Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G158800 Carya illinoinensis HOM05D006275 ORTHO05D007839 4.2e-77 291.2 138 100.0
FAN15G2697 Fragaria x ananassa HOM05D006275 ORTHO05D007839 2.1e-52 209.1 139 76.3
RcHm_v2.0_Chr6g0301461 Rosa chinensis HOM05D006275 ORTHO05D007839 2.1e-52 209.1 139 74.8
Potri.002G033300 Populus trichocarpa HOM05D006275 ORTHO05D007839 2.7e-52 208.8 139 74.1
Prupe.1G376100 Prunus persica HOM05D006275 ORTHO05D007839 3.6e-52 208.4 140 72.9
FAN27G1059 Fragaria x ananassa HOM05D006275 ORTHO05D007839 8.0e-52 207.2 139 75.5
FvH4_2g39490 Fragaria vesca HOM05D006275 ORTHO05D007839 1.8e-51 206.1 144 73.6
Gohir.A05G192200 Gossypium hirsutum HOM05D006275 ORTHO05D007839 5.2e-51 204.5 139 75.5
Gohir.D05G195400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 5.2e-51 204.5 139 76.3
MD15G1023800 Malus domestica HOM05D006275 ORTHO05D007839 6.7e-51 204.1 143 72.0
Gorai.009G200300 Gossypium raimondii HOM05D006275 ORTHO05D007839 4.4e-50 201.4 139 75.5
Haze_22533 Corylus avellana HOM05D006275 ORTHO05D007839 2.8e-49 198.7 113 82.3
Cpa.g.c33902 Carica papaya HOM05D006275 ORTHO05D007839 8.2e-49 197.2 141 71.6
Thecc.08G031000 Theobroma cacao HOM05D006275 ORTHO05D007839 8.2e-49 197.2 139 74.8
Cfa013858 Carpinus fangiana HOM05D006275 ORTHO05D007839 1.1e-48 196.8 114 80.7
GSVIVG01009748001 Vitis vinifera HOM05D006275 ORTHO05D007839 1.8e-48 196.1 139 74.1
COL.COLO4_26271 Corchorus olitorius HOM05D006275 ORTHO05D007839 3.1e-48 195.3 139 72.7
ClCG05G018790 Citrullus lanatus HOM05D006275 ORTHO05D007839 5.3e-48 194.5 140 70.7
CsaV3_3G045380 Cucumis sativus L. HOM05D006275 ORTHO05D007839 9.1e-48 193.7 139 69.8
TWI36G0893 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 9.1e-48 193.7 138 70.3
Sed0006872 Sechium edule HOM05D006275 ORTHO05D007839 1.2e-47 193.4 138 68.8
C06p49340 Brassica napus HOM05D006275 ORTHO05D007839 2.0e-47 192.6 146 69.2
MELO3C003811.2 Cucumis melo HOM05D006275 ORTHO05D007839 2.6e-47 192.2 139 69.1
BcaC08g47361 Brassica carinata HOM05D006275 ORTHO05D007839 3.5e-47 191.8 146 69.2
BolC6t39969H Brassica oleracea HOM05D006275 ORTHO05D007839 3.5e-47 191.8 146 69.2
Duzib093G0437 Durio zibethinus HOM05D006275 ORTHO05D007839 3.5e-47 191.8 140 72.9
A07p40910 Brassica napus HOM05D006275 ORTHO05D007839 4.5e-47 191.4 146 68.5
C04p03490 Brassica napus HOM05D006275 ORTHO05D007839 4.5e-47 191.4 145 69.0
BraA07t31631Z Brassica rapa HOM05D006275 ORTHO05D007839 4.5e-47 191.4 146 68.5
A05p02860 Brassica napus HOM05D006275 ORTHO05D007839 7.7e-47 190.7 145 69.0
BraA05t19277Z Brassica rapa HOM05D006275 ORTHO05D007839 7.7e-47 190.7 145 69.0
MD08G1027600 Malus domestica HOM05D006275 ORTHO05D007839 1.0e-46 190.3 141 68.8
