Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G153100 Carya illinoinensis HOM05D007073 ORTHO05D008855 5.4e-57 224.2 118 100.0
QL02p010904 Quercus lobata HOM05D007073 ORTHO05D008855 8.9e-36 153.7 89 87.6
Dinv31819 Davidia involucrata HOM05D007073 ORTHO05D008855 7.6e-35 150.6 115 72.2
Haze_22602 Corylus avellana HOM05D000624 ORTHO05D000495 1.7e-34 149.4 89 84.3
Cfa013916 Carpinus fangiana HOM05D007073 ORTHO05D008855 3.8e-34 148.3 89 84.3
Atru.chr13.338 Acer truncatum HOM05D007073 ORTHO05D008855 1.4e-33 146.4 89 80.9
TAR628G0116 Trochodendron aralioides HOM05D007073 ORTHO05D008855 1.9e-33 146.0 87 83.9
GSVIVG01009840001 Vitis vinifera HOM05D007073 ORTHO05D008855 2.4e-33 145.6 89 80.9
Prupe.1G369500 Prunus persica HOM05D007073 ORTHO05D008855 3.2e-33 145.2 89 82.0
CSS0049768 Camellia sinensis var. sinensis HOM05D007073 ORTHO05D008855 1.6e-32 142.9 100 80.0
FAN18G2174 Fragaria x ananassa HOM05D007403 ORTHO05D009306 1.3e-31 139.8 116 65.5
Glyma.08G113800 Glycine max HOM05D007073 ORTHO05D008855 2.3e-31 139.0 89 79.8
Hma1.2p1_0773F.1_g216240 Hydrangea macrophylla HOM05D007073 ORTHO05D008855 2.3e-31 139.0 87 80.5
CANSAT25G0010 Cannabis sativa HOM05D007073 ORTHO05D008855 5.1e-31 137.9 84 79.8
RcHm_v2.0_Chr6g0272121 Rosa chinensis HOM05D007073 ORTHO05D008855 5.1e-31 137.9 100 74.0
Ciclev10002853m.g Citrus clementina HOM05D007073 ORTHO05D008855 6.6e-31 137.5 89 75.3
COL.COLO4_26179 Corchorus olitorius HOM05D007073 ORTHO05D008855 1.1e-30 136.7 89 77.5
AUR62019145 Chenopodium quinoa HOM05D007073 ORTHO05D008855 1.9e-30 136.0 84 82.1
FvH4_5g30190 Fragaria vesca HOM05D007073 ORTHO05D008855 2.5e-30 135.6 89 76.4
FAN13G2867 Fragaria x ananassa HOM05D007073 ORTHO05D008855 2.5e-30 135.6 89 76.4
RcHm_v2.0_Chr6g0302381 Rosa chinensis HOM05D007073 ORTHO05D008855 4.3e-30 134.8 89 76.4
TWI56G0686 Tripterygium wilfordii HOM05D007073 ORTHO05D008855 4.3e-30 134.8 89 73.0
AUR62014408 Chenopodium quinoa HOM05D007073 ORTHO05D008855 5.6e-30 134.4 84 81.0
Thecc.08G038900 Theobroma cacao HOM05D007073 ORTHO05D008855 7.3e-30 134.0 89 76.4
Eucgr.L01253 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.2e-29 133.3 89 76.4
EL10Ac1g00450 Beta vulgaris HOM05D007073 ORTHO05D008855 1.6e-29 132.9 84 81.0
Duzib093G1738 Durio zibethinus HOM05D007073 ORTHO05D008855 1.6e-29 132.9 89 71.9
Eucgr.H01040 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.6e-29 132.9 89 75.3
Sabra05G0182000 Salix brachista HOM05D007073 ORTHO05D008855 1.6e-29 132.9 89 73.0
