Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G150900 Carya illinoinensis HOM05D007355 ORTHO05D009343 2.6e-62 241.9 123 100.0
QL02p011487 Quercus lobata HOM05D007355 ORTHO05D009343 2.7e-35 152.1 127 68.5
Thecc.08G043500 Theobroma cacao HOM05D007355 ORTHO05D009343 1.7e-29 132.9 137 56.2
Gorai.009G194900 Gossypium raimondii HOM05D007355 ORTHO05D009343 3.0e-26 122.1 129 55.8
CiPaw.08G065900 Carya illinoinensis HOM05D007355 ORTHO05D009343 3.9e-26 121.7 117 64.1
Gohir.D05G189650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 3.9e-26 121.7 129 55.8
COL.COLO4_26156 Corchorus olitorius HOM05D007355 ORTHO05D009343 2.5e-25 119.0 115 63.5
Potri.005G238400 Populus trichocarpa HOM05D007355 ORTHO05D009343 7.4e-25 117.5 111 60.4
Sabra05G0184200 Salix brachista HOM05D007355 ORTHO05D009343 1.6e-24 116.3 111 60.4
Gohir.A05G186732 Gossypium hirsutum HOM05D007355 ORTHO05D009343 2.2e-24 115.9 129 54.3
Dinv39511 Davidia involucrata HOM05D007355 ORTHO05D009343 2.8e-24 115.5 113 60.2
Manes.05G148200 Manihot esculenta HOM05D007355 ORTHO05D009343 4.1e-23 111.7 118 55.1
FAN20G0162 Fragaria x ananassa HOM05D007355 ORTHO05D009343 5.3e-23 111.3 110 54.5
Duzib093G0416 Durio zibethinus HOM05D007355 ORTHO05D009343 1.2e-22 110.2 73 78.1
TAR625G0791 Trochodendron aralioides HOM05D007355 ORTHO05D009343 1.2e-22 110.2 111 58.6
Haze_22626 Corylus avellana HOM05D007355 ORTHO05D009343 2.6e-22 109.0 73 79.5
FAN15G2202 Fragaria x ananassa HOM05D007355 ORTHO05D009343 5.9e-22 107.8 113 54.0
FAN27G0012 Fragaria x ananassa HOM05D007355 ORTHO05D009343 5.9e-22 107.8 113 54.0
Manes.18G014200 Manihot esculenta HOM05D007355 ORTHO05D009343 5.9e-22 107.8 115 58.3
Actinidia37930 Actinidia chinensis HOM05D007355 ORTHO05D009343 7.6e-22 107.5 106 59.4
Gohir.A06G004700 Gossypium hirsutum HOM05D007355 ORTHO05D009343 7.6e-22 107.5 101 60.4
PGR083G2600 Punica granatum HOM05D007355 ORTHO05D009343 1.3e-21 106.7 109 57.8
Ciclev10003277m.g Citrus clementina HOM05D007355 ORTHO05D009343 1.7e-21 106.3 74 77.0
Gohir.D06G000500 Gossypium hirsutum HOM05D007355 ORTHO05D009343 2.9e-21 105.5 101 59.4
Gorai.010G004900 Gossypium raimondii HOM05D007355 ORTHO05D009343 2.9e-21 105.5 101 59.4
Cpa.g.sc26.34 Carica papaya HOM05D007355 ORTHO05D009343 4.2e-20 101.7 125 50.4
Cfa013942 Carpinus fangiana HOM05D007355 ORTHO05D009343 9.3e-20 100.5 74 75.7
Prupe.1G366200 Prunus persica HOM05D007355 ORTHO05D009343 6.1e-19 97.8 83 66.3
VMungo1309G0669 Vigna mungo HOM05D007355 ORTHO05D009343 6.1e-19 97.8 105 59.0
PGSC0003DMG400009860 Solanum tuberosum HOM05D007355 ORTHO05D009343 7.9e-19 97.4 119 49.6
Glyma.06G024800 Glycine max HOM05D007355 ORTHO05D009343 1.8e-18 96.3 111 53.2
Lalb_Chr14g0369841 Lupinus albus HOM05D007355 ORTHO05D009343 1.8e-18 96.3 137 45.3
Solyc04g081380.1 Solanum lycopersicum HOM05D007355 ORTHO05D009343 2.3e-18 95.9 119 51.3
Gohir.A05G257150 Gossypium hirsutum HOM05D007355 ORTHO05D009343 3.0e-18 95.5 75 72.0
