Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G149200 Carya illinoinensis HOM05D006392 ORTHO05D008010 1.2e-222 776.2 374 100.0
Haze_22639 Corylus avellana HOM05D006392 ORTHO05D008010 7.4e-177 624.0 421 74.3
QL02p011683 Quercus lobata HOM05D006392 ORTHO05D008010 1.1e-167 593.6 382 74.1
Cfa013957 Carpinus fangiana HOM05D006392 ORTHO05D008010 1.8e-167 592.8 375 78.9
Prupe.1G364700 Prunus persica HOM05D006392 ORTHO05D008010 9.7e-161 570.5 383 71.0
CsaV3_3G045910 Cucumis sativus L. HOM05D006392 ORTHO05D008010 2.6e-158 562.4 379 68.9
Thecc.08G045200 Theobroma cacao HOM05D006392 ORTHO05D008010 5.9e-158 561.2 382 69.9
TWI56G0581 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 1.7e-157 559.7 381 69.6
Eucgr.F01664 Eucalyptus grandis HOM05D006392 ORTHO05D008010 3.8e-157 558.5 379 69.9
Gohir.A01G111000 Gossypium hirsutum HOM05D006392 ORTHO05D008010 6.5e-157 557.8 380 70.3
Gorai.002G123300 Gossypium raimondii HOM05D006392 ORTHO05D008010 1.2e-155 553.5 380 70.0
Gohir.D01G097700 Gossypium hirsutum HOM05D006392 ORTHO05D008010 2.7e-155 552.4 380 70.0
Cpa.g.sc26.51 Carica papaya HOM05D006392 ORTHO05D008010 4.7e-155 551.6 383 67.6
GSVIVG01009916001 Vitis vinifera HOM05D006392 ORTHO05D008010 1.8e-154 549.7 376 68.9
MD15G1011700 Malus domestica HOM05D006392 ORTHO05D008010 3.0e-154 548.9 381 68.8
Duzib093G0848 Durio zibethinus HOM05D006392 ORTHO05D008010 8.8e-154 547.4 382 68.3
CANSAT25G2040 Cannabis sativa HOM05D006392 ORTHO05D008010 2.0e-153 546.2 383 67.9
Sed0018359 Sechium edule HOM05D006392 ORTHO05D008010 2.2e-152 542.7 377 67.9
Potri.002G021700 Populus trichocarpa HOM05D006392 ORTHO05D008010 8.2e-152 540.8 380 67.4
MD08G1012700 Malus domestica HOM05D006392 ORTHO05D008010 3.1e-151 538.9 381 67.2
Potri.005G240000 Populus trichocarpa HOM05D006392 ORTHO05D008010 3.1e-151 538.9 380 66.6
Lj6g0002207 Lotus japonicus HOM05D006392 ORTHO05D008010 5.3e-151 538.1 375 69.1
Ca_00791_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 2.0e-150 536.2 373 67.8
Glyma.09G103100 Glycine max HOM05D006392 ORTHO05D008010 2.0e-150 536.2 373 69.4
Lalb_Chr20g0119891 Lupinus albus HOM05D006392 ORTHO05D008010 2.0e-150 536.2 374 68.2
Sabra05G0185500 Salix brachista HOM05D006392 ORTHO05D008010 1.7e-149 533.1 380 66.3
MSTRG.1188 Avicennia marina HOM05D006392 ORTHO05D008010 1.6e-147 526.6 373 67.8
Hma1.2p1_0638F.1_g193900 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 1.6e-147 526.6 378 66.1
Ca_07152_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 2.7e-147 525.8 376 66.8
FvH4_2g38390 Fragaria vesca HOM05D006392 ORTHO05D008010 1.8e-146 523.1 374 67.6
RcHm_v2.0_Chr6g0302911 Rosa chinensis HOM05D006392 ORTHO05D008010 1.8e-146 523.1 372 68.5