Cc04_g14740 Coffea canephora HOM05D007073 ORTHO05D008855 2.1e-29 132.5 83 81.9
Potri.005G235800 Populus trichocarpa HOM05D007073 ORTHO05D008855 2.1e-29 132.5 89 73.0
Glyma.05G155900 Glycine max HOM05D007073 ORTHO05D008855 2.8e-29 132.1 89 76.4
Nn5g29254 Nelumbo nucifera HOM05D007073 ORTHO05D008855 2.8e-29 132.1 89 75.3
Lj4g0003370 Lotus japonicus HOM05D007073 ORTHO05D008855 3.6e-29 131.7 83 80.7
Gohir.A01G112900 Gossypium hirsutum HOM05D007073 ORTHO05D008855 4.7e-29 131.3 89 74.2
Manes.18G016450 Manihot esculenta HOM05D007073 ORTHO05D008855 8.1e-29 130.6 87 75.9
PGR031G0624 Punica granatum HOM05D007073 ORTHO05D008855 8.1e-29 130.6 87 74.7
HanXRQChr02g0044001 Helianthus annuus HOM05D007073 ORTHO05D008855 1.1e-28 130.2 83 78.3
Rhsim06G0025500 Rhododendron simsii HOM05D000624 ORTHO05D000495 1.1e-28 130.2 89 77.5
RhsimUnG0148500 Rhododendron simsii HOM05D007073 ORTHO05D008855 1.1e-28 130.2 89 77.5
VMungo0251G2135 Vigna mungo HOM05D007073 ORTHO05D008855 1.1e-28 130.2 87 75.9
CDE08G0828 Ceratophyllum demersum HOM05D007073 ORTHO05D008855 2.4e-28 129.0 89 76.4
vmacro21707 Vaccinium macrocarpon HOM05D007073 ORTHO05D008855 2.4e-28 129.0 89 75.3
CANSAT11G0546 Cannabis sativa HOM05D007073 ORTHO05D008855 3.1e-28 128.6 86 74.4
Gohir.D01G101000 Gossypium hirsutum HOM05D007073 ORTHO05D008855 3.1e-28 128.6 89 71.9
Oeu054729.1 Olea europaea HOM05D007073 ORTHO05D008855 3.1e-28 128.6 86 76.7
PGSC0003DMG400003718 Solanum tuberosum HOM05D007073 ORTHO05D008855 4.0e-28 128.3 83 78.3
Cc02_g29940 Coffea canephora HOM05D007073 ORTHO05D008855 5.2e-28 127.9 83 78.3
Solyc04g081160.3 Solanum lycopersicum HOM05D007073 ORTHO05D008855 6.9e-28 127.5 83 78.3
Sopen04g034780 Solanum pennellii HOM05D007073 ORTHO05D008855 6.9e-28 127.5 83 78.3
MELO3C010995.2 Cucumis melo HOM05D007073 ORTHO05D008855 8.9e-28 127.1 94 72.3
Migut.C00802 Erythranthe guttata HOM05D007073 ORTHO05D008855 8.9e-28 127.1 86 73.3
ClCG08G014440 Citrullus lanatus HOM05D007073 ORTHO05D008855 1.2e-27 126.7 90 73.3
unitig_32.g11146 Utricularia gibba HOM05D007073 ORTHO05D008855 2.0e-27 125.9 86 75.6
Aqoxy6G02335_Aqoxy6G02336 Aquilegia oxysepala HOM05D000558 ORTHO05D001857 3.4e-27 125.2 88 77.3
Phvul.002G236200 Phaseolus vulgaris HOM05D007073 ORTHO05D008855 3.4e-27 125.2 87 74.7
Lsat_1_v5_gn_1_16141 Lactuca sativa HOM05D007073 ORTHO05D008855 4.4e-27 124.8 85 74.1
Nitab4.5_0005185g0010 Nicotiana tabacum HOM05D007073 ORTHO05D008855 4.4e-27 124.8 89 70.8
