Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G147300 Carya illinoinensis HOM05D007731 ORTHO05D008483 1.6e-119 433.0 245 100.0
CiPaw.08G067400 Carya illinoinensis HOM05D007731 ORTHO05D008483 1.2e-69 267.3 245 67.3
QL02p012129 Quercus lobata HOM05D007731 ORTHO05D008483 2.5e-64 249.6 253 62.5
Haze_22661 Corylus avellana HOM05D007731 ORTHO05D008483 5.5e-64 248.4 255 64.7
Cfa013976 Carpinus fangiana HOM05D007731 ORTHO05D008483 2.3e-62 243.0 255 63.1
Thecc.08G047100 Theobroma cacao HOM05D007731 ORTHO05D008483 7.0e-43 178.3 263 50.2
Manes.05G145300 Manihot esculenta HOM05D007731 ORTHO05D008483 5.9e-42 175.3 262 46.6
TAR376G0482 Trochodendron aralioides HOM05D007731 ORTHO05D008483 1.7e-41 173.7 248 48.4
Potri.005G241800 Populus trichocarpa HOM05D007731 ORTHO05D008483 2.3e-41 173.3 269 46.5
CSS0005102 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 3.9e-41 172.6 253 48.6
Prupe.1G363100 Prunus persica HOM05D007731 ORTHO05D008483 1.5e-40 170.6 281 47.3
Duzib093G0569 Durio zibethinus HOM05D007731 ORTHO05D008483 4.3e-40 169.1 263 47.1
Potri.002G019700 Populus trichocarpa HOM05D007731 ORTHO05D008483 7.3e-40 168.3 267 44.9
CSS0046256 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 1.6e-39 167.2 253 48.2
Manes.18G011966 Manihot esculenta HOM05D007731 ORTHO05D008483 1.6e-39 167.2 264 47.3
TAR628G0423 Trochodendron aralioides HOM05D007731 ORTHO05D008483 1.6e-39 167.2 249 44.6
Gorai.009G193400 Gossypium raimondii HOM05D007731 ORTHO05D008483 1.8e-38 163.7 261 53.6
Gohir.A05G185300 Gossypium hirsutum HOM05D007731 ORTHO05D008483 4.0e-38 162.5 262 49.6
Sabra02G0016000 Salix brachista HOM05D007731 ORTHO05D008483 4.0e-38 162.5 267 44.6
RcHm_v2.0_Chr6g0303181 Rosa chinensis HOM05D007731 ORTHO05D008483 2.0e-37 160.2 247 45.3
Hma1.2p1_0733F.1_g210180 Hydrangea macrophylla HOM05D007731 ORTHO05D008483 2.6e-37 159.8 247 47.0
Cpa.g.sc26.305 Carica papaya HOM05D007731 ORTHO05D008483 9.8e-37 157.9 235 46.4
Ciclev10002425m.g Citrus clementina HOM05D007731 ORTHO05D008483 3.7e-36 156.0 235 51.1
Dinv39536 Davidia involucrata HOM05D007731 ORTHO05D008483 6.4e-36 155.2 158 60.8
Sabra05G0187200 Salix brachista HOM05D007731 ORTHO05D008483 8.3e-36 154.8 280 42.5
Gohir.D05G188100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 2.4e-35 153.3 261 51.7
COL.COLO4_26124 Corchorus olitorius HOM05D007731 ORTHO05D008483 1.6e-34 150.6 265 49.8
FAN20G0947 Fragaria x ananassa HOM05D007731 ORTHO05D008483 1.6e-34 150.6 256 46.5
Nn6g32002 Nelumbo nucifera HOM05D007731 ORTHO05D008483 3.9e-33 146.0 167 52.7
CSS0037397 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 1.1e-32 144.4 245 44.1
FvH4_2g38210 Fragaria vesca HOM05D007731 ORTHO05D008483 4.3e-32 142.5 250 44.4
FAN27G0472 Fragaria x ananassa HOM05D007731 ORTHO05D008483 4.3e-32 142.5 256 45.7
Nn5g30769 Nelumbo nucifera HOM05D007731 ORTHO05D008483 5.6e-32 142.1 147 55.1
Lj4P799T27 Lonicera japonica HOM05D007731 ORTHO05D008483 1.6e-31 140.6 297 41.1
TWI12G0892 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 2.1e-31 140.2 230 49.1
CANSAT25G3722 Cannabis sativa HOM05D007731 ORTHO05D008483 2.3e-30 136.7 236 47.0
FAN15G0282 Fragaria x ananassa HOM05D007731 ORTHO05D008483 3.1e-30 136.3 255 44.3
Actinidia15437 Actinidia chinensis HOM05D007731 ORTHO05D008483 3.2e-27 126.3 226 45.6
Gohir.A01G110400 Gossypium hirsutum HOM05D007731 ORTHO05D008483 9.2e-27 124.8 257 43.2
