Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G150400 Carya illinoinensis HOM05D007378 ORTHO05D007577 0.0e+00 1297.7 666 100.0
Haze_22630 Corylus avellana HOM05D007378 ORTHO05D007577 5.1e-213 745.0 666 65.6
Cfa013945 Carpinus fangiana HOM05D007378 ORTHO05D007577 1.6e-211 740.0 657 65.8
QL02p011519 Quercus lobata HOM05D007378 ORTHO05D007577 5.0e-208 728.4 692 63.2
CiPaw.08G066200 Carya illinoinensis HOM05D007378 ORTHO05D007577 9.1e-186 654.4 657 59.1
Prupe.1G365800 Prunus persica HOM05D007378 ORTHO05D007577 2.7e-137 493.4 691 46.3
Thecc.08G043900 Theobroma cacao HOM05D007378 ORTHO05D007577 4.3e-135 486.1 714 46.5
Dinv31841 Davidia involucrata HOM05D007378 ORTHO05D007577 1.2e-134 484.6 673 47.7
TWI12G0183 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 3.2e-130 469.9 686 45.8
Duzib093G0923 Durio zibethinus HOM05D007378 ORTHO05D007577 1.9e-127 460.7 728 44.5
GSVIVG01009901001 Vitis vinifera HOM05D007378 ORTHO05D007577 1.1e-125 454.9 634 47.0
Duzib116G0067 Durio zibethinus HOM05D007378 ORTHO05D007577 9.3e-122 441.8 705 44.4
TWI56G0017 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 1.6e-121 441.0 680 45.0
COL.COLO4_26152 Corchorus olitorius HOM05D007378 ORTHO05D007577 2.1e-118 430.6 716 43.6
MD15G1012700 Malus domestica HOM05D007378 ORTHO05D007577 1.8e-117 427.6 693 44.4
MD08G1013300 Malus domestica HOM05D007378 ORTHO05D007577 2.0e-116 424.1 694 43.8
Potri.005G238800 Populus trichocarpa HOM05D007378 ORTHO05D007577 6.4e-115 419.1 711 44.2
Ciclev10000382m.g Citrus clementina HOM05D007378 ORTHO05D007577 1.8e-112 411.0 694 45.4
TWI36G1616 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 6.7e-112 409.1 687 42.8
Dinv39514 Davidia involucrata HOM05D007378 ORTHO05D007577 9.0e-109 398.7 600 45.5
Manes.05G147800 Manihot esculenta HOM05D007378 ORTHO05D007577 5.5e-106 389.4 619 43.8
Potri.002G022800 Populus trichocarpa HOM05D007378 ORTHO05D007577 1.8e-104 384.4 714 42.7
Manes.18G013740 Manihot esculenta HOM05D007378 ORTHO05D007577 4.3e-103 379.8 678 42.3
Cpa.g.sc26.38 Carica papaya HOM05D007378 ORTHO05D007577 6.2e-102 375.9 644 41.9
RcHm_v2.0_Chr6g0302801 Rosa chinensis HOM05D007378 ORTHO05D007577 2.2e-99 367.5 695 39.1
FAN20G0665 Fragaria x ananassa HOM05D007378 ORTHO05D007577 5.5e-98 362.8 684 38.9
FvH4_2g38520 Fragaria vesca HOM05D007378 ORTHO05D007577 1.2e-97 361.7 687 39.2
CSS0021578 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 8.7e-96 355.5 722 39.2
Sabra02G0018600 Salix brachista HOM05D007378 ORTHO05D007577 1.6e-94 351.3 671 42.9
Atru.chr13.296 Acer truncatum HOM05D007378 ORTHO05D007577 8.2e-94 349.0 569 45.7
FAN15G3724 Fragaria x ananassa HOM05D007378 ORTHO05D007577 1.7e-91 341.3 729 36.5
FAN27G0575 Fragaria x ananassa HOM05D007378 ORTHO05D007577 1.4e-90 338.2 697 37.6
TAR381G0696 Trochodendron aralioides HOM05D007378 ORTHO05D007577 1.8e-88 331.3 583 41.0
Hma1.2p1_0023F.1_g015450 Hydrangea macrophylla HOM05D007378 ORTHO05D007577 2.5e-87 327.4 635 42.4
Sabra05G0184500 Salix brachista HOM05D007378 ORTHO05D007577 4.3e-87 326.6 723 39.1
Actinidia16984 Actinidia chinensis HOM05D007378 ORTHO05D007577 4.5e-84 316.6 675 37.9
Phvul.001G006800 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 2.2e-83 314.3 690 38.1
VMungo0647G1459 Vigna mungo HOM05D007378 ORTHO05D007577 2.2e-83 314.3 694 36.7
MBI05_g30742_MAGBIO Magnolia biondii HOM05D007378 ORTHO05D007577 1.2e-81 308.5 677 39.1