BcaC02g12477 Brassica carinata HOM05D006275 ORTHO05D007839 1.3e-46 189.9 145 69.0
BolC4t21983H Brassica oleracea HOM05D006275 ORTHO05D007839 1.3e-46 189.9 145 69.0
CANSAT56G0974 Cannabis sativa HOM05D006275 ORTHO05D007839 1.3e-46 189.9 138 68.1
Dinv39443 Davidia involucrata HOM05D006275 ORTHO05D007839 1.3e-46 189.9 138 69.6
Manes.05G156800 Manihot esculenta HOM05D006275 ORTHO05D007839 1.3e-46 189.9 140 70.7
TAR628G1199 Trochodendron aralioides HOM05D006275 ORTHO05D007839 1.3e-46 189.9 143 72.0
Thhalv10019294m.g Eutrema salsugineum HOM05D006275 ORTHO05D007839 2.2e-46 189.1 150 66.7
Sabra02G0026900 Salix brachista HOM05D006275 ORTHO05D007839 2.2e-46 189.1 114 79.8
BcaC08g47007 Brassica carinata HOM05D006275 ORTHO05D007839 2.9e-46 188.7 149 66.4
Ah.05g177020 Amaranthus hybridus HOM05D006275 ORTHO05D007839 3.8e-46 188.3 139 68.3
AL2G35280 Arabidopsis lyrata HOM05D006275 ORTHO05D007839 3.8e-46 188.3 147 67.3
Lalb_Chr22g0354641 Lupinus albus HOM05D006275 ORTHO05D007839 3.8e-46 188.3 138 67.4
Nn1g04018 Nelumbo nucifera HOM05D006275 ORTHO05D007839 5.0e-46 188.0 139 69.1
arahy.Tifrunner.gnm1.ann1.RSD13X Arachis hypogaea HOM05D006275 ORTHO05D007839 6.5e-46 187.6 138 67.4
arahy.Tifrunner.gnm1.ann1.T5GRUU Arachis hypogaea HOM05D006275 ORTHO05D007839 6.5e-46 187.6 138 67.4
Sp5g30490 Schrenkiella parvula HOM05D006275 ORTHO05D007839 1.1e-45 186.8 148 66.2
Sc02g0005820 Simmondsia chinensis HOM05D006275 ORTHO05D007839 1.1e-45 186.8 140 70.0
Carub.0002s2219 Capsella rubella HOM05D006275 ORTHO05D007839 1.5e-45 186.4 152 68.4
AT1G75350 Arabidopsis thaliana HOM05D006275 ORTHO05D007839 1.9e-45 186.0 149 66.4
arahy.Tifrunner.gnm1.ann1.W9L06J Arachis hypogaea HOM05D006275 ORTHO05D007839 5.5e-45 184.5 136 67.6
arahy.Tifrunner.gnm1.ann1.WR55YC Arachis hypogaea HOM05D006275 ORTHO05D007839 5.5e-45 184.5 136 67.6
PGR031G1371 Punica granatum HOM05D006275 ORTHO05D007839 5.5e-45 184.5 138 66.7
Ciclev10002669m.g Citrus clementina HOM05D006275 ORTHO05D007839 9.4e-45 183.7 141 68.8
THA.LOC104811376 Tarenaya hassleriana HOM05D006275 ORTHO05D007839 1.2e-44 183.3 149 66.4
PSO764G0160 Papaver somniferum HOM05D006275 ORTHO05D007839 1.6e-44 183.0 145 64.1
Medtr1g022450 Medicago truncatula HOM05D006275 ORTHO05D007839 2.1e-44 182.6 140 67.9
Phvul.001G012400 Phaseolus vulgaris HOM05D006275 ORTHO05D007839 2.1e-44 182.6 141 68.1
CSS0002686 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 2.7e-44 182.2 141 66.7
CSS0030866 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 2.7e-44 182.2 141 66.7
PSO731G0021 Papaver somniferum HOM05D006275 ORTHO05D007839 3.6e-44 181.8 145 64.8
unitig_46.g17937 Utricularia gibba HOM05D006275 ORTHO05D007839 3.6e-44 181.8 138 68.1
Cc09_g08950 Coffea canephora HOM05D006275 ORTHO05D007839 6.1e-44 181.0 139 68.3