CSS0031900 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 4.6e-26 122.5 246 41.9
TWI56G0526 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 4.6e-26 122.5 225 42.7
Sed0013309 Sechium edule HOM05D007731 ORTHO05D008483 1.0e-25 121.3 219 40.2
ClCG08G014190 Citrullus lanatus HOM05D007731 ORTHO05D008483 1.7e-25 120.6 255 38.4
Actinidia16998 Actinidia chinensis HOM05D007731 ORTHO05D008483 3.9e-25 119.4 245 43.7
VMungo1309G0548 Vigna mungo HOM05D007731 ORTHO05D008483 6.6e-25 118.6 250 42.0
Phvul.009G009600 Phaseolus vulgaris HOM05D007731 ORTHO05D008483 3.3e-24 116.3 253 40.7
MSTRG.25262 Avicennia marina HOM05D007731 ORTHO05D008483 1.2e-23 114.4 179 46.9
Lalb_Chr23g0266081 Lupinus albus HOM05D007731 ORTHO05D008483 1.2e-23 114.4 178 42.7
Gohir.D01G097000 Gossypium hirsutum HOM05D007731 ORTHO05D008483 2.1e-23 113.6 255 40.0
Gorai.002G122700 Gossypium raimondii HOM05D007731 ORTHO05D008483 2.8e-23 113.2 255 40.0
Glyma.04G023500 Glycine max HOM05D007731 ORTHO05D008483 3.6e-23 112.8 253 39.9
Cc00_g29330 Coffea canephora HOM05D007731 ORTHO05D008483 4.7e-23 112.5 279 39.1
CsaV3_2G024250 Cucumis sativus L. HOM05D007731 ORTHO05D008483 4.7e-23 112.5 174 46.0
Eucgr.H00961 Eucalyptus grandis HOM05D007731 ORTHO05D008483 1.1e-22 111.3 200 42.0
Lj1g0026139 Lotus japonicus HOM05D007731 ORTHO05D008483 1.2e-21 107.8 263 39.9
PSO541G3821 Papaver somniferum HOM05D007731 ORTHO05D008483 8.4e-20 101.7 108 52.8
Gohir.A02G083100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 1.9e-19 100.5 188 42.0
Lsat_1_v5_gn_8_30081 Lactuca sativa HOM05D007731 ORTHO05D008483 1.9e-19 100.5 155 50.3
Psat0s2878g0040 Pisum sativum HOM05D007731 ORTHO05D008483 5.4e-19 99.0 251 34.7
Aqoxy6G02285 Aquilegia oxysepala HOM05D007731 ORTHO05D008483 7.1e-19 98.6 179 42.5
Dinv31866 Davidia involucrata HOM05D000068 ORTHO05D000084 7.1e-19 98.6 186 44.6
Rhsim06G0016400 Rhododendron simsii HOM05D007731 ORTHO05D008483 1.6e-18 97.4 239 38.5
TPR.G34549 Trifolium pratense HOM05D007731 ORTHO05D008483 1.6e-18 97.4 160 45.6
ECA233G0921 Erigeron canadensis HOM05D007731 ORTHO05D008483 2.1e-18 97.1 188 39.4
Ca_15482_v3 Cicer arietinum L. HOM05D007731 ORTHO05D008483 2.7e-18 96.7 121 55.4
PGR031G1853 Punica granatum HOM05D007731 ORTHO05D008483 2.7e-18 96.7 161 44.1
Sc15g0004830 Simmondsia chinensis HOM05D007731 ORTHO05D008483 1.3e-17 94.4 248 37.5
Gohir.D02G098500 Gossypium hirsutum HOM05D007731 ORTHO05D008483 1.7e-17 94.0 182 41.8
Gorai.005G112400 Gossypium raimondii HOM05D007731 ORTHO05D008483 1.7e-17 94.0 182 41.8
Rhsim06G0019700 Rhododendron simsii HOM05D007731 ORTHO05D008483 3.9e-17 92.8 232 37.9
PGSC0003DMG400009876 Solanum tuberosum HOM05D007731 ORTHO05D008483 1.5e-16 90.9 293 33.4
Glyma.06G023400 Glycine max HOM05D007731 ORTHO05D008483 1.2e-15 87.8 228 37.7
Medtr3g113660 Medicago truncatula HOM05D007731 ORTHO05D008483 3.6e-15 86.3 161 41.0
arahy.Tifrunner.gnm1.ann1.3IU0NQ Arachis hypogaea HOM05D007731 ORTHO05D008483 1.1e-14 84.7 184 38.6
arahy.Tifrunner.gnm1.ann1.WY2XWP Arachis hypogaea HOM05D007731 ORTHO05D008483 1.8e-14 84.0 159 40.9
Sopen04g035340 Solanum pennellii HOM05D007731 ORTHO05D008483 5.2e-14 82.4 121 45.5
ClCG05G015580 Citrullus lanatus HOM05D007731 ORTHO05D008483 8.4e-12 75.1 63 68.3
SGA_v2.0_scaffold92G28205 Striga asiatica HOM05D007731 ORTHO05D008483 1.4e-11 74.3 251 34.7