Phvul.005G022200 Phaseolus vulgaris HOM05D006392 ORTHO05D008010 4.0e-146 521.9 373 68.1
CSS0006206 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 6.7e-146 521.2 379 66.2
CSS0012189 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 6.7e-146 521.2 379 66.2
Ciclev10001496m.g Citrus clementina HOM05D006392 ORTHO05D008010 8.8e-146 520.8 378 65.6
Medtr2g029040 Medicago truncatula HOM05D006392 ORTHO05D008010 1.2e-145 520.4 378 65.3
PGR083G2660 Punica granatum HOM05D006392 ORTHO05D008010 1.2e-145 520.4 378 65.3
AL8G18870 Arabidopsis lyrata HOM05D006392 ORTHO05D008010 1.5e-145 520.0 381 63.3
Rhsim06G0021200 Rhododendron simsii HOM05D006392 ORTHO05D008010 3.3e-145 518.8 379 65.7
arahy.Tifrunner.gnm1.ann1.8AJY4P Arachis hypogaea HOM05D006392 ORTHO05D008010 3.7e-144 515.4 359 70.2
TAR628G0005 Trochodendron aralioides HOM05D006392 ORTHO05D008010 4.8e-144 515.0 380 65.3
arahy.Tifrunner.gnm1.ann1.GAE5DS Arachis hypogaea HOM05D006392 ORTHO05D008010 2.4e-143 512.7 359 69.9
THA.LOC104809190 Tarenaya hassleriana HOM05D006392 ORTHO05D008010 7.0e-143 511.1 379 64.6
A06p48320 Brassica napus HOM05D006392 ORTHO05D008010 9.1e-143 510.8 379 63.6
Manes.05G146900 Manihot esculenta HOM05D006392 ORTHO05D008010 1.2e-142 510.4 380 63.2
BraA06t27702Z Brassica rapa HOM05D006392 ORTHO05D008010 3.5e-142 508.8 379 63.3
BcaC02g10765 Brassica carinata HOM05D006392 ORTHO05D008010 2.2e-141 506.1 379 63.1
TWI36G0533 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 2.9e-141 505.8 354 67.5
Sp7g07860 Schrenkiella parvula HOM05D006392 ORTHO05D008010 3.8e-141 505.4 382 61.8
BcaC06g31757 Brassica carinata HOM05D006392 ORTHO05D008010 8.5e-141 504.2 379 62.5
Sabra02G0018100 Salix brachista HOM05D006392 ORTHO05D008010 1.9e-140 503.1 412 59.7
AT5G42470 Arabidopsis thaliana HOM05D006392 ORTHO05D008010 2.5e-140 502.7 383 62.1
VMungo1080G0965 Vigna mungo HOM05D006392 ORTHO05D008010 2.5e-140 502.7 349 69.6
Oeu014179.1 Olea europaea HOM05D006392 ORTHO05D008010 3.2e-140 502.3 376 64.9
C04p25370 Brassica napus HOM05D006392 ORTHO05D008010 5.5e-140 501.5 380 62.9
BolC4t24044H Brassica oleracea HOM05D006392 ORTHO05D008010 5.5e-140 501.5 380 62.9
Lj4C23T1 Lonicera japonica HOM05D006392 ORTHO05D008010 6.1e-139 498.0 396 61.6
Thhalv10003229m.g Eutrema salsugineum HOM05D006392 ORTHO05D008010 3.0e-138 495.7 379 61.7
Carub.0008s0658 Capsella rubella HOM05D006392 ORTHO05D008010 1.2e-137 493.8 384 61.2
ECA233G3412 Erigeron canadensis HOM05D006392 ORTHO05D008010 1.5e-137 493.4 375 62.7
HanXRQChr13g0387101 Helianthus annuus HOM05D006392 ORTHO05D008010 1.5e-137 493.4 377 62.9
CAN.G311.35 Capsicum annuum HOM05D006392 ORTHO05D008010 2.6e-137 492.7 378 63.0
Solyc04g081500.3 Solanum lycopersicum HOM05D006392 ORTHO05D008010 3.4e-137 492.3 378 63.0