Atru.chr13.432 Acer truncatum HOM05D006275 ORTHO05D007839 8.0e-44 180.6 104 83.7
CARHR068700 Cardamine hirsuta HOM05D006275 ORTHO05D007839 3.0e-43 178.7 148 64.2
VMungo0647G0412 Vigna mungo HOM05D006275 ORTHO05D007839 4.0e-43 178.3 141 66.7
Migut.J00614 Erythranthe guttata HOM05D006275 ORTHO05D007839 1.5e-42 176.4 139 66.2
Eucgr.F01878 Eucalyptus grandis HOM05D006275 ORTHO05D007839 2.0e-42 176.0 136 66.2
MSTRG.1264 Avicennia marina HOM05D006275 ORTHO05D007839 2.6e-42 175.6 139 66.9
EL10Ac1g00643 Beta vulgaris HOM05D006275 ORTHO05D007839 3.4e-42 175.3 129 65.1
Aa31LG4G5560 Aethionema arabicum HOM05D006275 ORTHO05D007839 4.4e-42 174.9 148 66.9
Nitab4.5_0003265g0060 Nicotiana tabacum HOM05D006275 ORTHO05D007839 4.4e-42 174.9 136 64.7
SalBow7G2217 Salvia bowleyana HOM05D006275 ORTHO05D007839 7.5e-42 174.1 126 68.3
AUR62014497 Chenopodium quinoa HOM05D006275 ORTHO05D007839 1.3e-41 173.3 128 66.4
Nitab4.5_0009228g0020 Nicotiana tabacum HOM05D006275 ORTHO05D007839 1.3e-41 173.3 136 64.0
Oeu002824.1 Olea europaea HOM05D006275 ORTHO05D007839 1.7e-41 172.9 139 66.2
Aqoxy5G01584 Aquilegia oxysepala HOM05D006275 ORTHO05D007839 2.2e-41 172.6 143 63.6
AUR62038041 Chenopodium quinoa HOM05D006275 ORTHO05D007839 2.2e-41 172.6 126 67.5
Oeu047769.1 Olea europaea HOM05D006275 ORTHO05D007839 2.8e-41 172.2 139 64.7
Ca_18049_v3 Cicer arietinum L. HOM05D006275 ORTHO05D007839 4.8e-41 171.4 139 63.3
Glyma.14G072400 Glycine max HOM05D006275 ORTHO05D007839 6.3e-41 171.0 139 64.7
Psat6g009240 Pisum sativum HOM05D006275 ORTHO05D007839 1.8e-40 169.5 140 63.6
Solyc04g080630.4 Solanum lycopersicum HOM05D006275 ORTHO05D007839 2.4e-40 169.1 136 62.5
Migut.N00484 Erythranthe guttata HOM05D006275 ORTHO05D007839 4.1e-40 168.3 138 64.5
FAN20G1429 Fragaria x ananassa HOM05D006275 ORTHO05D007839 4.1e-40 168.3 111 72.1
Peaxi162Scf00140g10025 Petunia axillaris HOM05D006275 ORTHO05D007839 4.1e-40 168.3 126 67.5
SGA_v2.0_scaffold201G41391 Striga asiatica HOM05D006275 ORTHO05D007839 5.4e-40 167.9 139 61.2
TPR.G20152 Trifolium pratense HOM05D006275 ORTHO05D007839 7.0e-40 167.5 130 65.4
ECA232G2653 Erigeron canadensis HOM05D006275 ORTHO05D007839 1.6e-39 166.4 140 60.0
HanXRQChr09g0268981 Helianthus annuus HOM05D006275 ORTHO05D007839 1.6e-39 166.4 142 61.3
CSS0039262 Camellia sinensis var. sinensis HOM05D006275 ORTHO05D007839 2.0e-39 166.0 138 62.3
Lj5g0023115 Lotus japonicus HOM05D006275 ORTHO05D007839 2.0e-39 166.0 138 61.6
PGSC0003DMG400003696 Solanum tuberosum HOM05D006275 ORTHO05D007839 2.0e-39 166.0 136 62.5
HanXRQChr16g0501501 Helianthus annuus HOM05D006275 ORTHO05D007839 4.5e-39 164.9 141 62.4
Lsat_1_v5_gn_4_117720 Lactuca sativa HOM05D006275 ORTHO05D007839 4.5e-39 164.9 146 59.6