Gorai.009G270200 Gossypium raimondii HOM05D007355 ORTHO05D009343 3.0e-18 95.5 75 72.0
Hma1.2p1_0638F.1_g193820 Hydrangea macrophylla HOM05D007355 ORTHO05D009343 3.0e-18 95.5 108 53.7
Lj5g0016063 Lotus japonicus HOM05D007355 ORTHO05D009343 3.0e-18 95.5 125 48.0
MD15G1013100 Malus domestica HOM05D007355 ORTHO05D009343 1.1e-17 93.6 79 64.6
Nn1g05885 Nelumbo nucifera HOM05D007355 ORTHO05D009343 1.1e-17 93.6 123 50.4
Gohir.D05G258650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.5e-17 93.2 75 70.7
ClCG05G018320 Citrullus lanatus HOM05D007355 ORTHO05D009343 1.9e-17 92.8 81 60.5
Phvul.009G016500 Phaseolus vulgaris HOM05D007355 ORTHO05D009343 2.5e-17 92.4 105 54.3
arahy.Tifrunner.gnm1.ann1.PADY8Y Arachis hypogaea HOM05D007355 ORTHO05D009343 3.3e-17 92.0 81 61.7
Lj1g0016145 Lotus japonicus HOM05D007355 ORTHO05D009343 3.3e-17 92.0 103 55.3
Sed0024841 Sechium edule HOM05D007355 ORTHO05D009343 3.3e-17 92.0 100 50.0
arahy.Tifrunner.gnm1.ann1.Y2NNQI Arachis hypogaea HOM05D007355 ORTHO05D009343 4.3e-17 91.7 81 60.5
CsaV3_3G045820 Cucumis sativus L. HOM05D007355 ORTHO05D009343 4.3e-17 91.7 81 60.5
Glyma.04G024700 Glycine max HOM05D007355 ORTHO05D009343 4.3e-17 91.7 113 51.3
Peaxi162Scf00400g00042 Petunia axillaris HOM05D007355 ORTHO05D009343 7.4e-17 90.9 115 52.2
Sed0019478 Sechium edule HOM05D007355 ORTHO05D009343 9.7e-17 90.5 81 59.3
ClCG08G014360 Citrullus lanatus HOM05D007355 ORTHO05D009343 1.7e-16 89.7 87 54.0
CsaV3_2G029470 Cucumis sativus L. HOM05D007355 ORTHO05D009343 2.2e-16 89.4 81 56.8
MBI05_g15356_MAGBIO Magnolia biondii HOM05D007355 ORTHO05D009343 2.2e-16 89.4 109 52.3
MELO3C011006.2 Cucumis melo HOM05D007355 ORTHO05D009343 6.3e-16 87.8 86 57.0
Ca_13424_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 1.1e-15 87.0 72 63.9
Ca_13425_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 1.1e-15 87.0 72 63.9
SalBow7G4291 Salvia bowleyana HOM05D007355 ORTHO05D009343 5.3e-15 84.7 75 62.7
TPR.G26402 Trifolium pratense HOM05D007355 ORTHO05D009343 5.3e-15 84.7 77 59.7
Ah.11g039070 Amaranthus hybridus HOM05D007355 ORTHO05D009343 2.0e-14 82.8 77 55.8
DCAR_013865 Daucus carota HOM05D007355 ORTHO05D009343 2.0e-14 82.8 110 45.5
Atru.chr13.303 Acer truncatum HOM05D007355 ORTHO05D009343 3.4e-14 82.0 65 66.2
DCAR_017465 Daucus carota HOM05D007355 ORTHO05D009343 1.0e-13 80.5 116 47.4
Sc15g0005040 Simmondsia chinensis HOM05D007355 ORTHO05D009343 1.3e-13 80.1 79 55.7
Nn5g30158 Nelumbo nucifera HOM05D007355 ORTHO05D009343 1.7e-13 79.7 114 52.6
CSS0013130 Camellia sinensis var. sinensis HOM05D007355 ORTHO05D009343 2.9e-13 79.0 77 61.0
Migut.C00824 Erythranthe guttata HOM05D007355 ORTHO05D009343 2.9e-13 79.0 81 56.8
A08p29560 Brassica napus HOM05D007355 ORTHO05D009343 5.0e-13 78.2 80 56.2
C08p19840 Brassica napus HOM05D007355 ORTHO05D009343 5.0e-13 78.2 80 56.2
BolC8t49623H Brassica oleracea HOM05D007355 ORTHO05D009343 5.0e-13 78.2 80 56.2