Actinidia21265 Actinidia chinensis HOM05D006392 ORTHO05D008010 5.7e-137 491.5 379 63.1
Sopen04g035110 Solanum pennellii HOM05D006392 ORTHO05D008010 5.7e-137 491.5 378 63.0
PGSC0003DMG400009939 Solanum tuberosum HOM05D006392 ORTHO05D008010 5.7e-137 491.5 378 63.2
Aqoxy6G00284_Aqoxy6G00285 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 1.4e-135 486.9 371 62.5
AUR62033899 Chenopodium quinoa HOM05D006392 ORTHO05D008010 1.8e-135 486.5 374 62.3
Migut.C00843 Erythranthe guttata HOM05D006392 ORTHO05D008010 1.2e-134 483.8 369 63.4
EL10Ac1g02188 Beta vulgaris HOM05D006392 ORTHO05D008010 1.6e-134 483.4 354 63.8
PSO675G2043 Papaver somniferum HOM05D006392 ORTHO05D008010 3.5e-134 482.3 373 62.2
SalBow7G2189 Salvia bowleyana HOM05D006392 ORTHO05D008010 1.0e-133 480.7 383 61.1
PSO541G2958 Papaver somniferum HOM05D006392 ORTHO05D008010 3.8e-133 478.8 373 61.9
FAN20G2474 Fragaria x ananassa HOM05D006392 ORTHO05D008010 4.2e-132 475.3 372 62.9
FAN15G0959 Fragaria x ananassa HOM05D006392 ORTHO05D008010 5.5e-132 474.9 372 62.4
Aa31LG9G12590 Aethionema arabicum HOM05D006392 ORTHO05D008010 1.2e-131 473.8 352 62.2
Lsat_1_v5_gn_8_30701 Lactuca sativa HOM05D006392 ORTHO05D008010 2.8e-131 472.6 377 62.1
FAN27G1073 Fragaria x ananassa HOM05D006392 ORTHO05D008010 4.7e-131 471.9 372 62.4
ATR0810G120 Amborella trichopoda HOM05D006392 ORTHO05D008010 1.8e-130 469.9 376 59.6
DCAR_023015 Daucus carota HOM05D006392 ORTHO05D008010 6.8e-130 468.0 376 59.6
Duzib116G0836 Durio zibethinus HOM05D006392 ORTHO05D008010 9.8e-129 464.2 383 61.9
SGA_v2.0_scaffold11G05922 Striga asiatica HOM05D006392 ORTHO05D008010 1.6e-123 446.8 373 59.2
Os06g0715600 Oryza sativa ssp. japonica HOM05D006392 ORTHO05D008010 8.0e-123 444.5 372 55.4
Psat1g169520 Pisum sativum HOM05D006392 ORTHO05D008010 8.9e-122 441.0 324 66.0
Nitab4.5_0013390g0010 Nicotiana tabacum HOM05D006392 ORTHO05D008010 5.8e-121 438.3 378 57.4
Sc02g0008600 Simmondsia chinensis HOM05D006392 ORTHO05D008010 9.2e-119 431.0 329 63.5
Eucgr.F02661 Eucalyptus grandis HOM05D006392 ORTHO05D008010 3.5e-118 429.1 304 67.8
Hund05186 Selenicereus undatus HOM05D006392 ORTHO05D008010 6.0e-118 428.3 381 57.0
Nn1g05904 Nelumbo nucifera HOM05D006392 ORTHO05D008010 5.0e-117 425.2 379 55.4
Zm00001eb228060 Zea mays HOM05D006392 ORTHO05D008010 6.6e-117 424.9 374 54.3
AUR62041903 Chenopodium quinoa HOM05D006392 ORTHO05D008010 1.5e-116 423.7 372 56.5
CDE04G0374 Ceratophyllum demersum HOM05D006392 ORTHO05D008010 1.9e-116 423.3 374 55.3
SEGI_16132 Sequoiadendron giganteum HOM05D006392 ORTHO05D008010 9.5e-116 421.0 376 52.9
Hma1.2p1_0638F.1_g193910 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 1.5e-113 413.7 401 53.1
