Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G149400 Carya illinoinensis HOM05D007760 ORTHO05D008337 7.3e-142 507.3 271 100.0
CiPaw.08G066600 Carya illinoinensis HOM05D007760 ORTHO05D008337 2.0e-75 286.6 280 59.6
Cfa013954 Carpinus fangiana HOM05D007760 ORTHO05D008337 1.8e-47 193.7 279 48.4
Haze_22637 Corylus avellana HOM05D007760 ORTHO05D008337 7.3e-41 171.8 296 42.6
QL02p011665 Quercus lobata HOM05D007760 ORTHO05D008337 2.2e-29 133.7 327 37.9
Dinv39521 Davidia involucrata HOM05D007760 ORTHO05D008337 1.1e-23 114.8 160 50.6
Rhsim06G0021400 Rhododendron simsii HOM05D007760 ORTHO05D008337 6.8e-23 112.1 310 35.8
Thecc.08G044900 Theobroma cacao HOM05D007760 ORTHO05D008337 4.2e-20 102.8 313 34.5
CSS0044946 Camellia sinensis var. sinensis HOM05D007760 ORTHO05D008337 5.4e-20 102.4 189 44.4
Manes.18G013300 Manihot esculenta HOM05D007760 ORTHO05D008337 7.8e-19 98.6 308 32.8
Cpa.g.sc26.48 Carica papaya HOM05D007760 ORTHO05D008337 1.0e-18 98.2 264 33.7
Dinv31848 Davidia involucrata HOM05D007760 ORTHO05D008337 1.7e-18 97.4 163 45.4
Duzib041G0564 Durio zibethinus HOM05D007760 ORTHO05D008337 1.1e-17 94.7 207 39.6
TAR381G0719 Trochodendron aralioides HOM05D007760 ORTHO05D008337 2.5e-17 93.6 163 42.3
TAR625G0557 Trochodendron aralioides HOM05D007760 ORTHO05D008337 2.5e-17 93.6 300 32.0
Phvul.009G017200 Phaseolus vulgaris HOM05D007760 ORTHO05D008337 7.3e-17 92.0 284 33.5
Gorai.010G004000 Gossypium raimondii HOM05D007760 ORTHO05D008337 1.2e-16 91.3 284 34.2
VMungo1309G0539 Vigna mungo HOM05D007760 ORTHO05D008337 1.6e-16 90.9 279 33.0
Manes.05G147200 Manihot esculenta HOM05D007760 ORTHO05D008337 2.1e-16 90.5 306 34.0
Duzib116G0858 Durio zibethinus HOM05D007760 ORTHO05D008337 2.8e-16 90.1 316 32.0
Nitab4.5_0000192g0190 Nicotiana tabacum HOM05D021694 ORTHO05D008337 4.7e-16 89.4 265 31.7
Nitab4.5_0009651g0030 Nicotiana tabacum HOM05D007760 ORTHO05D008337 8.1e-16 88.6 230 33.5
Lalb_Chr11g0061901 Lupinus albus HOM05D007760 ORTHO05D008337 1.4e-15 87.8 264 32.6
Potri.005G239800 Populus trichocarpa HOM05D007760 ORTHO05D008337 2.4e-15 87.0 331 32.0
RhsimUnG0065900 Rhododendron simsii HOM05D007760 ORTHO05D008337 2.4e-15 87.0 302 32.1
Gohir.D06G006700 Gossypium hirsutum HOM05D007760 ORTHO05D008337 3.1e-15 86.7 284 33.5
RhsimUnG0066000 Rhododendron simsii HOM05D007760 ORTHO05D008337 1.5e-14 84.3 283 33.2
Sabra05G0185300 Salix brachista HOM05D007760 ORTHO05D008337 1.5e-14 84.3 316 32.3
Gohir.A06G003800 Gossypium hirsutum HOM05D007760 ORTHO05D008337 2.0e-14 84.0 278 33.5
Rhsim07G0247700 Rhododendron simsii HOM05D007760 ORTHO05D008337 2.6e-14 83.6 154 39.6
SGA_v2.0_scaffold11G05919 Striga asiatica HOM05D007760 ORTHO05D008337 4.4e-14 82.8 169 38.5
