Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G156900 Carya illinoinensis HOM05D007079 ORTHO05D009006 4.5e-208 727.6 356 100.0
Cfa013875 Carpinus fangiana HOM05D007079 ORTHO05D009006 4.7e-157 558.1 355 76.9
Haze_22555 Corylus avellana HOM05D007079 ORTHO05D009006 1.4e-156 556.6 372 75.0
QL02p009607 Quercus lobata HOM05D007079 ORTHO05D009006 3.2e-153 545.4 353 75.9
TWI56G1128 Tripterygium wilfordii HOM05D007079 ORTHO05D009006 5.1e-127 458.4 311 72.7
Sabra02G0025400 Salix brachista HOM05D007079 ORTHO05D009006 3.1e-124 449.1 350 66.6
Thecc.08G033400 Theobroma cacao HOM05D007079 ORTHO05D009006 5.3e-124 448.4 355 63.7
Duzib093G0231 Durio zibethinus HOM05D007079 ORTHO05D009006 1.0e-122 444.1 360 63.6
GSVIVG01009772001 Vitis vinifera HOM05D007079 ORTHO05D009006 1.0e-122 444.1 356 63.8
Atru.chr13.409 Acer truncatum HOM05D007079 ORTHO05D009006 1.3e-122 443.7 356 64.3
COL.COLO4_26243 Corchorus olitorius HOM05D007079 ORTHO05D009006 6.5e-122 441.4 355 63.7
Potri.002G031500 Populus trichocarpa HOM05D007079 ORTHO05D009006 3.3e-118 429.1 350 65.1
FvH4_2g39320 Fragaria vesca HOM05D007079 ORTHO05D009006 1.3e-117 427.2 300 69.3
Hma1.2p1_0469F.1_g158910 Hydrangea macrophylla HOM05D007079 ORTHO05D009006 1.3e-117 427.2 354 60.5
RcHm_v2.0_Chr6g0301681 Rosa chinensis HOM05D007079 ORTHO05D009006 6.3e-117 424.9 301 68.8
Prupe.1G374300 Prunus persica HOM05D007079 ORTHO05D009006 8.2e-117 424.5 302 70.5
Gorai.009G271700 Gossypium raimondii HOM05D007079 ORTHO05D009006 1.4e-116 423.7 355 59.7
Actinidia15361 Actinidia chinensis HOM05D007079 ORTHO05D009006 4.1e-116 422.2 354 59.3
ClCG08G014740 Citrullus lanatus HOM05D007079 ORTHO05D009006 1.5e-115 420.2 348 60.1
CSS0042333 Camellia sinensis var. sinensis HOM05D007079 ORTHO05D009006 5.9e-115 418.3 354 59.6
Ciclev10003294m.g Citrus clementina HOM05D007079 ORTHO05D009006 2.5e-113 412.9 360 59.7
CsaV3_2G029020 Cucumis sativus L. HOM05D007079 ORTHO05D009006 3.2e-113 412.5 313 65.2
Rhsim06G0028600 Rhododendron simsii HOM05D007079 ORTHO05D009006 2.7e-112 409.5 358 60.6
TAR376G0129 Trochodendron aralioides HOM05D007079 ORTHO05D009006 1.4e-111 407.1 333 59.8
MELO3C010968.2 Cucumis melo HOM05D007079 ORTHO05D009006 5.1e-111 405.2 343 59.5
MD08G1024600 Malus domestica HOM05D007079 ORTHO05D009006 6.7e-111 404.8 301 66.8
Solyc02g089890.4 Solanum lycopersicum HOM05D002466 ORTHO05D009006 4.3e-110 402.1 354 56.8
PGSC0003DMG400010042 Solanum tuberosum HOM05D007079 ORTHO05D009006 4.3e-110 402.1 354 56.2
Oeu032890.1 Olea europaea HOM05D007079 ORTHO05D009006 1.7e-109 400.2 344 59.3