BraA08t34894Z Brassica rapa HOM05D007355 ORTHO05D009343 5.0e-13 78.2 80 56.2
Sp1g17750 Schrenkiella parvula HOM05D007355 ORTHO05D009343 5.0e-13 78.2 80 57.5
BcaC07g39013 Brassica carinata HOM05D007355 ORTHO05D009343 6.5e-13 77.8 80 56.2
Aqoxy5G01778 Aquilegia oxysepala HOM05D007355 ORTHO05D009343 8.5e-13 77.4 112 50.0
Eucgr.F01645 Eucalyptus grandis HOM05D007355 ORTHO05D009343 8.5e-13 77.4 75 62.7
BcaB03g14421 Brassica carinata HOM05D007355 ORTHO05D009343 1.1e-12 77.0 81 51.9
THA.LOC104814032 Tarenaya hassleriana HOM05D007355 ORTHO05D009343 1.1e-12 77.0 80 56.2
Lalb_Chr22g0354351 Lupinus albus HOM05D007355 ORTHO05D009343 1.4e-12 76.6 75 57.3
Medtr1g025150 Medicago truncatula HOM05D007355 ORTHO05D009343 1.4e-12 76.6 71 56.3
Rhsim07G0246800 Rhododendron simsii HOM05D007355 ORTHO05D009343 2.5e-12 75.9 74 56.8
Thhalv10009918m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 4.2e-12 75.1 78 55.1
Lsat_1_v5_gn_2_9841 Lactuca sativa HOM05D007355 ORTHO05D009343 4.2e-12 75.1 112 45.5
CARHR020450 Cardamine hirsuta HOM05D007355 ORTHO05D009343 5.5e-12 74.7 80 55.0
Carub.0001s1949 Capsella rubella HOM05D007355 ORTHO05D009343 7.2e-12 74.3 77 55.8
Aa31LG4G5940 Aethionema arabicum HOM05D007355 ORTHO05D009343 1.2e-11 73.6 74 58.1
AL1G32690 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 1.2e-11 73.6 74 55.4
BcaB02g07039 Brassica carinata HOM05D007355 ORTHO05D009343 1.6e-11 73.2 76 60.5
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 1.6e-11 73.2 78 56.4
BcaC08g47049 Brassica carinata HOM05D007355 ORTHO05D009343 2.7e-11 72.4 75 60.0
BcaB03g14350 Brassica carinata HOM05D007355 ORTHO05D009343 6.1e-11 71.2 73 49.3
C06p49660 Brassica napus HOM05D007355 ORTHO05D009343 1.0e-10 70.5 76 60.5
BolC6t40005H Brassica oleracea HOM05D007355 ORTHO05D009343 1.0e-10 70.5 76 60.5
BcaC08g45561 Brassica carinata HOM05D007355 ORTHO05D009343 1.8e-10 69.7 75 56.0
Thhalv10019842m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 3.0e-10 68.9 75 58.7
A07p41240 Brassica napus HOM05D007355 ORTHO05D009343 3.9e-10 68.6 75 57.3
BraA07t31659Z Brassica rapa HOM05D007355 ORTHO05D009343 3.9e-10 68.6 75 57.3
C06p32480 Brassica napus HOM05D007355 ORTHO05D009343 2.0e-09 66.2 75 54.7
BolC6t38371H Brassica oleracea HOM05D007355 ORTHO05D009343 2.0e-09 66.2 75 54.7
AL2G35700 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 4.4e-09 65.1 79 57.0
CAN.G311.23 Capsicum annuum HOM05D007355 ORTHO05D009343 1.3e-08 63.5 51 62.7
BcaB03g12886 Brassica carinata HOM05D007355 ORTHO05D009343 1.7e-08 63.2 79 48.1
AT1G75717 Arabidopsis thaliana HOM05D007355 ORTHO05D009343 2.8e-08 62.4 75 54.7
CARHR069120 Cardamine hirsuta HOM05D007355 ORTHO05D009343 8.2e-08 60.8 77 54.5
Carub.0002s2256 Capsella rubella HOM05D007355 ORTHO05D009343 3.1e-07 58.9 75 52.0


User provided reference genes

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