO05D005944 1.7e-21 107.1 204 46.1
Ah.05g178140 Amaranthus hybridus HOM05D005065 ORTHO05D005944 2.2e-21 106.7 204 42.6
AT1G71970 Arabidopsis thaliana HOM05D005065 ORTHO05D005944 2.9e-21 106.3 222 42.8
THA.LOC104800116 Tarenaya hassleriana HOM05D005065 ORTHO05D005944 4.9e-21 105.5 203 44.3
SGA_v2.0_scaffold24G10554 Striga asiatica HOM05D005065 ORTHO05D005944 6.4e-21 105.1 217 38.2
Aqoxy5G02380 Aquilegia oxysepala HOM05D005065 ORTHO05D005944 8.4e-21 104.8 175 44.6
Sopen06g023830 Solanum pennellii HOM05D005065 ORTHO05D005944 1.1e-20 104.4 167 44.9
PGR102G0471 Punica granatum HOM05D005065 ORTHO05D005944 2.4e-20 103.2 182 45.1
CANSAT25G3119 Cannabis sativa HOM05D005065 ORTHO05D005944 4.2e-20 102.4 174 42.5
Sp5g27040 Schrenkiella parvula HOM05D005065 ORTHO05D005944 5.4e-20 102.1 205 42.0
BcaB03g15639 Brassica carinata HOM05D005065 ORTHO05D005944 7.1e-20 101.7 209 41.6
Oeu021210.1 Olea europaea HOM05D005065 ORTHO05D005944 9.3e-20 101.3 184 44.0
Lsat_1_v5_gn_6_109661 Lactuca sativa HOM05D005065 ORTHO05D005944 1.2e-19 100.9 167 43.7
THA.LOC104809741 Tarenaya hassleriana HOM05D005065 ORTHO05D005944 1.2e-19 100.9 191 44.0
Carub.0001s2220 Capsella rubella HOM05D005065 ORTHO05D005944 7.8e-19 98.2 195 40.0
Nitab4.5_0000277g0040 Nicotiana tabacum HOM05D005065 ORTHO05D005944 1.7e-18 97.1 157 43.3
Sp1g20190 Schrenkiella parvula HOM05D005065 ORTHO05D005944 1.5e-17 94.0 171 42.1
AT1G22680 Arabidopsis thaliana HOM05D005065 ORTHO05D005944 3.3e-17 92.8 196 40.8
ATR0003G028 Amborella trichopoda HOM05D005065 ORTHO05D005944 4.3e-17 92.4 226 36.7
AL1G36220 Arabidopsis lyrata HOM05D005065 ORTHO05D005944 4.3e-17 92.4 160 45.0
CARHR023050 Cardamine hirsuta HOM05D005065 ORTHO05D005944 7.3e-17 91.7 179 41.3
Aa31LG4G8650 Aethionema arabicum HOM05D005065 ORTHO05D005944 1.3e-16 90.9 183 41.5
HanXRQChr05g0150531 Helianthus annuus HOM05D005065 ORTHO05D005944 1.3e-16 90.9 167 40.1
FAN24G2022 Fragaria x ananassa HOM05D005065 ORTHO05D005944 3.6e-16 89.4 170 45.9
Nitab4.5_0009211g0010 Nicotiana tabacum HOM05D005065 ORTHO05D005944 1.8e-15 87.0 143 44.1
Oeu025521.1 Olea europaea HOM05D005065 ORTHO05D005944 1.8e-15 87.0 168 42.3
FAN20G1873 Fragaria x ananassa HOM05D005065 ORTHO05D005944 2.4e-15 86.7 171 45.6
MBI09_g14012_MAGBIO Magnolia biondii HOM05D005065 ORTHO05D005944 1.2e-14 84.3 182 37.9
Rhsim11G0058400 Rhododendron simsii HOM05D005065 ORTHO05D005944 3.4e-14 82.8 124 47.6
ATR0820G021 Amborella trichopoda HOM05D005065 ORTHO05D005944 1.3e-13 80.9 226 34.5
FvH4_2g11630 Fragaria vesca HOM05D005065 ORTHO05D005944 2.9e-13 79.7 123 51.2
SGA_v2.0_scaffold118G32491 Striga asiatica HOM05D005065 ORTHO05D005944 7.1e-12 75.1 151 37.7
A07p38140 Brassica napus HOM05D005065 ORTHO05D005944 2.7e-11 73.2 149 41.6
Sc23g0001280 Simmondsia chinensis HOM05D005065 ORTHO05D005944 6.0e-11 72.0 164 32.9
Aa31LG7G6580 Aethionema arabicum HOM05D005065 ORTHO05D005944 3.9e-10 69.3 229 34.9
CDE06G2798 Ceratophyllum demersum HOM05D005065 ORTHO05D005944 1.9e-09 67.0 172 39.5
Nitab4.5_0002483g0030 Nicotiana tabacum HOM05D005065 ORTHO05D005944 3.3e-09 66.2 135 38.5
HPP92_009270 Vanilla planifolia HOM05D005065 ORTHO05D005944 3.7e-08 62.8 211 33.6
HPP92_003138 Vanilla planifolia HOM05D005065 ORTHO05D005944 4.8e-08 62.4 152 35.5
TAR381G1423 Trochodendron aralioides HOM05D005065 ORTHO05D005944 9.0e-07 58.2 53 58.5
HPP92_005697 Vanilla planifolia HOM05D005065 ORTHO05D005944 9.0e-07 58.2 141 31.2
HPP92_006868 Vanilla planifolia HOM05D064031 ORTHO05D005944 2.0e-06 57.0 169 32.5
HPP92_006851 Vanilla planifolia HOM05D064031 ORTHO05D005944 2.6e-06 56.6 169 33.1


User provided reference genes

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