PGR031G2472 Punica granatum HOM05D007079 ORTHO05D009006 1.4e-108 397.1 352 57.1
Migut.K00854 Erythranthe guttata HOM05D007079 ORTHO05D009006 1.8e-108 396.7 354 55.6
Sed0004812 Sechium edule HOM05D007079 ORTHO05D009006 2.4e-108 396.4 313 62.6
Sopen02g034590 Solanum pennellii HOM05D007079 ORTHO05D009006 4.1e-108 395.6 354 56.2
Aqoxy6G01196 Aquilegia oxysepala HOM05D007079 ORTHO05D009006 4.5e-107 392.1 298 65.4
MSTRG.15412 Avicennia marina HOM05D007079 ORTHO05D009006 4.5e-107 392.1 356 56.7
HanXRQChr09g0264171 Helianthus annuus HOM05D007079 ORTHO05D009006 4.5e-107 392.1 348 58.3
Lj4A133T11 Lonicera japonica HOM05D007079 ORTHO05D009006 7.7e-107 391.3 295 65.4
Cc07_g05190 Coffea canephora HOM05D007079 ORTHO05D009006 1.0e-106 391.0 297 62.6
Lalb_Chr22g0354571 Lupinus albus HOM05D007079 ORTHO05D009006 1.0e-106 391.0 316 60.4
vmacro21681 Vaccinium macrocarpon HOM05D007079 ORTHO05D009006 1.7e-106 390.2 364 56.9
Lj5g0022889 Lotus japonicus HOM05D007079 ORTHO05D009006 1.1e-105 387.5 301 62.8
Ca_13380_v3 Cicer arietinum L. HOM05D007079 ORTHO05D009006 1.9e-105 386.7 298 64.8
CAN.G836.5 Capsicum annuum HOM05D007079 ORTHO05D009006 2.5e-105 386.3 296 62.8
Sc02g0005670 Simmondsia chinensis HOM05D007079 ORTHO05D009006 2.5e-105 386.3 352 56.8
Nn5g29708 Nelumbo nucifera HOM05D007079 ORTHO05D009006 1.6e-104 383.6 307 62.5
Manes.05G155100 Manihot esculenta HOM05D007079 ORTHO05D009006 2.7e-104 382.9 273 70.3
Ca_30048_v3 Cicer arietinum L. HOM05D007079 ORTHO05D009006 3.6e-104 382.5 296 64.5
TPR.G30477 Trifolium pratense HOM05D007079 ORTHO05D009006 4.7e-104 382.1 300 64.3
Hund26893 Selenicereus undatus HOM05D007079 ORTHO05D009006 6.1e-104 381.7 300 61.3
Glyma.17G253400 Glycine max HOM05D007079 ORTHO05D009006 2.3e-103 379.8 298 62.1
Gohir.D05G259900 Gossypium hirsutum HOM05D007079 ORTHO05D009006 5.1e-103 378.6 317 59.3
THA.LOC104813812 Tarenaya hassleriana HOM05D007079 ORTHO05D009006 1.5e-102 377.1 359 54.6
Sp1g17520 Schrenkiella parvula HOM05D007079 ORTHO05D009006 2.0e-102 376.7 356 55.3
ECA238G0935 Erigeron canadensis HOM05D007079 ORTHO05D009006 9.7e-102 374.4 363 53.4
Gohir.A05G258332 Gossypium hirsutum HOM05D007079 ORTHO05D009006 9.7e-102 374.4 317 59.0
Phvul.001G011600 Phaseolus vulgaris HOM05D007079 ORTHO05D009006 1.7e-101 373.6 295 61.4
AUR62014482 Chenopodium quinoa HOM05D007079 ORTHO05D009006 3.7e-101 372.5 298 61.4
A06p15810 Brassica napus HOM05D007079 ORTHO05D009006 1.8e-100 370.2 329 58.1
Medtr1g022940 Medicago truncatula HOM05D007079 ORTHO05D009006 1.8e-100 370.2 298 62.4