Glyma.04G024000 Glycine max HOM05D007760 ORTHO05D008337 5.8e-14 82.4 295 30.5
Peaxi162Scf00438g00084 Petunia axillaris HOM05D021694 ORTHO05D008337 1.3e-13 81.3 272 30.9
Atru.chr13.288 Acer truncatum HOM05D007760 ORTHO05D008337 1.7e-13 80.9 302 31.5
Actinidia15424 Actinidia chinensis HOM05D007760 ORTHO05D008337 2.2e-13 80.5 286 32.5
Nitab4.5_0025981g0010 Nicotiana tabacum HOM05D007760 ORTHO05D008337 2.9e-13 80.1 165 37.0
FAN20G0648 Fragaria x ananassa HOM05D015458 ORTHO05D008337 4.9e-13 79.3 196 32.7
Oeu027538.2 Olea europaea HOM05D007760 ORTHO05D008337 8.4e-13 78.6 157 38.2
arahy.Tifrunner.gnm1.ann1.EU98QJ Arachis hypogaea HOM05D007760 ORTHO05D008337 1.4e-12 77.8 169 36.7
arahy.Tifrunner.gnm1.ann1.WD1IN2 Arachis hypogaea HOM05D007760 ORTHO05D008337 1.4e-12 77.8 169 37.3
Medtr1g025290 Medicago truncatula HOM05D007760 ORTHO05D008337 1.4e-12 77.8 306 29.4
Glyma.06G024200 Glycine max HOM05D007760 ORTHO05D008337 1.9e-12 77.4 285 31.2
Lalb_Chr14g0369911 Lupinus albus HOM05D007760 ORTHO05D008337 1.9e-12 77.4 317 30.0
Oeu046271.1 Olea europaea HOM05D007760 ORTHO05D008337 1.9e-12 77.4 289 29.8
Potri.002G021900 Populus trichocarpa HOM05D007760 ORTHO05D008337 1.9e-12 77.4 198 37.4
FAN15G2338 Fragaria x ananassa HOM05D015458 ORTHO05D008337 4.2e-12 76.3 196 31.6
FAN27G2463 Fragaria x ananassa HOM05D015458 ORTHO05D008337 4.2e-12 76.3 196 32.1
Gohir.A06G003700 Gossypium hirsutum HOM05D007760 ORTHO05D008337 4.2e-12 76.3 296 31.1
Gorai.010G004100 Gossypium raimondii HOM05D007760 ORTHO05D008337 5.4e-12 75.9 293 32.1
TWI36G1437 Tripterygium wilfordii HOM05D007760 ORTHO05D008337 5.4e-12 75.9 297 31.0
Gohir.D06G006600 Gossypium hirsutum HOM05D007760 ORTHO05D008337 1.2e-11 74.7 296 30.7
Psat6g002760 Pisum sativum HOM05D007760 ORTHO05D008337 1.2e-11 74.7 212 31.1
PSO170G4597 Papaver somniferum HOM05D063576 ORTHO05D008337 1.6e-11 74.3 166 35.5
Gorai.010G003900 Gossypium raimondii HOM05D007760 ORTHO05D008337 2.1e-11 73.9 295 30.2
PSO700G0198 Papaver somniferum HOM05D063576 ORTHO05D008337 2.7e-11 73.6 166 34.9
Psat6g002720 Pisum sativum HOM05D007760 ORTHO05D008337 2.7e-11 73.6 207 31.9
Migut.N03163 Erythranthe guttata HOM05D007760 ORTHO05D008337 6.0e-11 72.4 166 36.7
MBI05_g33714_MAGBIO Magnolia biondii HOM05D007760 ORTHO05D008337 7.8e-11 72.0 299 31.1
FvH4_2g38410 Fragaria vesca HOM05D015458 ORTHO05D008337 1.0e-10 71.6 196 32.1
Prupe.1G364900 Prunus persica HOM05D015458 ORTHO05D008337 1.0e-10 71.6 172 35.5
Hund05187 Selenicereus undatus HOM05D030748 ORTHO05D008337 1.0e-10 71.6 166 39.2
GSVIVG01009892001 Vitis vinifera HOM05D000594 ORTHO05D002521 1.0e-10 71.6 144 37.5
MSTRG.24243 Avicennia marina HOM05D007760 ORTHO05D008337 1.3e-10 71.2 159 41.5
COL.COLO4_26143 Corchorus olitorius HOM05D007760 ORTHO05D008337 1.7e-10 70.9 282 33.0