Peaxi162Scf00287g01620 Petunia axillaris HOM05D007073 ORTHO05D008855 4.4e-27 124.8 83 73.5
Peaxi162Scf01591g00005 Petunia axillaris HOM05D007073 ORTHO05D008855 4.4e-27 124.8 83 73.5
Sed0011824 Sechium edule HOM05D007073 ORTHO05D008855 5.8e-27 124.4 89 74.2
SGA_v2.0_scaffold92G28274 Striga asiatica HOM05D007073 ORTHO05D008855 5.8e-27 124.4 100 69.0
HPP92_025607 Vanilla planifolia HOM05D007073 ORTHO05D008855 5.8e-27 124.4 113 61.1
CAN.G1271.5 Capsicum annuum HOM05D007073 ORTHO05D008855 7.6e-27 124.0 83 77.1
Ca_17949_v3 Cicer arietinum L. HOM05D007073 ORTHO05D008855 9.9e-27 123.6 83 73.5
TPR.G24371 Trifolium pratense HOM05D007073 ORTHO05D008855 9.9e-27 123.6 83 75.9
CsaV3_2G029360 Cucumis sativus L. HOM05D007073 ORTHO05D008855 1.7e-26 122.9 89 73.0
ECA247G1834 Erigeron canadensis HOM05D007073 ORTHO05D008855 1.7e-26 122.9 79 78.5
Os03g0127000 Oryza sativa ssp. japonica HOM05D007073 ORTHO05D008855 2.2e-26 122.5 79 77.2
Psat7g072280 Pisum sativum HOM05D007073 ORTHO05D008855 2.9e-26 122.1 82 74.4
Thhalv10009135m.g Eutrema salsugineum HOM05D007073 ORTHO05D008855 3.8e-26 121.7 85 70.6
CANSAT11G2499 Cannabis sativa HOM05D007073 ORTHO05D008855 4.9e-26 121.3 82 73.2
Lalb_Chr12g0205331 Lupinus albus HOM05D007073 ORTHO05D008855 6.4e-26 120.9 89 69.7
MD08G1016500 Malus domestica HOM05D007073 ORTHO05D008855 6.4e-26 120.9 82 72.0
SalBow7G2056 Salvia bowleyana HOM05D007073 ORTHO05D008855 8.4e-26 120.6 100 63.0
Sp1g26740 Schrenkiella parvula HOM05D007073 ORTHO05D008855 8.4e-26 120.6 85 69.4
PSO675G5408 Papaver somniferum HOM05D007073 ORTHO05D008855 1.1e-25 120.2 82 74.4
SGA_v2.0_scaffold92G28275 Striga asiatica HOM05D007073 ORTHO05D008855 1.1e-25 120.2 100 68.0
A09p35370 Brassica napus HOM05D007073 ORTHO05D008855 1.4e-25 119.8 85 69.4
Carub.0001s2918 Capsella rubella HOM05D007073 ORTHO05D008855 1.4e-25 119.8 85 68.2
Medtr8g085700 Medicago truncatula HOM05D007073 ORTHO05D008855 1.4e-25 119.8 84 72.6
AL1G45120 Arabidopsis lyrata HOM05D007073 ORTHO05D008855 1.9e-25 119.4 85 68.2
BcaB07g32745 Brassica carinata HOM05D007073 ORTHO05D008855 2.4e-25 119.0 85 69.4
BcaC05g27117 Brassica carinata HOM05D007073 ORTHO05D008855 2.4e-25 119.0 85 69.4
BcaC05g27119 Brassica carinata HOM05D007073 ORTHO05D008855 2.4e-25 119.0 85 69.4
C05p29960 Brassica napus HOM05D007073 ORTHO05D008855 2.4e-25 119.0 85 69.4
C05p29970 Brassica napus HOM05D007073 ORTHO05D008855 2.4e-25 119.0 85 69.4
BolC5t31732H Brassica oleracea HOM05D007073 ORTHO05D008855 2.4e-25 119.0 85 69.4