Glyma.04G024500 Glycine max HOM05D007378 ORTHO05D007577 1.6e-81 308.1 649 37.6
Glyma.17G258000 Glycine max HOM05D007378 ORTHO05D007577 3.6e-81 307.0 680 37.6
Glyma.14G219000 Glycine max HOM05D007378 ORTHO05D007577 8.8e-80 302.4 684 37.7
arahy.Tifrunner.gnm1.ann1.KUKA7T Arachis hypogaea HOM05D007378 ORTHO05D007577 7.4e-79 299.3 687 37.6
arahy.Tifrunner.gnm1.ann1.WP2VUZ Arachis hypogaea HOM05D007378 ORTHO05D007577 1.3e-78 298.5 690 37.4
Phvul.009G016700 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 5.9e-76 289.7 640 37.2
Glyma.06G024600 Glycine max HOM05D007378 ORTHO05D007577 1.0e-75 288.9 664 36.3
Actinidia15419 Actinidia chinensis HOM05D007378 ORTHO05D007577 1.4e-72 278.5 683 35.9
VMungo1309G2950 Vigna mungo HOM05D007378 ORTHO05D007577 1.1e-71 275.4 647 36.3
CANSAT25G3202 Cannabis sativa HOM05D007378 ORTHO05D007577 1.5e-71 275.0 686 36.4
Lalb_Chr11g0061931 Lupinus albus HOM05D007378 ORTHO05D007577 3.3e-71 273.9 617 37.9
Duzib041G0283 Durio zibethinus HOM05D007378 ORTHO05D007577 3.7e-70 270.4 381 46.5
Lj1g0027004 Lotus japonicus HOM05D007378 ORTHO05D007577 8.2e-70 269.2 625 37.3
Rhsim07G0247100 Rhododendron simsii HOM05D007378 ORTHO05D007577 1.6e-68 265.0 682 34.8
Lj5g0002996 Lotus japonicus HOM05D007378 ORTHO05D007577 2.6e-68 264.2 689 35.3
Ca_15483_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 5.9e-68 263.1 632 33.9
vmacro21724 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 3.7e-62 243.8 582 36.3
TPR.G34540 Trifolium pratense HOM05D007378 ORTHO05D007577 6.3e-62 243.0 594 35.0
Medtr3g113840 Medicago truncatula HOM05D007378 ORTHO05D007577 1.4e-61 241.9 645 33.5
Nn5g30152 Nelumbo nucifera HOM05D007378 ORTHO05D007577 1.6e-60 238.4 693 33.9
Psat5g013200 Pisum sativum HOM05D007378 ORTHO05D007577 2.0e-60 238.0 636 33.6
Ca_13427_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 2.5e-58 231.1 673 34.8
Lalb_Chr08g0246161 Lupinus albus HOM05D007378 ORTHO05D007577 1.2e-57 228.8 539 38.2
DCAR_013867 Daucus carota HOM05D007378 ORTHO05D007577 1.6e-57 228.4 646 31.4
Eucgr.F00598 Eucalyptus grandis HOM05D007378 ORTHO05D007577 8.0e-57 226.1 698 32.5
PGR031G0679 Punica granatum HOM05D007378 ORTHO05D007577 9.8e-55 219.2 687 32.9
CAN.G311.27 Capsicum annuum HOM05D007378 ORTHO05D007577 1.8e-53 214.9 614 33.6
Cc10_g01700 Coffea canephora HOM05D007378 ORTHO05D007577 2.0e-52 211.5 611 32.2
Duzib041G0240 Durio zibethinus HOM05D007378 ORTHO05D007577 7.7e-52 209.5 313 47.3
Hund05208 Selenicereus undatus HOM05D007378 ORTHO05D007577 1.3e-51 208.8 654 31.7
PGSC0003DMG400009935 Solanum tuberosum HOM05D007378 ORTHO05D007577 2.3e-51 208.0 613 33.4
Solyc04g081420.4 Solanum lycopersicum HOM05D007378 ORTHO05D007577 2.9e-51 207.6 613 33.1
Sopen04g035030 Solanum pennellii HOM05D007378 ORTHO05D007577 6.6e-51 206.5 615 33.5
Nitab4.5_0002561g0040 Nicotiana tabacum HOM05D007378 ORTHO05D007577 2.5e-50 204.5 607 32.9
Peaxi162Scf00438g00718 Petunia axillaris HOM05D007378 ORTHO05D007577 2.8e-49 201.1 616 30.7
TPR.G26373 Trifolium pratense HOM05D007378 ORTHO05D007577 6.1e-49 199.9 662 31.1
CSS0024961 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.0e-48 199.1 301 46.2
Sc15g0005020 Simmondsia chinensis HOM05D007378 ORTHO05D007577 1.4e-48 198.7 672 30.2
Aqoxy5G01785 Aquilegia oxysepala HOM05D007378 ORTHO05D007577 3.0e-48 197.6 656 30.6
Medtr1g025180 Medicago truncatula HOM05D007378 ORTHO05D007577 1.2e-44 185.7 648 32.4