MBI16_g23831_MAGBIO Magnolia biondii HOM05D007079 ORTHO05D009006 9.1e-100 367.9 358 55.0
BolC5t30520H Brassica oleracea HOM05D007079 ORTHO05D009006 1.2e-99 367.5 297 62.0
Carub.0001s1923 Capsella rubella HOM05D007079 ORTHO05D009006 1.2e-99 367.5 331 56.8
AT1G19690 Arabidopsis thaliana HOM05D007079 ORTHO05D009006 1.6e-99 367.1 353 54.1
arahy.Tifrunner.gnm1.ann1.1TI5B0 Arachis hypogaea HOM05D007079 ORTHO05D009006 1.6e-99 367.1 297 63.6
BraA06t24691Z Brassica rapa HOM05D007079 ORTHO05D009006 1.6e-99 367.1 335 57.6
BcaB07g31982 Brassica carinata HOM05D007079 ORTHO05D009006 2.6e-99 366.3 298 61.1
CANSAT78G0946 Cannabis sativa HOM05D007079 ORTHO05D009006 4.5e-99 365.5 275 66.9
VMungo0647G1101 Vigna mungo HOM05D007079 ORTHO05D009006 4.5e-99 365.5 309 57.9
Lsat_1_v5_gn_2_87400 Lactuca sativa HOM05D007079 ORTHO05D009006 5.9e-99 365.2 351 53.3
C05p18130 Brassica napus HOM05D007079 ORTHO05D009006 7.7e-99 364.8 297 62.0
Psat6g009680 Pisum sativum HOM05D007079 ORTHO05D009006 1.0e-98 364.4 348 55.7
SGA_v2.0_scaffold34G13653 Striga asiatica HOM05D007079 ORTHO05D009006 1.1e-97 360.9 356 54.8
Thhalv10008056m.g Eutrema salsugineum HOM05D007079 ORTHO05D009006 1.5e-97 360.5 354 54.2
AL1G32410 Arabidopsis lyrata HOM05D007079 ORTHO05D009006 1.9e-97 360.1 304 59.9
FAN27G2216 Fragaria x ananassa HOM05D007079 ORTHO05D009006 1.9e-97 360.1 299 61.2
Aa31LG7G4270 Aethionema arabicum HOM05D007079 ORTHO05D009006 2.3e-95 353.2 295 60.3
Glyma.14G071200 Glycine max HOM05D007079 ORTHO05D009006 4.0e-95 352.4 291 60.1
Dinv39455 Davidia involucrata HOM05D007079 ORTHO05D009006 8.8e-95 351.3 243 71.6
Ah.05g180850 Amaranthus hybridus HOM05D007079 ORTHO05D009006 4.4e-94 349.0 331 53.2
PSO541G3287 Papaver somniferum HOM05D007079 ORTHO05D009006 1.7e-93 347.1 302 58.3
Eucgr.F01861 Eucalyptus grandis HOM05D007079 ORTHO05D009006 8.2e-93 344.7 297 57.2
FAN26G1347 Fragaria x ananassa HOM05D007079 ORTHO05D009006 1.2e-91 340.9 290 59.3
Cpa.g.sc2827.1 Carica papaya HOM05D007079 ORTHO05D009006 1.6e-91 340.5 246 68.7
PSO675G2324 Papaver somniferum HOM05D007079 ORTHO05D009006 2.0e-91 340.1 302 57.6
SalBow1G2109 Salvia bowleyana HOM05D007079 ORTHO05D009006 5.9e-91 338.6 315 53.3
FAN15G1571 Fragaria x ananassa HOM05D007079 ORTHO05D009006 1.3e-90 337.4 270 61.9
CARHR020210 Cardamine hirsuta HOM05D007079 ORTHO05D009006 6.5e-90 335.1 278 59.7
Peaxi162Scf00535g00126 Petunia axillaris HOM05D007079 ORTHO05D009006 1.5e-89 334.0 305 55.1