BolC5t31736H Brassica oleracea HOM05D007073 ORTHO05D008855 2.4e-25 119.0 85 69.4
CARHR030330 Cardamine hirsuta HOM05D007073 ORTHO05D008855 3.2e-25 118.6 85 67.1
PSO541G6379 Papaver somniferum HOM05D007073 ORTHO05D008855 3.2e-25 118.6 82 72.0
Aa31LG6G9870 Aethionema arabicum HOM05D007073 ORTHO05D008855 4.2e-25 118.2 85 68.2
Sc26g0003150 Simmondsia chinensis HOM05D007073 ORTHO05D008855 5.4e-25 117.9 84 72.6
Zm00001eb403590 Zea mays HOM05D007073 ORTHO05D008855 5.4e-25 117.9 79 74.7
Actinidia26593 Actinidia chinensis HOM05D007073 ORTHO05D008855 9.3e-25 117.1 83 77.1
MSTRG.1215 Avicennia marina HOM05D007073 ORTHO05D008855 1.6e-24 116.3 86 68.6
arahy.Tifrunner.gnm1.ann1.0LW32C Arachis hypogaea HOM05D007073 ORTHO05D008855 2.1e-24 115.9 83 73.5
MD15G1015600 Malus domestica HOM05D007073 ORTHO05D008855 3.5e-24 115.2 87 64.4
Zm00001eb001980 Zea mays HOM05D007073 ORTHO05D008855 3.5e-24 115.2 79 74.7
THA.LOC104810648 Tarenaya hassleriana HOM05D007073 ORTHO05D008855 4.6e-24 114.8 82 70.7
AT1G30845 Arabidopsis thaliana HOM05D007073 ORTHO05D008855 7.8e-24 114.0 85 65.9
arahy.Tifrunner.gnm1.ann1.F1G2D9 Arachis hypogaea HOM05D007073 ORTHO05D008855 3.3e-22 108.6 106 58.5
ATR0945G003 Amborella trichopoda HOM05D007073 ORTHO05D008855 5.6e-22 107.8 94 63.8
Actinidia37317 Actinidia chinensis HOM05D007073 ORTHO05D008855 2.6e-19 99.0 62 77.4
FAN04G0335 Fragaria x ananassa HOM05D007403 ORTHO05D009306 9.3e-17 90.5 52 84.6
SEGI_10735 Sequoiadendron giganteum HOM05D007073 ORTHO05D008855 4.6e-16 88.2 92 55.4
arahy.Tifrunner.gnm1.ann1.JR36LC Arachis hypogaea HOM05D007073 ORTHO05D008855 6.0e-16 87.8 60 75.0
Eucgr.L01259 Eucalyptus grandis HOM05D007073 ORTHO05D008855 6.7e-15 84.3 52 76.9
Eucgr.H01037 Eucalyptus grandis HOM05D007073 ORTHO05D008855 3.3e-14 82.0 60 68.3
Actinidia04603 Actinidia chinensis HOM05D007073 ORTHO05D008855 9.6e-14 80.5 59 72.9
C05p30020 Brassica napus HOM05D007073 ORTHO05D008855 8.1e-13 77.4 61 59.0
Mapoly0121s0038 Marchantia polymorpha HOM05D007073 ORTHO05D008855 4.0e-12 75.1 87 49.4
MD13G1087600 Malus domestica HOM05D007073 ORTHO05D008855 5.8e-11 71.2 42 81.0
BolC5t31739H Brassica oleracea HOM05D007073 ORTHO05D008855 3.8e-10 68.6 42 76.2
Pp3c8_14860 Physcomitrium patens HOM05D007073 ORTHO05D008855 1.4e-09 66.6 89 52.8
DCAR_017499 Daucus carota HOM05D007073 ORTHO05D008855 9.3e-09 63.9 36 91.7


User provided reference genes

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