CSS0010969 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.2e-41 175.6 339 37.8
CSS0029124 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 9.8e-39 166.0 309 42.4
PSO170G0005 Papaver somniferum HOM05D007378 ORTHO05D007577 2.0e-36 158.3 686 29.9
Psat6g003040 Pisum sativum HOM05D007378 ORTHO05D007577 3.5e-36 157.5 542 31.7
MSTRG.25246 Avicennia marina HOM05D007378 ORTHO05D007577 1.3e-35 155.6 616 29.2
PSO700G0360 Papaver somniferum HOM05D007378 ORTHO05D007577 1.3e-35 155.6 689 28.9
AUR62033831 Chenopodium quinoa HOM05D007378 ORTHO05D007577 2.3e-35 154.8 683 28.1
TAR625G0788 Trochodendron aralioides HOM05D000628 ORTHO05D001121 1.6e-33 148.7 213 49.3
Oeu020868.1 Olea europaea HOM05D007378 ORTHO05D007577 4.0e-32 144.1 519 29.5
AT1G75730 Arabidopsis thaliana HOM05D010473 ORTHO05D007577 3.0e-27 127.9 628 29.1
Thhalv10018322m.g Eutrema salsugineum HOM05D010473 ORTHO05D007577 5.1e-27 127.1 635 28.5
Sp5g30850 Schrenkiella parvula HOM05D010473 ORTHO05D007577 1.1e-26 125.9 635 28.5
vmacro04350 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 1.1e-26 125.9 266 36.8
AL2G35720 Arabidopsis lyrata HOM05D010473 ORTHO05D007577 4.3e-26 124.0 634 29.2
THA.LOC104814031 Tarenaya hassleriana HOM05D010473 ORTHO05D007577 4.3e-26 124.0 595 27.9
SalBow7G4715 Salvia bowleyana HOM05D007378 ORTHO05D007577 2.1e-25 121.7 564 27.5
Carub.0002s2258 Capsella rubella HOM05D010473 ORTHO05D007577 3.1e-24 117.9 581 29.4
Lj4A25T50 Lonicera japonica HOM05D007378 ORTHO05D007577 1.2e-23 115.9 260 37.3
Aa31LG4G5960 Aethionema arabicum HOM05D010473 ORTHO05D007577 4.4e-23 114.0 655 26.9
Migut.C00828 Erythranthe guttata HOM05D007378 ORTHO05D007577 3.7e-22 110.9 562 28.1
CARHR069140 Cardamine hirsuta HOM05D010473 ORTHO05D007577 1.4e-21 109.0 626 26.5
AUR62035752 Chenopodium quinoa HOM05D007378 ORTHO05D007577 1.7e-19 102.1 536 25.9
BcaB05g24937 Brassica carinata HOM05D010473 ORTHO05D007577 1.2e-17 95.9 575 28.7
A02p20200 Brassica napus HOM05D010473 ORTHO05D007577 8.1e-17 93.2 601 25.8
CSS0034917 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.4e-16 92.4 116 50.0
C02p33740 Brassica napus HOM05D010473 ORTHO05D007577 2.4e-16 91.7 641 25.9
BraA02t07054Z Brassica rapa HOM05D010473 ORTHO05D007577 2.4e-16 91.7 604 26.8
SGA_v2.0_scaffold92G28233 Striga asiatica HOM05D007378 ORTHO05D007577 3.4e-15 87.8 399 28.1
BcaC03g15618 Brassica carinata HOM05D010473 ORTHO05D007577 1.3e-14 85.9 635 25.5
BraA07t31661Z Brassica rapa HOM05D010473 ORTHO05D007577 3.8e-14 84.3 641 26.5
BolC2t09331H Brassica oleracea HOM05D010473 ORTHO05D007577 8.4e-14 83.2 585 25.5
Atru.chr13.297 Acer truncatum HOM05D007378 ORTHO05D007577 9.2e-13 79.7 96 53.1
TAR381G0505 Trochodendron aralioides HOM05D007378 ORTHO05D007577 1.9e-10 72.0 102 49.0
A07p41260 Brassica napus HOM05D010473 ORTHO05D007577 7.3e-10 70.1 402 27.1
BolC6t40007H Brassica oleracea HOM05D010473 ORTHO05D007577 7.3e-10 70.1 518 25.1
ATR0152G004 Amborella trichopoda HOM05D007378 ORTHO05D007577 2.1e-09 68.6 243 30.0
C06p49680 Brassica napus HOM05D010473 ORTHO05D007577 4.7e-09 67.4 516 26.6
Lsat_1_v5_gn_2_9361 Lactuca sativa HOM05D037282 ORTHO05D035104 6.2e-09 67.0 102 42.2
BcaC08g47058 Brassica carinata HOM05D010473 ORTHO05D007577 2.2e-06 58.5 227 29.1
TPR.G31883 Trifolium pratense HOM05D007378 ORTHO05D007577 3.8e-06 57.8 73 46.6


User provided reference genes

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