MD11G1014100 Malus domestica HOM05D006392 ORTHO05D008010 3.4e-113 412.5 280 71.1
Peaxi162Scf00438g00835 Petunia axillaris HOM05D006392 ORTHO05D008010 1.9e-111 406.8 378 55.3
Dinv31849 Davidia involucrata HOM05D006392 ORTHO05D008010 2.4e-111 406.4 305 64.9
MBI05_g07507_MAGBIO Magnolia biondii HOM05D006392 ORTHO05D008010 1.2e-110 404.1 356 57.6
HPP92_024091 Vanilla planifolia HOM05D006392 ORTHO05D008010 3.5e-110 402.5 382 52.9
Actinidia35835 Actinidia chinensis HOM05D006392 ORTHO05D008010 3.4e-105 386.0 372 54.0
COL.COLO4_26140 Corchorus olitorius HOM05D006392 ORTHO05D008010 1.3e-104 384.0 288 64.6
MELO3C030484.2 Cucumis melo HOM05D006392 ORTHO05D008010 1.3e-104 384.0 397 53.7
TPR.G17497 Trifolium pratense HOM05D006392 ORTHO05D008010 7.1e-103 378.3 259 70.3
vmacro07583 Vaccinium macrocarpon HOM05D006392 ORTHO05D008010 7.6e-97 358.2 280 63.6
Glyma.15G275100 Glycine max HOM05D006392 ORTHO05D008010 9.6e-92 341.3 225 72.9
unitig_32.g11136 Utricularia gibba HOM05D006392 ORTHO05D008010 1.6e-91 340.5 281 58.7
Actinidia16990 Actinidia chinensis HOM05D006392 ORTHO05D004187 8.1e-91 338.2 256 64.5
CARHR181930 Cardamine hirsuta HOM05D006392 ORTHO05D008010 1.3e-85 320.9 218 67.4
Atru.chr13.285 Acer truncatum HOM05D006392 ORTHO05D008010 5.1e-85 318.9 343 47.5
Pp3c4_9730 Physcomitrium patens HOM05D006392 ORTHO05D008010 2.8e-83 313.2 367 44.1
AagrBONN_evm.TU.Sc2ySwM_117.3435 Anthoceros agrestis HOM05D006392 ORTHO05D008010 3.6e-83 312.8 364 45.6
SMO196G0156 Selaginella moellendorffii HOM05D006392 ORTHO05D008010 4.8e-83 312.4 372 41.7
Mapoly0064s0103 Marchantia polymorpha HOM05D006392 ORTHO05D008010 1.4e-82 310.8 386 41.2
Cc10_g01630 Coffea canephora HOM05D006392 ORTHO05D008010 1.0e-69 268.1 183 67.8
CBR_g23034 Chara braunii HOM05D006392 ORTHO05D008010 9.0e-66 255.0 387 35.7
Cc10_g01620 Coffea canephora HOM05D006392 ORTHO05D008010 1.8e-58 230.7 189 57.7
Aqoxy4G01015 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 3.2e-47 193.4 164 57.3
Ah.11g039750 Amaranthus hybridus HOM05D006392 ORTHO05D008010 2.0e-44 184.1 149 60.4
RcHm_v2.0_Chr4g0398171 Rosa chinensis HOM05D006392 ORTHO05D008010 1.0e-32 145.2 109 66.1
RcHm_v2.0_Chr4g0398161 Rosa chinensis HOM05D006392 ORTHO05D008010 1.7e-32 144.4 101 75.2
TPR.G29580 Trifolium pratense HOM05D006392 ORTHO05D008010 2.2e-32 144.1 115 55.7
Actinidia27159 Actinidia chinensis HOM05D006392 ORTHO05D008010 2.6e-28 130.6 197 40.6
Zm00001eb340150 Zea mays HOM05D006392 ORTHO05D008010 9.5e-15 85.5 77 50.6
ClCG05G018230 Citrullus lanatus HOM05D006392 ORTHO05D008010 2.8e-14 84.0 46 78.3
Cre09.g401367 Chlamydomonas reinhardtii HOM05D006392 ORTHO05D008010 2.0e-12 77.8 138 35.5


User provided reference genes

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