DCAR_022467 Daucus carota HOM05D006275 ORTHO05D007839 1.3e-38 163.3 126 62.7
Glyma.17G252600 Glycine max HOM05D006275 ORTHO05D007839 1.7e-38 162.9 103 76.7
Actinidia37997 Actinidia chinensis HOM05D006275 ORTHO05D007839 2.5e-37 159.1 124 62.9
CDE02G2235 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 5.5e-37 157.9 134 63.4
Sopen04g034220 Solanum pennellii HOM05D006275 ORTHO05D007839 5.5e-37 157.9 100 74.0
ATR0568G031 Amborella trichopoda HOM05D006275 ORTHO05D007839 7.2e-37 157.5 101 74.3
HPP92_009679 Vanilla planifolia HOM05D006275 ORTHO05D007839 7.2e-37 157.5 124 61.3
CDE06G0798 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 1.6e-36 156.4 101 75.2
Pp3c4_22510 Physcomitrium patens HOM05D006275 ORTHO05D007839 3.4e-34 148.7 104 68.3
Rhsim07G0241500 Rhododendron simsii HOM05D006275 ORTHO05D007839 3.7e-33 145.2 140 54.3
RhsimUnG0236400 Rhododendron simsii HOM05D006275 ORTHO05D007839 3.7e-33 145.2 140 54.3
Pp3c3_430 Physcomitrium patens HOM05D006275 ORTHO05D007839 2.0e-31 139.4 134 54.5
AagrBONN_evm.TU.Sc2ySwM_368.2624 Anthoceros agrestis HOM05D006275 ORTHO05D007839 3.5e-31 138.7 102 61.8
Mapoly0051s0056 Marchantia polymorpha HOM05D006275 ORTHO05D007839 3.5e-31 138.7 102 63.7
Pp3c13_7030 Physcomitrium patens HOM05D006275 ORTHO05D007839 4.5e-31 138.3 104 59.6
vmacro04538 Vaccinium macrocarpon HOM05D006275 ORTHO05D007839 1.7e-30 136.3 114 58.8
CBR_g52135 Chara braunii HOM05D006275 ORTHO05D007839 8.0e-28 127.5 104 58.7
QL02p009087 Quercus lobata HOM05D006275 ORTHO05D007839 1.0e-27 127.1 77 81.8
SEGI_04934 Sequoiadendron giganteum HOM05D006275 ORTHO05D007839 6.8e-27 124.4 138 48.6
Duzib041G0262 Durio zibethinus HOM05D006275 ORTHO05D007839 2.2e-25 119.4 78 79.5
SMO117G0016 Selaginella moellendorffii HOM05D006275 ORTHO05D007839 4.9e-25 118.2 92 55.4
Os01g0633000 Oryza sativa ssp. japonica HOM05D006275 ORTHO05D007839 1.6e-23 113.2 108 48.1
Zm00001eb159080 Zea mays HOM05D006275 ORTHO05D007839 2.7e-23 112.5 109 49.5
Gohir.D12G058400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 1.5e-21 106.7 74 68.9
Cre08.g365400 Chlamydomonas reinhardtii HOM05D006275 ORTHO05D007839 3.3e-21 105.5 121 47.1
BcaC09g48250 Brassica carinata HOM05D006275 ORTHO05D007839 7.3e-21 104.4 57 80.7
Gorai.010G176600 Gossypium raimondii HOM05D006275 ORTHO05D007839 3.6e-20 102.1 75 69.3
TWI56G0783 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 5.8e-18 94.7 58 79.3
MCO12G376 Micromonas commoda HOM05D006275 ORTHO05D007839 1.7e-17 93.2 76 50.0
BcaC05g28396 Brassica carinata HOM05D006275 ORTHO05D003437 1.1e-11 73.9 65 60.0
Sabra05G0177600 Salix brachista HOM05D006275 ORTHO05D007839 1.9e-08 63.2 55 54.5


User provided reference genes

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