GSVIVG01009912001 Vitis vinifera HOM05D007760 ORTHO05D008337 1.7e-10 70.9 145 38.6
MELO3C011015.2 Cucumis melo HOM05D016278 ORTHO05D008337 3.9e-10 69.7 302 28.5
Lj1g0003650 Lotus japonicus HOM05D007760 ORTHO05D008337 3.9e-10 69.7 280 28.6
RcHm_v2.0_Chr6g0302891 Rosa chinensis HOM05D015458 ORTHO05D008337 3.9e-10 69.7 200 30.0
SalBow7G2592 Salvia bowleyana HOM05D007760 ORTHO05D008337 5.1e-10 69.3 281 29.2
Eucgr.F00585 Eucalyptus grandis HOM05D007760 ORTHO05D008337 6.6e-10 68.9 174 35.1
Sopen04g035090 Solanum pennellii HOM05D021694 ORTHO05D008337 6.6e-10 68.9 86 51.2
Lalb_Chr23g0266151 Lupinus albus HOM05D007760 ORTHO05D008337 8.7e-10 68.6 285 29.1
TPR.G20837 Trifolium pratense HOM05D007760 ORTHO05D008337 8.7e-10 68.6 308 26.9
MSTRG.1190 Avicennia marina HOM05D007760 ORTHO05D008337 1.5e-09 67.8 291 32.0
TWI56G0173 Tripterygium wilfordii HOM05D007760 ORTHO05D008337 1.5e-09 67.8 281 31.7
Gohir.A06G003900 Gossypium hirsutum HOM05D007760 ORTHO05D008337 1.9e-09 67.4 290 30.0
Psat6g002840 Pisum sativum HOM05D007760 ORTHO05D008337 1.9e-09 67.4 219 30.1
Nn5g29094 Nelumbo nucifera HOM05D007760 ORTHO05D008337 2.5e-09 67.0 210 32.4
Ciclev10001832m.g Citrus clementina HOM05D007760 ORTHO05D008337 3.3e-09 66.6 160 40.0
GSVIVG01009911001 Vitis vinifera HOM05D007760 ORTHO05D008337 3.3e-09 66.6 144 36.1
Psat6g002640 Pisum sativum HOM05D007760 ORTHO05D008337 5.6e-09 65.9 160 36.2
SalBow8G4233 Salvia bowleyana HOM05D007760 ORTHO05D008337 2.8e-08 63.5 180 35.0
Solyc04g081480.3 Solanum lycopersicum HOM05D021694 ORTHO05D008337 2.8e-08 63.5 157 36.3
CsaV3_2G029560 Cucumis sativus L. HOM05D016278 ORTHO05D008337 4.8e-08 62.8 296 29.4
MD08G1012900 Malus domestica HOM05D015458 ORTHO05D008337 6.2e-08 62.4 166 33.7
Ca_13429_v3 Cicer arietinum L. HOM05D007760 ORTHO05D008337 8.1e-08 62.0 216 32.9
Migut.C00840 Erythranthe guttata HOM05D007760 ORTHO05D008337 1.4e-07 61.2 163 39.3
Ca_13430_v3 Cicer arietinum L. HOM05D007760 ORTHO05D008337 3.1e-07 60.1 261 29.1
Medtr1g025310 Medicago truncatula HOM05D007760 ORTHO05D008337 6.9e-07 58.9 162 33.3
Sc15g0004960 Simmondsia chinensis HOM05D007760 ORTHO05D008337 6.9e-07 58.9 272 27.9
ClCG08G014270 Citrullus lanatus HOM05D016278 ORTHO05D008337 1.2e-06 58.2 160 33.8
MD15G1011900 Malus domestica HOM05D015458 ORTHO05D008337 1.5e-06 57.8 81 45.7
TPR.G434 Trifolium pratense HOM05D007760 ORTHO05D008337 1.5e-06 57.8 181 26.5
Lalb_Chr24g0398711 Lupinus albus HOM05D007760 ORTHO05D008337 2.6e-06 57.0 314 25.5
Sed0012610 Sechium edule HOM05D016278 ORTHO05D008337 2.6e-06 57.0 293 25.6
Psat6g002560 Pisum sativum HOM05D007760 ORTHO05D008337 7.6e-06 55.5 162 32.1


User provided reference genes

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