ATR1158G010 Amborella trichopoda HOM05D007079 ORTHO05D009006 6.1e-88 328.6 301 55.1
Nitab4.5_0002108g0010 Nicotiana tabacum HOM05D002466 ORTHO05D002668 2.8e-85 319.7 334 50.3
arahy.Tifrunner.gnm1.ann1.GTY6RX Arachis hypogaea HOM05D007079 ORTHO05D009006 3.1e-84 316.2 237 67.1
Nitab4.5_0005754g0040 Nicotiana tabacum HOM05D007079 ORTHO05D009006 1.5e-81 307.4 340 46.8
EL10Ac1g00614 Beta vulgaris HOM05D007079 ORTHO05D009006 2.5e-81 306.6 411 43.8
Zm00001eb128420 Zea mays HOM05D007079 ORTHO05D009006 6.1e-80 302.0 300 52.0
arahy.Tifrunner.gnm1.ann1.6FY89R Arachis hypogaea HOM05D000259 ORTHO05D000155 4.7e-72 275.8 308 51.6
CDE05G2112 Ceratophyllum demersum HOM05D007079 ORTHO05D009006 4.7e-72 275.8 302 48.0
Hma1.2p1_0469F.1_g158920 Hydrangea macrophylla HOM05D007079 ORTHO05D009006 5.6e-65 252.3 190 66.3
DCAR_026263 Daucus carota HOM05D007079 ORTHO05D009006 1.3e-58 231.1 218 54.1
Mapoly0043s0142 Marchantia polymorpha HOM05D007079 ORTHO05D009006 2.5e-57 226.9 312 42.6
Cpa.g.sc140.8 Carica papaya HOM05D007079 ORTHO05D009006 2.8e-56 223.4 277 47.7
Pp3c24_15610 Physcomitrium patens HOM05D007079 ORTHO05D009006 5.8e-54 215.7 321 39.3
AagrBONN_evm.TU.Sc2ySwM_344.2117 Anthoceros agrestis HOM05D007079 ORTHO05D009006 9.8e-54 214.9 298 42.3
SMO266G0019 Selaginella moellendorffii HOM05D007079 ORTHO05D009006 1.3e-50 204.5 299 41.1
AUR62034519 Chenopodium quinoa HOM05D007079 ORTHO05D009006 5.1e-50 202.6 167 61.7
Cre14.g628500 Chlamydomonas reinhardtii HOM05D007079 ORTHO05D009006 6.4e-45 185.7 349 36.7
CBR_g1049 Chara braunii HOM05D007079 ORTHO05D009006 4.1e-44 183.0 399 32.1
Actinidia22515 Actinidia chinensis HOM05D007079 ORTHO05D009006 1.3e-34 151.4 183 43.7
MCO16G171 Micromonas commoda HOM05D007079 ORTHO05D009006 2.0e-30 137.5 229 38.4
FAN20G1265 Fragaria x ananassa HOM05D007079 ORTHO05D009006 1.8e-26 124.4 135 47.4
PRCOL_00000559 Prasinoderma coloniale HOM05D007079 ORTHO05D009006 3.0e-26 123.6 261 33.3
SEGI_24775 Sequoiadendron giganteum HOM05D007079 ORTHO05D009006 3.3e-25 120.2 106 54.7
Os01g0261500 Oryza sativa ssp. japonica HOM05D007079 ORTHO05D009006 2.4e-23 114.0 106 50.9
CSS0043977 Camellia sinensis var. sinensis HOM05D007079 ORTHO05D043334 1.8e-18 97.8 105 46.7
SEGI_21203 Sequoiadendron giganteum HOM05D007079 ORTHO05D009006 1.9e-17 94.4 120 43.3
COL.COLO4_19820 Corchorus olitorius HOM05D001041 ORTHO05D000846 3.7e-08 63.5 51 64.7
CSS0014268 Camellia sinensis var. sinensis HOM05D007079 ORTHO05D043334 2.6e-06 57.4 141 29.1


User provided reference genes

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