DCAR_013881 Daucus carota HOM05D007731 ORTHO05D008483 1.9e-11 73.9 154 39.0
Migut.C00858 Erythranthe guttata HOM05D007731 ORTHO05D008483 2.4e-11 73.6 162 40.7
AUR62041477 Chenopodium quinoa HOM05D007731 ORTHO05D008483 3.2e-11 73.2 145 38.6
CsaV3_3G045970 Cucumis sativus L. HOM05D007731 ORTHO05D008483 5.4e-11 72.4 162 38.3
MELO3C003742.2 Cucumis melo HOM05D007731 ORTHO05D008483 1.6e-10 70.9 64 64.1
BcaB07g32022 Brassica carinata HOM05D009961 ORTHO05D008483 2.3e-09 67.0 47 66.0
BraA06t24726Z Brassica rapa HOM05D009961 ORTHO05D008483 3.9e-09 66.2 47 66.0
BcaC05g25901 Brassica carinata HOM05D009961 ORTHO05D008483 5.1e-09 65.9 47 66.0
A06p16220 Brassica napus HOM05D009961 ORTHO05D008483 5.1e-09 65.9 47 66.0
C05p18560 Brassica napus HOM05D009961 ORTHO05D008483 5.1e-09 65.9 47 66.0
BolC5t30567H Brassica oleracea HOM05D009961 ORTHO05D008483 5.1e-09 65.9 47 66.0
Lalb_Chr19g0131461 Lupinus albus HOM05D007731 ORTHO05D008483 5.1e-09 65.9 67 50.7
Carub.0001s1960 Capsella rubella HOM05D009961 ORTHO05D008483 6.6e-09 65.5 47 61.7
THA.LOC104811421 Tarenaya hassleriana HOM05D009961 ORTHO05D008483 6.6e-09 65.5 45 71.1
Ah.11g039950 Amaranthus hybridus HOM05D047386 ORTHO05D008483 1.9e-08 63.9 191 35.6
BcaB03g14337 Brassica carinata HOM05D009961 ORTHO05D008483 1.9e-08 63.9 47 61.7
A07p16020 Brassica napus HOM05D009961 ORTHO05D008483 4.3e-08 62.8 47 61.7
BraA07t29330Z Brassica rapa HOM05D009961 ORTHO05D008483 4.3e-08 62.8 47 61.7
AT1G20070 Arabidopsis thaliana HOM05D009961 ORTHO05D008483 7.3e-08 62.0 47 59.6
BolC7t42871H Brassica oleracea HOM05D009961 ORTHO05D008483 9.6e-08 61.6 46 58.7
Potri.008G198000 Populus trichocarpa HOM05D001921 ORTHO05D001784 1.3e-07 61.2 97 37.1
MBI18_g10965_MAGBIO Magnolia biondii HOM05D001921 ORTHO05D001784 2.1e-07 60.5 122 37.7
CARHR020550 Cardamine hirsuta HOM05D009961 ORTHO05D008483 2.8e-07 60.1 47 59.6
TAR362G1200 Trochodendron aralioides HOM05D001921 ORTHO05D001784 3.6e-07 59.7 87 40.2
TAR365G0872 Trochodendron aralioides HOM05D001921 ORTHO05D001784 6.2e-07 58.9 89 39.3
Duzib151G0850 Durio zibethinus HOM05D001921 ORTHO05D001784 8.1e-07 58.5 89 37.1
AL1G32880 Arabidopsis lyrata HOM05D009961 ORTHO05D008483 1.1e-06 58.2 47 55.3
Gohir.A10G105100 Gossypium hirsutum HOM05D001921 ORTHO05D001784 1.1e-06 58.2 87 37.9
Gohir.D10G163601 Gossypium hirsutum HOM05D001921 ORTHO05D001784 1.1e-06 58.2 87 37.9
Aa31LG7G4510 Aethionema arabicum HOM05D009961 ORTHO05D008483 1.4e-06 57.8 48 58.3
ATR0712G013 Amborella trichopoda HOM05D007731 ORTHO05D008483 1.4e-06 57.8 184 28.8
arahy.Tifrunner.gnm1.ann1.288BMH Arachis hypogaea HOM05D001921 ORTHO05D001784 1.4e-06 57.8 90 36.7
arahy.Tifrunner.gnm1.ann1.XA6I97 Arachis hypogaea HOM05D001921 ORTHO05D001784 1.4e-06 57.8 90 36.7
Gorai.011G182400 Gossypium raimondii HOM05D001921 ORTHO05D001784 1.4e-06 57.8 87 37.9
Sp1g17840 Schrenkiella parvula HOM05D009961 ORTHO05D008483 1.4e-06 57.8 48 58.3
Thhalv10008606m.g Eutrema salsugineum HOM05D009961 ORTHO05D008483 3.1e-06 56.6 48 58.3
VMungo0540G1436 Vigna mungo HOM05D001921 ORTHO05D001784 3.1e-06 56.6 143 29.4
Potri.010G027500 Populus trichocarpa HOM05D001921 ORTHO05D001784 5.3e-06 55.8 96 35.4
QL06p006408 Quercus lobata HOM05D001921 ORTHO05D001784 5.3e-06 55.8 135 31.1
Phvul.006G158900 Phaseolus vulgaris HOM05D001921 ORTHO05D001784 6.9e-06 55.5 149 32.2


User provided reference genes

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